RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 Q6JHZ5 121 aa8.74□□□□□ -1.01
MCF2L-213ENST00000421756 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
MCF2L-213ENST00000421756 UBE2DNLQ8IWF7 75 aa8.73□□□□□ -1.01
MCF2L-213ENST00000421756 TGP01266 2768 aa8.73□□□□□ -1.01
MCF2L-213ENST00000421756 UBE2BP63146 152 aa8.73□□□□□ -1.01
MCF2L-213ENST00000421756 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
MCF2L-213ENST00000421756 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
MCF2L-213ENST00000421756 Q6ZVQ6 151 aa8.72□□□□□ -1.01
MCF2L-213ENST00000421756 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
MCF2L-213ENST00000421756 TRAV10A0A0B4J240 114 aa8.71□□□□□ -1.01
MCF2L-213ENST00000421756 ATOX1O00244 68 aa8.71□□□□□ -1.01
MCF2L-213ENST00000421756 UQCRQO14949 82 aa8.71□□□□□ -1.01
MCF2L-213ENST00000421756 COX7CP15954 63 aa8.71□□□□□ -1.01
MCF2L-213ENST00000421756 A0A096LNI7 61 aa8.71□□□□□ -1.02
MCF2L-213ENST00000421756 ETDCA0A1B0GVM5 59 aa8.7□□□□□ -1.02
MCF2L-213ENST00000421756 WIPF1O43516 503 aa8.7□□□□□ -1.02
MCF2L-213ENST00000421756 LINC01547P58512 204 aaPredicted RBP8.7□□□□□ -1.02
MCF2L-213ENST00000421756 ELOF1P60002 83 aaKnown RBP8.7□□□□□ -1.02
MCF2L-213ENST00000421756 SNURFQ9Y675 71 aa8.7□□□□□ -1.02
MCF2L-213ENST00000421756 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
MCF2L-213ENST00000421756 LINC00167Q96N53 147 aa8.69□□□□□ -1.02
MCF2L-213ENST00000421756 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-213ENST00000421756 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
MCF2L-213ENST00000421756 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
MCF2L-213ENST00000421756 HIGD2AQ9BW72 106 aa8.68□□□□□ -1.02
MCF2L-213ENST00000421756 PRLHP81277 87 aa8.67□□□□□ -1.02
MCF2L-213ENST00000421756 BPY2O14599 106 aa8.66□□□□□ -1.02
MCF2L-213ENST00000421756 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
MCF2L-213ENST00000421756 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
MCF2L-213ENST00000421756 C2orf48Q96LS8 159 aa8.66□□□□□ -1.02
MCF2L-213ENST00000421756 SERP2Q8N6R1 65 aa8.65□□□□□ -1.02
MCF2L-213ENST00000421756 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
MCF2L-213ENST00000421756 H3BNG1 76 aa8.65□□□□□ -1.02
MCF2L-213ENST00000421756 CMYA5Q8N3K9 4069 aa8.64□□□□□ -1.03
MCF2L-213ENST00000421756 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
MCF2L-213ENST00000421756 NREPQ16612 68 aa8.64□□□□□ -1.03
MCF2L-213ENST00000421756 MDFIQ99750 246 aa8.63□□□□□ -1.03
MCF2L-213ENST00000421756 Q8N377 158 aa8.62□□□□□ -1.03
MCF2L-213ENST00000421756 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
MCF2L-213ENST00000421756 Q9BRP9 147 aa8.61□□□□□ -1.03
MCF2L-213ENST00000421756 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
MCF2L-213ENST00000421756 KRTAP7-1Q8IUC3 87 aa8.59□□□□□ -1.03
MCF2L-213ENST00000421756 TM2D3Q9BRN9 247 aa8.59□□□□□ -1.03
MCF2L-213ENST00000421756 RMI2Q96E14 147 aa8.58□□□□□ -1.04
MCF2L-213ENST00000421756 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
MCF2L-213ENST00000421756 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
MCF2L-213ENST00000421756 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
MCF2L-213ENST00000421756 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
MCF2L-213ENST00000421756 Q6ZRX8 168 aa8.55□□□□□ -1.04
MCF2L-213ENST00000421756 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
MCF2L-213ENST00000421756 IGLV1-50A0A075B6I6 118 aa8.55□□□□□ -1.04
MCF2L-213ENST00000421756 CRYGAP11844 174 aa8.53□□□□□ -1.04
MCF2L-213ENST00000421756 ATP5EP2Q5VTU8 51 aa8.52□□□□□ -1.04
MCF2L-213ENST00000421756 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.04
MCF2L-213ENST00000421756 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
MCF2L-213ENST00000421756 PDE6GP18545 87 aa8.52□□□□□ -1.05
MCF2L-213ENST00000421756 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
MCF2L-213ENST00000421756 A0A1W2PNM2 257 aa8.5□□□□□ -1.05
MCF2L-213ENST00000421756 F8WEM9 126 aa8.5□□□□□ -1.05
MCF2L-213ENST00000421756 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
MCF2L-213ENST00000421756 DHRS4-AS1Q9P1J3 65 aa8.48□□□□□ -1.05
MCF2L-213ENST00000421756 DNAH9Q9NYC9 4486 aa8.48□□□□□ -1.05
MCF2L-213ENST00000421756 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
MCF2L-213ENST00000421756 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
MCF2L-213ENST00000421756 PRR4Q16378 134 aa8.47□□□□□ -1.05
MCF2L-213ENST00000421756 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
MCF2L-213ENST00000421756 A0A087WSZ3 146 aa8.46□□□□□ -1.05
MCF2L-213ENST00000421756 TRBV7-6A0A0J9YX20 115 aa8.46□□□□□ -1.06
MCF2L-213ENST00000421756 PANO1I0J062 215 aa8.46□□□□□ -1.06
MCF2L-213ENST00000421756 UBE2AP49459 152 aa8.45□□□□□ -1.06
MCF2L-213ENST00000421756 LINC00476Q8WZB0 136 aa8.45□□□□□ -1.06
MCF2L-213ENST00000421756 J3KT08 172 aa8.45□□□□□ -1.06
MCF2L-213ENST00000421756 SMIM29Q86T20 159 aa8.45□□□□□ -1.06
MCF2L-213ENST00000421756 PRYO14603 147 aa8.44□□□□□ -1.06
MCF2L-213ENST00000421756 OXTP01178 125 aa8.44□□□□□ -1.06
MCF2L-213ENST00000421756 CXCL6P80162 114 aa8.44□□□□□ -1.06
MCF2L-213ENST00000421756 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
MCF2L-213ENST00000421756 IGKV4-1P06312 121 aa8.43□□□□□ -1.06
MCF2L-213ENST00000421756 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
MCF2L-213ENST00000421756 K7EQZ3 153 aa8.43□□□□□ -1.06
MCF2L-213ENST00000421756 LRCOL1A6NCL2 159 aa8.42□□□□□ -1.06
MCF2L-213ENST00000421756 PLECQ15149 4684 aaKnown RBP8.42□□□□□ -1.06
MCF2L-213ENST00000421756 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
MCF2L-213ENST00000421756 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-213ENST00000421756 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
MCF2L-213ENST00000421756 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
MCF2L-213ENST00000421756 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
MCF2L-213ENST00000421756 EPM2AB3EWF7 344 aa8.41□□□□□ -1.06
MCF2L-213ENST00000421756 H3BQ85 93 aa8.41□□□□□ -1.06
MCF2L-213ENST00000421756 TMEM258P61165 79 aa8.41□□□□□ -1.06
MCF2L-213ENST00000421756 FBN3Q75N90 2809 aa8.4□□□□□ -1.06
MCF2L-213ENST00000421756 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.06
MCF2L-213ENST00000421756 FAM236CP0DP71 79 aa8.4□□□□□ -1.06
MCF2L-213ENST00000421756 MEGF8Q7Z7M0 2845 aa8.4□□□□□ -1.07
MCF2L-213ENST00000421756 C16orf90A8MZG2 172 aa8.4□□□□□ -1.07
MCF2L-213ENST00000421756 IGFL1Q6UW32 110 aa8.39□□□□□ -1.07
MCF2L-213ENST00000421756 Q8NBF4 154 aa8.39□□□□□ -1.07
MCF2L-213ENST00000421756 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
MCF2L-213ENST00000421756 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
MCF2L-213ENST00000421756 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms