RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 KMT2AQ03164 3969 aa7.76□□□□□ -1.17
PTPRN-204ENST00000423636 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
PTPRN-204ENST00000423636 Q8N9L7 120 aa7.75□□□□□ -1.17
PTPRN-204ENST00000423636 C3orf84H3BNL1 204 aa7.74□□□□□ -1.17
PTPRN-204ENST00000423636 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
PTPRN-204ENST00000423636 H3BNG1 76 aa7.74□□□□□ -1.17
PTPRN-204ENST00000423636 CCKP06307 115 aa7.74□□□□□ -1.17
PTPRN-204ENST00000423636 DNAH10OSP0CZ25 163 aa7.74□□□□□ -1.17
PTPRN-204ENST00000423636 M0R378 163 aa7.73□□□□□ -1.17
PTPRN-204ENST00000423636 ACYP1P07311 99 aa7.73□□□□□ -1.17
PTPRN-204ENST00000423636 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
PTPRN-204ENST00000423636 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
PTPRN-204ENST00000423636 GVQW2A0A096LPI5 108 aaPredicted RBP7.72□□□□□ -1.17
PTPRN-204ENST00000423636 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
PTPRN-204ENST00000423636 LOC107984640A0A0U1RRK4 108 aa7.72□□□□□ -1.17
PTPRN-204ENST00000423636 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
PTPRN-204ENST00000423636 OBSCN-AS1Q96MR7 158 aa7.71□□□□□ -1.18
PTPRN-204ENST00000423636 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
PTPRN-204ENST00000423636 PPDPFQ9H3Y8 114 aa7.7□□□□□ -1.18
PTPRN-204ENST00000423636 TRBV7-7A0A0K0K1E9 115 aa7.7□□□□□ -1.18
PTPRN-204ENST00000423636 A0A1B0GX51 115 aa7.7□□□□□ -1.18
PTPRN-204ENST00000423636 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
PTPRN-204ENST00000423636 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
PTPRN-204ENST00000423636 PRLHP81277 87 aa7.7□□□□□ -1.18
PTPRN-204ENST00000423636 A0A096LNI7 61 aa7.69□□□□□ -1.18
PTPRN-204ENST00000423636 JMJD7-PLA2G4BH0Y9G9 81 aa7.69□□□□□ -1.18
PTPRN-204ENST00000423636 UBE2BP63146 152 aa7.69□□□□□ -1.18
PTPRN-204ENST00000423636 Q6ZQT0 140 aa7.68□□□□□ -1.18
PTPRN-204ENST00000423636 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
PTPRN-204ENST00000423636 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
PTPRN-204ENST00000423636 MUC7Q8TAX7 377 aa7.67□□□□□ -1.18
PTPRN-204ENST00000423636 Q9BRP9 147 aa7.66□□□□□ -1.18
PTPRN-204ENST00000423636 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
PTPRN-204ENST00000423636 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
PTPRN-204ENST00000423636 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
PTPRN-204ENST00000423636 DEFB116Q30KQ4 102 aa7.66□□□□□ -1.18
PTPRN-204ENST00000423636 Q6Q795 121 aa7.66□□□□□ -1.18
PTPRN-204ENST00000423636 FRAS1Q86XX4 4008 aa7.65□□□□□ -1.18
PTPRN-204ENST00000423636 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
PTPRN-204ENST00000423636 Q6ZVQ6 151 aa7.64□□□□□ -1.19
PTPRN-204ENST00000423636 KRTAP11-1Q8IUC1 163 aa7.64□□□□□ -1.19
PTPRN-204ENST00000423636 UPK3BQ9BT76 320 aa7.64□□□□□ -1.19
PTPRN-204ENST00000423636 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
PTPRN-204ENST00000423636 Q8N377 158 aa7.63□□□□□ -1.19
PTPRN-204ENST00000423636 PANO1I0J062 215 aa7.63□□□□□ -1.19
PTPRN-204ENST00000423636 MRPL55Q7Z7F7 128 aaKnown RBP7.63□□□□□ -1.19
PTPRN-204ENST00000423636 LINC01547P58512 204 aaPredicted RBP7.62□□□□□ -1.19
PTPRN-204ENST00000423636 BPY2O14599 106 aa7.61□□□□□ -1.19
PTPRN-204ENST00000423636 Q6JHZ5 121 aa7.61□□□□□ -1.19
PTPRN-204ENST00000423636 GHRHP01286 108 aa7.6□□□□□ -1.19
PTPRN-204ENST00000423636 APLNQ9ULZ1 77 aa7.6□□□□□ -1.19
PTPRN-204ENST00000423636 IGLV1-50A0A075B6I6 118 aa7.6□□□□□ -1.19
PTPRN-204ENST00000423636 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.19
PTPRN-204ENST00000423636 Q6ZRX8 168 aa7.57□□□□□ -1.2
PTPRN-204ENST00000423636 RMI2Q96E14 147 aa7.57□□□□□ -1.2
PTPRN-204ENST00000423636 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
PTPRN-204ENST00000423636 SNURFQ9Y675 71 aa7.56□□□□□ -1.2
PTPRN-204ENST00000423636 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
PTPRN-204ENST00000423636 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
PTPRN-204ENST00000423636 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
PTPRN-204ENST00000423636 DNAH2Q9P225 4427 aa7.55□□□□□ -1.2
PTPRN-204ENST00000423636 VPS13DQ5THJ4 4388 aa7.54□□□□□ -1.2
PTPRN-204ENST00000423636 UQCRQO14949 82 aa7.53□□□□□ -1.2
PTPRN-204ENST00000423636 NREPQ16612 68 aa7.53□□□□□ -1.2
PTPRN-204ENST00000423636 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
PTPRN-204ENST00000423636 COX7CP15954 63 aa7.53□□□□□ -1.2
PTPRN-204ENST00000423636 B9D2Q9BPU9 175 aa7.53□□□□□ -1.2
PTPRN-204ENST00000423636 C1orf137Q5JT78 98 aa7.52□□□□□ -1.21
PTPRN-204ENST00000423636 DNAH6Q9C0G6 4158 aa7.52□□□□□ -1.21
PTPRN-204ENST00000423636 ATOX1O00244 68 aa7.52□□□□□ -1.21
PTPRN-204ENST00000423636 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
PTPRN-204ENST00000423636 A0A1W2PNM2 257 aa7.52□□□□□ -1.21
PTPRN-204ENST00000423636 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
PTPRN-204ENST00000423636 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
PTPRN-204ENST00000423636 J3KT08 172 aa7.5□□□□□ -1.21
PTPRN-204ENST00000423636 HRCT1Q6UXD1 115 aa7.5□□□□□ -1.21
PTPRN-204ENST00000423636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
PTPRN-204ENST00000423636 TLX1NBP0CAT3 122 aa7.5□□□□□ -1.21
PTPRN-204ENST00000423636 HECTD4Q9Y4D8 3996 aa7.49□□□□□ -1.21
PTPRN-204ENST00000423636 C16orf90A8MZG2 172 aa7.48□□□□□ -1.21
PTPRN-204ENST00000423636 LY6G6CO95867 125 aa7.48□□□□□ -1.21
PTPRN-204ENST00000423636 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
PTPRN-204ENST00000423636 SERP2Q8N6R1 65 aa7.48□□□□□ -1.21
PTPRN-204ENST00000423636 HYDINQ4G0P3 5121 aa7.48□□□□□ -1.21
PTPRN-204ENST00000423636 EPM2AB3EWF7 344 aa7.47□□□□□ -1.21
PTPRN-204ENST00000423636 PRYO14603 147 aa7.47□□□□□ -1.21
PTPRN-204ENST00000423636 LINC00476Q8WZB0 136 aa7.47□□□□□ -1.21
PTPRN-204ENST00000423636 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
PTPRN-204ENST00000423636 DHRS4-AS1Q9P1J3 65 aa7.47□□□□□ -1.21
PTPRN-204ENST00000423636 UBE2AP49459 152 aa7.46□□□□□ -1.21
PTPRN-204ENST00000423636 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
PTPRN-204ENST00000423636 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
PTPRN-204ENST00000423636 A0A087WSZ3 146 aa7.45□□□□□ -1.22
PTPRN-204ENST00000423636 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
PTPRN-204ENST00000423636 SPRR1AP35321 89 aa7.45□□□□□ -1.22
PTPRN-204ENST00000423636 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
PTPRN-204ENST00000423636 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
PTPRN-204ENST00000423636 DNAH11Q96DT5 4516 aa7.43□□□□□ -1.22
PTPRN-204ENST00000423636 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
PTPRN-204ENST00000423636 F8WEM9 126 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms