RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 EGFEM1PQ0D2K5 195 aa13.86□□□□□ -0.19
AP1S3-205ENST00000415298 NKAPP1Q8N9T2 125 aa13.86□□□□□ -0.19
AP1S3-205ENST00000415298 KRTAP21-3Q3LHN1 58 aa13.86□□□□□ -0.19
AP1S3-205ENST00000415298 NBEAL2Q6ZNJ1 2754 aa13.84□□□□□ -0.19
AP1S3-205ENST00000415298 LIMD2Q9BT23 127 aa13.84□□□□□ -0.19
AP1S3-205ENST00000415298 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
AP1S3-205ENST00000415298 CMC4P56277 68 aaPredicted RBP13.83□□□□□ -0.2
AP1S3-205ENST00000415298 IGHV3-73A0A0B4J1V6 119 aa13.82□□□□□ -0.2
AP1S3-205ENST00000415298 A8MTW9 85 aa13.82□□□□□ -0.2
AP1S3-205ENST00000415298 LCE6AA0A183 80 aa13.81□□□□□ -0.2
AP1S3-205ENST00000415298 DNAH3Q8TD57 4116 aa13.81□□□□□ -0.2
AP1S3-205ENST00000415298 PRM2P04554 102 aa13.8□□□□□ -0.2
AP1S3-205ENST00000415298 IGKV4-1P06312 121 aa13.8□□□□□ -0.2
AP1S3-205ENST00000415298 GIG44P09565 113 aaPredicted RBP13.8□□□□□ -0.2
AP1S3-205ENST00000415298 K7EQD1 137 aa13.79□□□□□ -0.2
AP1S3-205ENST00000415298 IGHV4-30-4P0DP06 118 aa13.79□□□□□ -0.2
AP1S3-205ENST00000415298 NANOS2P60321 138 aaKnown RBP13.77□□□□□ -0.21
AP1S3-205ENST00000415298 MUC7Q8TAX7 377 aa13.77□□□□□ -0.21
AP1S3-205ENST00000415298 ZCCHC13Q8WW36 166 aaKnown RBP13.77□□□□□ -0.21
AP1S3-205ENST00000415298 HTN1P15515 57 aa13.75□□□□□ -0.21
AP1S3-205ENST00000415298 Q8N9P0 234 aaPredicted RBP13.75□□□□□ -0.21
AP1S3-205ENST00000415298 Q75L30 129 aa13.74□□□□□ -0.21
AP1S3-205ENST00000415298 Q8N9L7 120 aa13.74□□□□□ -0.21
AP1S3-205ENST00000415298 PRR15LQ9BU68 103 aa13.74□□□□□ -0.21
AP1S3-205ENST00000415298 CDC42SE1Q9NRR8 79 aa13.73□□□□□ -0.21
AP1S3-205ENST00000415298 A6NED7 52 aa13.73□□□□□ -0.21
AP1S3-205ENST00000415298 LINC00575Q6W349 94 aa13.72□□□□□ -0.21
AP1S3-205ENST00000415298 TOMM7Q9P0U1 55 aa13.72□□□□□ -0.21
AP1S3-205ENST00000415298 CSNK1G2-AS1Q8NCQ2 148 aa13.71□□□□□ -0.21
AP1S3-205ENST00000415298 KPRPQ5T749 579 aaPredicted RBP13.7□□□□□ -0.22
AP1S3-205ENST00000415298 Q6ZSN1 163 aa13.7□□□□□ -0.22
AP1S3-205ENST00000415298 H3BQ85 93 aa13.69□□□□□ -0.22
AP1S3-205ENST00000415298 K7EIL1 84 aa13.69□□□□□ -0.22
AP1S3-205ENST00000415298 INSP01308 110 aa13.69□□□□□ -0.22
AP1S3-205ENST00000415298 FAM30AQ9NZY2 134 aa13.68□□□□□ -0.22
AP1S3-205ENST00000415298 LINC01554Q52M75 96 aa13.68□□□□□ -0.22
AP1S3-205ENST00000415298 CDC42SE2Q9NRR3 84 aa13.67□□□□□ -0.22
AP1S3-205ENST00000415298 DEFB135Q30KP9 77 aa13.67□□□□□ -0.22
AP1S3-205ENST00000415298 IGLV4-60A0A075B6I1 120 aa13.66□□□□□ -0.22
AP1S3-205ENST00000415298 PRR4Q16378 134 aa13.66□□□□□ -0.22
AP1S3-205ENST00000415298 MOBPQ13875 183 aa13.66□□□□□ -0.22
AP1S3-205ENST00000415298 C6orf99Q4VX62 202 aa13.64□□□□□ -0.23
AP1S3-205ENST00000415298 LINC00612Q8N6U2 182 aa13.64□□□□□ -0.23
AP1S3-205ENST00000415298 LOC100131303A0A0U1RQF7 123 aa13.63□□□□□ -0.23
AP1S3-205ENST00000415298 CELA1Q9UNI1 258 aa13.62□□□□□ -0.23
AP1S3-205ENST00000415298 LOC101927531A0A1B0GV80 90 aa13.62□□□□□ -0.23
AP1S3-205ENST00000415298 IGHV3-53P01767 116 aa13.62□□□□□ -0.23
AP1S3-205ENST00000415298 C9orf116Q5BN46 136 aaPredicted RBP13.62□□□□□ -0.23
AP1S3-205ENST00000415298 NDUFB1O75438 58 aa13.61□□□□□ -0.23
AP1S3-205ENST00000415298 LINC00313P59037 77 aa13.61□□□□□ -0.23
AP1S3-205ENST00000415298 ELOF1P60002 83 aaKnown RBP13.61□□□□□ -0.23
AP1S3-205ENST00000415298 SMIM29Q86T20 159 aa13.61□□□□□ -0.23
AP1S3-205ENST00000415298 TENM3Q9P273 2699 aa13.61□□□□□ -0.23
AP1S3-205ENST00000415298 SERTAD4-AS1Q5TG53 156 aa13.6□□□□□ -0.23
AP1S3-205ENST00000415298 X6R8D5 127 aa13.59□□□□□ -0.23
AP1S3-205ENST00000415298 B9D2Q9BPU9 175 aa13.59□□□□□ -0.23
AP1S3-205ENST00000415298 MEGF8Q7Z7M0 2845 aa13.58□□□□□ -0.24
AP1S3-205ENST00000415298 DEFB4AO15263 64 aa13.58□□□□□ -0.24
AP1S3-205ENST00000415298 PRR3P79522 188 aaKnown RBP13.57□□□□□ -0.24
AP1S3-205ENST00000415298 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
AP1S3-205ENST00000415298 COX7BP24311 80 aa13.56□□□□□ -0.24
AP1S3-205ENST00000415298 TRGV2A0A075B6R0 118 aa13.55□□□□□ -0.24
AP1S3-205ENST00000415298 Q6ZQY7 126 aa13.55□□□□□ -0.24
AP1S3-205ENST00000415298 LINC00208Q96KT6 92 aa13.53□□□□□ -0.24
AP1S3-205ENST00000415298 COL7A1Q02388 2944 aa13.53□□□□□ -0.24
AP1S3-205ENST00000415298 C10orf25Q5T742 122 aa13.53□□□□□ -0.24
AP1S3-205ENST00000415298 ETDCA0A1B0GVM5 59 aa13.52□□□□□ -0.24
AP1S3-205ENST00000415298 NOP10Q9NPE3 64 aaKnown RBP13.52□□□□□ -0.24
AP1S3-205ENST00000415298 Q9BRP9 147 aa13.52□□□□□ -0.25
AP1S3-205ENST00000415298 HUWE1Q7Z6Z7 4374 aaKnown RBP13.51□□□□□ -0.25
AP1S3-205ENST00000415298 PRKDCP78527 4128 aaKnown RBP13.51□□□□□ -0.25
AP1S3-205ENST00000415298 IGHV4-28A0A0C4DH34 117 aa13.5□□□□□ -0.25
AP1S3-205ENST00000415298 C16orf74Q96GX8 76 aa13.5□□□□□ -0.25
AP1S3-205ENST00000415298 Q8NAQ8 132 aa13.49□□□□□ -0.25
AP1S3-205ENST00000415298 DNAH9Q9NYC9 4486 aa13.49□□□□□ -0.25
AP1S3-205ENST00000415298 PRAC1Q96KF2 57 aa13.48□□□□□ -0.25
AP1S3-205ENST00000415298 IGHV3OR16-9A0A0B4J2B5 98 aa13.47□□□□□ -0.25
AP1S3-205ENST00000415298 MP68P56378 58 aa13.47□□□□□ -0.25
AP1S3-205ENST00000415298 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
AP1S3-205ENST00000415298 KIAA0087Q14695 138 aa13.45□□□□□ -0.26
AP1S3-205ENST00000415298 C3orf84H3BNL1 204 aa13.44□□□□□ -0.26
AP1S3-205ENST00000415298 DEFB130BP0DP73 79 aa13.43□□□□□ -0.26
AP1S3-205ENST00000415298 DEFB130AP0DP74 79 aa13.43□□□□□ -0.26
AP1S3-205ENST00000415298 ST20-AS1Q8NBB2 130 aa13.43□□□□□ -0.26
AP1S3-205ENST00000415298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.42□□□□□ -0.26
AP1S3-205ENST00000415298 SPANXA2-OT1Q8N9U9 137 aa13.42□□□□□ -0.26
AP1S3-205ENST00000415298 A0A0J9YWU9 116 aa13.4□□□□□ -0.26
AP1S3-205ENST00000415298 HIGD2BQ4VC39 106 aa13.4□□□□□ -0.26
AP1S3-205ENST00000415298 KLK12Q9UKR0 248 aa13.39□□□□□ -0.27
AP1S3-205ENST00000415298 CASC2Q6XLA1 102 aa13.38□□□□□ -0.27
AP1S3-205ENST00000415298 IGKV3OR2-268A0A0C4DH90 116 aa13.37□□□□□ -0.27
AP1S3-205ENST00000415298 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
AP1S3-205ENST00000415298 FBN3Q75N90 2809 aa13.37□□□□□ -0.27
AP1S3-205ENST00000415298 PLA2G1BP04054 148 aaKnown RBP13.36□□□□□ -0.27
AP1S3-205ENST00000415298 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
AP1S3-205ENST00000415298 COX17Q14061 63 aa13.34□□□□□ -0.27
AP1S3-205ENST00000415298 Q8IZM0 81 aa13.33□□□□□ -0.28
AP1S3-205ENST00000415298 KCNQ1DNQ9H478 68 aa13.3□□□□□ -0.28
AP1S3-205ENST00000415298 Q8NDZ9 215 aa13.3□□□□□ -0.28
AP1S3-205ENST00000415298 HTN3P15516 51 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms