RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 WIPF1O43516 503 aa5.66□□□□□ -1.5
UBR4-206ENST00000419533 LINC00313P59037 77 aa5.66□□□□□ -1.5
UBR4-206ENST00000419533 DSPP15924 2871 aaKnown RBP5.65□□□□□ -1.5
UBR4-206ENST00000419533 C4orf26Q17RF5 130 aa5.65□□□□□ -1.51
UBR4-206ENST00000419533 FAM218AQ96MZ4 157 aa5.65□□□□□ -1.51
UBR4-206ENST00000419533 SMIM29Q86T20 159 aa5.64□□□□□ -1.51
UBR4-206ENST00000419533 PSPHP1O15172 72 aa5.64□□□□□ -1.51
UBR4-206ENST00000419533 VPREB1P12018 145 aa5.64□□□□□ -1.51
UBR4-206ENST00000419533 LOC110117498A0A087WWA1 95 aa5.64□□□□□ -1.51
UBR4-206ENST00000419533 ST20-AS1Q8NBB2 130 aa5.64□□□□□ -1.51
UBR4-206ENST00000419533 MGAQ8IWI9 3026 aa5.63□□□□□ -1.51
UBR4-206ENST00000419533 LINC00336Q6ZUF6 198 aa5.63□□□□□ -1.51
UBR4-206ENST00000419533 PRRC2CQ9Y520 2896 aaKnown RBP5.62□□□□□ -1.51
UBR4-206ENST00000419533 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 IGLV6-57P01721 117 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 Q6ZQT0 140 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 LITAFQ99732 161 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
UBR4-206ENST00000419533 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
UBR4-206ENST00000419533 A0A087WTM6 91 aa5.61□□□□□ -1.51
UBR4-206ENST00000419533 C8orf87E5RJ46 101 aa5.61□□□□□ -1.51
UBR4-206ENST00000419533 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
UBR4-206ENST00000419533 TRIOO75962 3097 aa5.61□□□□□ -1.51
UBR4-206ENST00000419533 ACYP2P14621 99 aa5.6□□□□□ -1.51
UBR4-206ENST00000419533 Q96NJ1 140 aa5.6□□□□□ -1.51
UBR4-206ENST00000419533 TRBV7-4A0A0J9YYF1 115 aa5.6□□□□□ -1.51
UBR4-206ENST00000419533 H3BPC8 53 aa5.6□□□□□ -1.51
UBR4-206ENST00000419533 SERTAD4-AS1Q5TG53 156 aa5.6□□□□□ -1.51
UBR4-206ENST00000419533 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
UBR4-206ENST00000419533 LAMA2P24043 3122 aaKnown RBP5.6□□□□□ -1.51
UBR4-206ENST00000419533 SPAG11AQ6PDA7 123 aa5.59□□□□□ -1.51
UBR4-206ENST00000419533 GCN1Q92616 2671 aaKnown RBP5.59□□□□□ -1.51
UBR4-206ENST00000419533 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
UBR4-206ENST00000419533 APLNQ9ULZ1 77 aa5.58□□□□□ -1.52
UBR4-206ENST00000419533 UNC80Q8N2C7 3258 aa5.58□□□□□ -1.52
UBR4-206ENST00000419533 MUC4Q99102 2169 aa5.57□□□□□ -1.52
UBR4-206ENST00000419533 ZNF861PO60384 105 aa5.57□□□□□ -1.52
UBR4-206ENST00000419533 LINC00304Q8N9R0 145 aa5.57□□□□□ -1.52
UBR4-206ENST00000419533 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
UBR4-206ENST00000419533 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
UBR4-206ENST00000419533 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
UBR4-206ENST00000419533 TRAV22A0A0B4J277 110 aa5.56□□□□□ -1.52
UBR4-206ENST00000419533 A8MWP4 228 aa5.56□□□□□ -1.52
UBR4-206ENST00000419533 PLA2G2DQ9UNK4 145 aa5.55□□□□□ -1.52
UBR4-206ENST00000419533 A0A1B0GU69 56 aa5.55□□□□□ -1.52
UBR4-206ENST00000419533 LINC00528Q8N1L1 170 aa5.54□□□□□ -1.52
UBR4-206ENST00000419533 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
UBR4-206ENST00000419533 ATRQ13535 2644 aa5.54□□□□□ -1.52
UBR4-206ENST00000419533 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
UBR4-206ENST00000419533 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
UBR4-206ENST00000419533 SPTBN5Q9NRC6 3674 aaKnown RBP5.54□□□□□ -1.52
UBR4-206ENST00000419533 CENPEQ02224 2701 aa5.54□□□□□ -1.52
UBR4-206ENST00000419533 CASC10Q5T4H9 136 aa5.53□□□□□ -1.52
UBR4-206ENST00000419533 CFAP54Q96N23 3096 aa5.53□□□□□ -1.52
UBR4-206ENST00000419533 C9orf129Q5T035 196 aaKnown RBP5.53□□□□□ -1.52
UBR4-206ENST00000419533 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
UBR4-206ENST00000419533 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
UBR4-206ENST00000419533 TEP1Q99973 2627 aaKnown RBP5.53□□□□□ -1.52
UBR4-206ENST00000419533 MAST4O15021 2626 aa5.53□□□□□ -1.52
UBR4-206ENST00000419533 SMR3BP02814 79 aaPredicted RBP5.52□□□□□ -1.53
UBR4-206ENST00000419533 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
UBR4-206ENST00000419533 WDFY4Q6ZS81 3184 aa5.52□□□□□ -1.53
UBR4-206ENST00000419533 XIRP2A4UGR9 3374 aa5.52□□□□□ -1.53
UBR4-206ENST00000419533 IGLV7-43P04211 117 aa5.52□□□□□ -1.53
UBR4-206ENST00000419533 IGFL1Q6UW32 110 aa5.51□□□□□ -1.53
UBR4-206ENST00000419533 ERC2-IT1O76042 136 aa5.5□□□□□ -1.53
UBR4-206ENST00000419533 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
UBR4-206ENST00000419533 KLKP1Q107X0 134 aa5.49□□□□□ -1.53
UBR4-206ENST00000419533 PSORS1C2Q9UIG4 136 aa5.48□□□□□ -1.53
UBR4-206ENST00000419533 K7EQZ3 153 aa5.47□□□□□ -1.53
UBR4-206ENST00000419533 DSCR10P59022 87 aa5.47□□□□□ -1.53
UBR4-206ENST00000419533 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
UBR4-206ENST00000419533 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
UBR4-206ENST00000419533 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
UBR4-206ENST00000419533 Q8N377 158 aa5.46□□□□□ -1.54
UBR4-206ENST00000419533 OBSCN-AS1Q96MR7 158 aa5.46□□□□□ -1.54
UBR4-206ENST00000419533 MGAM2Q2M2H8 2515 aa5.46□□□□□ -1.54
UBR4-206ENST00000419533 REV3LO60673 3130 aa5.45□□□□□ -1.54
UBR4-206ENST00000419533 UBR5O95071 2799 aaPredicted RBP5.45□□□□□ -1.54
UBR4-206ENST00000419533 C9orf92A6NGG3 77 aa5.45□□□□□ -1.54
UBR4-206ENST00000419533 LINC01600Q96MT4 127 aa5.45□□□□□ -1.54
UBR4-206ENST00000419533 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
UBR4-206ENST00000419533 PRR15Q8IV56 129 aa5.45□□□□□ -1.54
UBR4-206ENST00000419533 H7BZZ5 65 aa5.44□□□□□ -1.54
UBR4-206ENST00000419533 LCE6AA0A183 80 aa5.43□□□□□ -1.54
UBR4-206ENST00000419533 FLNCQ14315 2725 aa5.43□□□□□ -1.54
UBR4-206ENST00000419533 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
UBR4-206ENST00000419533 TNP2Q05952 138 aa5.42□□□□□ -1.54
UBR4-206ENST00000419533 ANAPC11Q9NYG5 84 aa5.42□□□□□ -1.54
UBR4-206ENST00000419533 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
UBR4-206ENST00000419533 COL6A5A8TX70 2615 aa5.42□□□□□ -1.54
UBR4-206ENST00000419533 SETXQ7Z333 2677 aaKnown RBP5.41□□□□□ -1.54
UBR4-206ENST00000419533 DMXL1Q9Y485 3027 aa5.41□□□□□ -1.54
UBR4-206ENST00000419533 EYSQ5T1H1 3165 aa5.41□□□□□ -1.54
UBR4-206ENST00000419533 DMXL2Q8TDJ6 3036 aa5.4□□□□□ -1.54
UBR4-206ENST00000419533 FRYQ5TBA9 3013 aa5.4□□□□□ -1.55
UBR4-206ENST00000419533 A8MUN3 132 aa5.4□□□□□ -1.55
UBR4-206ENST00000419533 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms