RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
SSBP3-206ENST00000420121 IGKV2D-26A0A0A0MRZ7 120 aa6.36□□□□□ -1.39
SSBP3-206ENST00000420121 PRYO14603 147 aa6.36□□□□□ -1.39
SSBP3-206ENST00000420121 NCR3O14931 201 aa6.36□□□□□ -1.39
SSBP3-206ENST00000420121 LEPROTL1O95214 131 aa6.36□□□□□ -1.39
SSBP3-206ENST00000420121 SNHG12Q9BXW3 62 aa6.36□□□□□ -1.39
SSBP3-206ENST00000420121 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
SSBP3-206ENST00000420121 LOC107984156A0A0G2JMH3 177 aa6.35□□□□□ -1.39
SSBP3-206ENST00000420121 C20orf202A1L168 122 aa6.35□□□□□ -1.39
SSBP3-206ENST00000420121 COLCA2A8K830 154 aa6.35□□□□□ -1.39
SSBP3-206ENST00000420121 LEPROTO15243 131 aa6.35□□□□□ -1.39
SSBP3-206ENST00000420121 ARL17AQ8IVW1 177 aa6.35□□□□□ -1.39
SSBP3-206ENST00000420121 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
SSBP3-206ENST00000420121 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
SSBP3-206ENST00000420121 MYMXA0A1B0GTQ4 84 aa6.34□□□□□ -1.39
SSBP3-206ENST00000420121 K7ERU9 68 aa6.34□□□□□ -1.39
SSBP3-206ENST00000420121 DAND5Q8N907 189 aa6.34□□□□□ -1.39
SSBP3-206ENST00000420121 MUC17Q685J3 4493 aa6.34□□□□□ -1.4
SSBP3-206ENST00000420121 SMCR5Q8TEV8 140 aa6.33□□□□□ -1.4
SSBP3-206ENST00000420121 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
SSBP3-206ENST00000420121 J3QQQ9 107 aa6.32□□□□□ -1.4
SSBP3-206ENST00000420121 FABP4P15090 132 aa6.32□□□□□ -1.4
SSBP3-206ENST00000420121 PLNP26678 52 aa6.32□□□□□ -1.4
SSBP3-206ENST00000420121 VAMP3Q15836 100 aa6.32□□□□□ -1.4
SSBP3-206ENST00000420121 DPM2O94777 84 aa6.31□□□□□ -1.4
SSBP3-206ENST00000420121 TPRXLQ17RH7 258 aa6.31□□□□□ -1.4
SSBP3-206ENST00000420121 MAP1LC3CQ9BXW4 147 aa6.31□□□□□ -1.4
SSBP3-206ENST00000420121 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
SSBP3-206ENST00000420121 TRBV10-2A0A0K0K1G8 114 aa6.3□□□□□ -1.4
SSBP3-206ENST00000420121 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
SSBP3-206ENST00000420121 IGKCP01834 107 aa6.3□□□□□ -1.4
SSBP3-206ENST00000420121 LINC00483Q53H64 154 aa6.3□□□□□ -1.4
SSBP3-206ENST00000420121 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
SSBP3-206ENST00000420121 SOSTDC1Q6X4U4 206 aa6.3□□□□□ -1.4
SSBP3-206ENST00000420121 ZNF706Q9Y5V0 76 aaPredicted RBP6.3□□□□□ -1.4
SSBP3-206ENST00000420121 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
SSBP3-206ENST00000420121 NMUP48645 174 aa6.29□□□□□ -1.4
SSBP3-206ENST00000420121 UBE2V1Q13404 147 aa6.29□□□□□ -1.4
SSBP3-206ENST00000420121 Q9BRP9 147 aa6.29□□□□□ -1.4
SSBP3-206ENST00000420121 PRO1933Q9H354 126 aa6.29□□□□□ -1.4
SSBP3-206ENST00000420121 PPDPFQ9H3Y8 114 aa6.29□□□□□ -1.4
SSBP3-206ENST00000420121 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
SSBP3-206ENST00000420121 TRIAP1O43715 76 aa6.28□□□□□ -1.4
SSBP3-206ENST00000420121 IGLV6-57P01721 117 aa6.28□□□□□ -1.4
SSBP3-206ENST00000420121 COL5A1-AS1Q5SY13 56 aa6.28□□□□□ -1.4
SSBP3-206ENST00000420121 ADAMTSL4-AS1Q5T5F5 129 aa6.28□□□□□ -1.4
SSBP3-206ENST00000420121 A0A0J9YXY3 114 aa6.27□□□□□ -1.41
SSBP3-206ENST00000420121 E9PLD3 99 aa6.27□□□□□ -1.41
SSBP3-206ENST00000420121 NDUFC2O95298 119 aa6.27□□□□□ -1.41
SSBP3-206ENST00000420121 LGALS3P17931 250 aaKnown RBP6.27□□□□□ -1.41
SSBP3-206ENST00000420121 HERVK_113P61574 105 aa6.27□□□□□ -1.41
SSBP3-206ENST00000420121 SPAG11AQ6PDA7 123 aa6.27□□□□□ -1.41
SSBP3-206ENST00000420121 Q8NBF4 154 aa6.27□□□□□ -1.41
SSBP3-206ENST00000420121 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
SSBP3-206ENST00000420121 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 Q6ZRX8 168 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 LITAFQ99732 161 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
SSBP3-206ENST00000420121 SYS1-DBNDD2H3BUS1 97 aa6.25□□□□□ -1.41
SSBP3-206ENST00000420121 GAGE2AQ6NT46 116 aa6.25□□□□□ -1.41
SSBP3-206ENST00000420121 NPC2P61916 151 aa6.24□□□□□ -1.41
SSBP3-206ENST00000420121 JOSD1Q15040 202 aaPredicted RBP6.24□□□□□ -1.41
SSBP3-206ENST00000420121 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
SSBP3-206ENST00000420121 FP248Q71RG6 208 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-206ENST00000420121 MIEN1Q9BRT3 115 aa6.23□□□□□ -1.41
SSBP3-206ENST00000420121 TRAV23DV6A0A075B6W5 121 aa6.22□□□□□ -1.41
SSBP3-206ENST00000420121 SPINK1P00995 79 aa6.22□□□□□ -1.41
SSBP3-206ENST00000420121 MOBPQ13875 183 aa6.22□□□□□ -1.41
SSBP3-206ENST00000420121 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
SSBP3-206ENST00000420121 S100A7L2Q5SY68 101 aa6.22□□□□□ -1.41
SSBP3-206ENST00000420121 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.41
SSBP3-206ENST00000420121 IGLV9-49A0A0B4J1Y8 123 aa6.21□□□□□ -1.42
SSBP3-206ENST00000420121 ZNF73O43830 326 aaPredicted RBP6.21□□□□□ -1.42
SSBP3-206ENST00000420121 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
SSBP3-206ENST00000420121 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 TIMM17BO60830 172 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 SEC61GP60059 68 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 Q8N377 158 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 LINC00308Q8TCZ7 52 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 TTTY13Q9BZ97 58 aa6.2□□□□□ -1.42
SSBP3-206ENST00000420121 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
SSBP3-206ENST00000420121 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
SSBP3-206ENST00000420121 HIST3H2BBQ8N257 126 aa6.19□□□□□ -1.42
SSBP3-206ENST00000420121 ST20-AS1Q8NBB2 130 aa6.19□□□□□ -1.42
SSBP3-206ENST00000420121 SPANXCQ9NY87 97 aa6.19□□□□□ -1.42
SSBP3-206ENST00000420121 COA6Q5JTJ3 125 aaKnown RBP6.18□□□□□ -1.42
SSBP3-206ENST00000420121 SS18L2Q9UHA2 77 aa6.18□□□□□ -1.42
SSBP3-206ENST00000420121 ZNF815PA8K554 130 aa6.16□□□□□ -1.42
SSBP3-206ENST00000420121 SPRR1BP22528 89 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms