RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
HDAC9-208ENST00000417496 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-208ENST00000417496 Q8N9L7 120 aa9.46□□□□□ -0.9
HDAC9-208ENST00000417496 RPL37AP8A6NKH3 93 aa9.45□□□□□ -0.9
HDAC9-208ENST00000417496 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
HDAC9-208ENST00000417496 OXTP01178 125 aa9.45□□□□□ -0.9
HDAC9-208ENST00000417496 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
HDAC9-208ENST00000417496 H3BQ85 93 aa9.44□□□□□ -0.9
HDAC9-208ENST00000417496 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
HDAC9-208ENST00000417496 NKAPP1Q8N9T2 125 aa9.44□□□□□ -0.9
HDAC9-208ENST00000417496 CMYA5Q8N3K9 4069 aa9.44□□□□□ -0.9
HDAC9-208ENST00000417496 CXCL6P80162 114 aa9.43□□□□□ -0.9
HDAC9-208ENST00000417496 KRTAP24-1Q3LI83 254 aa9.43□□□□□ -0.9
HDAC9-208ENST00000417496 C3orf84H3BNL1 204 aa9.42□□□□□ -0.9
HDAC9-208ENST00000417496 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
HDAC9-208ENST00000417496 KCNQ1DNQ9H478 68 aa9.41□□□□□ -0.9
HDAC9-208ENST00000417496 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
HDAC9-208ENST00000417496 Q8N377 158 aa9.4□□□□□ -0.9
HDAC9-208ENST00000417496 TM2D3Q9BRN9 247 aa9.4□□□□□ -0.9
HDAC9-208ENST00000417496 TRAV7A0A075B6U4 112 aa9.4□□□□□ -0.91
HDAC9-208ENST00000417496 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
HDAC9-208ENST00000417496 LINC00588Q9Y4M8 146 aa9.39□□□□□ -0.91
HDAC9-208ENST00000417496 RMI2Q96E14 147 aa9.38□□□□□ -0.91
HDAC9-208ENST00000417496 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
HDAC9-208ENST00000417496 MRAPQ8TCY5 172 aa9.37□□□□□ -0.91
HDAC9-208ENST00000417496 Q9BRP9 147 aa9.37□□□□□ -0.91
HDAC9-208ENST00000417496 H7BZZ5 65 aa9.36□□□□□ -0.91
HDAC9-208ENST00000417496 BPY2O14599 106 aa9.36□□□□□ -0.91
HDAC9-208ENST00000417496 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
HDAC9-208ENST00000417496 LYSTQ99698 3801 aa9.36□□□□□ -0.91
HDAC9-208ENST00000417496 NREPQ16612 68 aa9.36□□□□□ -0.91
HDAC9-208ENST00000417496 CSMD3Q7Z407 3707 aa9.35□□□□□ -0.91
HDAC9-208ENST00000417496 Q6ZRX8 168 aa9.33□□□□□ -0.92
HDAC9-208ENST00000417496 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
HDAC9-208ENST00000417496 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
HDAC9-208ENST00000417496 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
HDAC9-208ENST00000417496 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-208ENST00000417496 BCE1O60756 84 aa9.32□□□□□ -0.92
HDAC9-208ENST00000417496 IGKV4-1P06312 121 aa9.32□□□□□ -0.92
HDAC9-208ENST00000417496 F8WDY8 70 aa9.31□□□□□ -0.92
HDAC9-208ENST00000417496 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
HDAC9-208ENST00000417496 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
HDAC9-208ENST00000417496 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
HDAC9-208ENST00000417496 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
HDAC9-208ENST00000417496 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
HDAC9-208ENST00000417496 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
HDAC9-208ENST00000417496 DNAH3Q8TD57 4116 aa9.3□□□□□ -0.92
HDAC9-208ENST00000417496 F8WEM9 126 aa9.3□□□□□ -0.92
HDAC9-208ENST00000417496 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
HDAC9-208ENST00000417496 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
HDAC9-208ENST00000417496 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
HDAC9-208ENST00000417496 C4orf26Q17RF5 130 aa9.29□□□□□ -0.92
HDAC9-208ENST00000417496 A0A0G2JQZ4 141 aa9.28□□□□□ -0.92
HDAC9-208ENST00000417496 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
HDAC9-208ENST00000417496 DHRS4-AS1Q9P1J3 65 aa9.28□□□□□ -0.92
HDAC9-208ENST00000417496 DNAH10Q8IVF4 4471 aa9.28□□□□□ -0.92
HDAC9-208ENST00000417496 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
HDAC9-208ENST00000417496 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
HDAC9-208ENST00000417496 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
HDAC9-208ENST00000417496 SPRR1AP35321 89 aa9.27□□□□□ -0.93
HDAC9-208ENST00000417496 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
HDAC9-208ENST00000417496 UBE2BP63146 152 aa9.26□□□□□ -0.93
HDAC9-208ENST00000417496 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
HDAC9-208ENST00000417496 HUWE1Q7Z6Z7 4374 aaKnown RBP9.26□□□□□ -0.93
HDAC9-208ENST00000417496 PRYO14603 147 aa9.25□□□□□ -0.93
HDAC9-208ENST00000417496 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
HDAC9-208ENST00000417496 Q5XG85 94 aa9.25□□□□□ -0.93
HDAC9-208ENST00000417496 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
HDAC9-208ENST00000417496 TNP2Q05952 138 aa9.24□□□□□ -0.93
HDAC9-208ENST00000417496 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
HDAC9-208ENST00000417496 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
HDAC9-208ENST00000417496 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
HDAC9-208ENST00000417496 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
HDAC9-208ENST00000417496 KRTAP1-5Q9BYS1 174 aa9.22□□□□□ -0.93
HDAC9-208ENST00000417496 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
HDAC9-208ENST00000417496 K7EIL1 84 aa9.21□□□□□ -0.94
HDAC9-208ENST00000417496 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
HDAC9-208ENST00000417496 Q8NBF4 154 aa9.2□□□□□ -0.94
HDAC9-208ENST00000417496 PRLHP81277 87 aa9.2□□□□□ -0.94
HDAC9-208ENST00000417496 SMIM29Q86T20 159 aa9.2□□□□□ -0.94
HDAC9-208ENST00000417496 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
HDAC9-208ENST00000417496 A0A096LNI7 61 aa9.19□□□□□ -0.94
HDAC9-208ENST00000417496 SERP1Q9Y6X1 66 aa9.19□□□□□ -0.94
HDAC9-208ENST00000417496 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
HDAC9-208ENST00000417496 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
HDAC9-208ENST00000417496 HIGD2AQ9BW72 106 aa9.17□□□□□ -0.94
HDAC9-208ENST00000417496 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-208ENST00000417496 DNAH9Q9NYC9 4486 aa9.16□□□□□ -0.94
HDAC9-208ENST00000417496 DSCR10P59022 87 aa9.16□□□□□ -0.94
HDAC9-208ENST00000417496 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
HDAC9-208ENST00000417496 K7EQZ3 153 aa9.15□□□□□ -0.94
HDAC9-208ENST00000417496 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.94
HDAC9-208ENST00000417496 SPRR4Q96PI1 79 aa9.15□□□□□ -0.94
HDAC9-208ENST00000417496 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
HDAC9-208ENST00000417496 NDUFC1O43677 76 aa9.13□□□□□ -0.95
HDAC9-208ENST00000417496 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
HDAC9-208ENST00000417496 PSCAO43653 123 aa9.12□□□□□ -0.95
HDAC9-208ENST00000417496 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
HDAC9-208ENST00000417496 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
HDAC9-208ENST00000417496 DNAH7Q8WXX0 4024 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms