RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 A0A0G2JQZ4 141 aa9.58□□□□□ -0.88
SEMA3F-202ENST00000413852 A0A1W2PNN7 141 aa9.58□□□□□ -0.88
SEMA3F-202ENST00000413852 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
SEMA3F-202ENST00000413852 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
SEMA3F-202ENST00000413852 MIFP14174 115 aa9.57□□□□□ -0.88
SEMA3F-202ENST00000413852 KPRPQ5T749 579 aaPredicted RBP9.57□□□□□ -0.88
SEMA3F-202ENST00000413852 Q6ZTC4 211 aa9.57□□□□□ -0.88
SEMA3F-202ENST00000413852 IGKV2D-24A0A075B6R9 120 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 IGKV4-1P06312 121 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 KRTAP26-1Q6PEX3 210 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 NOTCH1P46531 2555 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 MPLKIPQ8TAP9 179 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 TRBV7-6A0A0J9YX20 115 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 M0R378 163 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 TMEM254Q8TBM7 123 aa9.56□□□□□ -0.88
SEMA3F-202ENST00000413852 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
SEMA3F-202ENST00000413852 SRRM2Q9UQ35 2752 aaKnown RBP9.55□□□□□ -0.88
SEMA3F-202ENST00000413852 FAM30AQ9NZY2 134 aa9.54□□□□□ -0.88
SEMA3F-202ENST00000413852 PDE6GP18545 87 aa9.54□□□□□ -0.88
SEMA3F-202ENST00000413852 ESRGQ1W209 222 aa9.54□□□□□ -0.88
SEMA3F-202ENST00000413852 ST20-AS1Q8NBB2 130 aa9.54□□□□□ -0.88
SEMA3F-202ENST00000413852 LRCOL1A6NCL2 159 aa9.54□□□□□ -0.88
SEMA3F-202ENST00000413852 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
SEMA3F-202ENST00000413852 Q8N377 158 aa9.53□□□□□ -0.88
SEMA3F-202ENST00000413852 EPM2AB3EWF7 344 aa9.52□□□□□ -0.88
SEMA3F-202ENST00000413852 STAB1Q9NY15 2570 aa9.52□□□□□ -0.89
SEMA3F-202ENST00000413852 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
SEMA3F-202ENST00000413852 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
SEMA3F-202ENST00000413852 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
SEMA3F-202ENST00000413852 PRB2P02812 416 aaPredicted RBP9.5□□□□□ -0.89
SEMA3F-202ENST00000413852 SMIM29Q86T20 159 aa9.49□□□□□ -0.89
SEMA3F-202ENST00000413852 C1orf43Q9BWL3 253 aa9.48□□□□□ -0.89
SEMA3F-202ENST00000413852 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
SEMA3F-202ENST00000413852 DEFB116Q30KQ4 102 aa9.48□□□□□ -0.89
SEMA3F-202ENST00000413852 OCR1Q9BZK8 76 aa9.48□□□□□ -0.89
SEMA3F-202ENST00000413852 PKIGQ9Y2B9 76 aa9.48□□□□□ -0.89
SEMA3F-202ENST00000413852 BCE1O60756 84 aa9.47□□□□□ -0.89
SEMA3F-202ENST00000413852 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
SEMA3F-202ENST00000413852 A0A1W2PNM2 257 aa9.46□□□□□ -0.89
SEMA3F-202ENST00000413852 ERC2-IT1O76042 136 aa9.46□□□□□ -0.89
SEMA3F-202ENST00000413852 SYCNQ0VAF6 134 aa9.46□□□□□ -0.89
SEMA3F-202ENST00000413852 Q9BRP9 147 aa9.46□□□□□ -0.89
SEMA3F-202ENST00000413852 LYSTQ99698 3801 aa9.46□□□□□ -0.89
SEMA3F-202ENST00000413852 WIPF1O43516 503 aa9.46□□□□□ -0.89
SEMA3F-202ENST00000413852 PRR4Q16378 134 aa9.46□□□□□ -0.9
SEMA3F-202ENST00000413852 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
SEMA3F-202ENST00000413852 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
SEMA3F-202ENST00000413852 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
SEMA3F-202ENST00000413852 PRYO14603 147 aa9.44□□□□□ -0.9
SEMA3F-202ENST00000413852 KMT2BQ9UMN6 2715 aaPredicted RBP9.44□□□□□ -0.9
SEMA3F-202ENST00000413852 KRTAP10-11P60412 298 aa9.43□□□□□ -0.9
SEMA3F-202ENST00000413852 BRK1Q8WUW1 75 aa9.43□□□□□ -0.9
SEMA3F-202ENST00000413852 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
SEMA3F-202ENST00000413852 H3BQ85 93 aa9.41□□□□□ -0.9
SEMA3F-202ENST00000413852 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
SEMA3F-202ENST00000413852 C1orf137Q5JT78 98 aa9.4□□□□□ -0.9
SEMA3F-202ENST00000413852 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.9
SEMA3F-202ENST00000413852 MRAPQ8TCY5 172 aa9.39□□□□□ -0.91
SEMA3F-202ENST00000413852 K7EQZ3 153 aa9.39□□□□□ -0.91
SEMA3F-202ENST00000413852 COL7A1Q02388 2944 aa9.38□□□□□ -0.91
SEMA3F-202ENST00000413852 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
SEMA3F-202ENST00000413852 NBEAL1Q6ZS30 2694 aa9.38□□□□□ -0.91
SEMA3F-202ENST00000413852 NDUFC1O43677 76 aa9.37□□□□□ -0.91
SEMA3F-202ENST00000413852 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
SEMA3F-202ENST00000413852 PRO0628Q9UI54 55 aa9.37□□□□□ -0.91
SEMA3F-202ENST00000413852 Q6ZRX8 168 aa9.37□□□□□ -0.91
SEMA3F-202ENST00000413852 UBE2BP63146 152 aa9.36□□□□□ -0.91
SEMA3F-202ENST00000413852 IGLV5-48A0A075B6I7 105 aa9.36□□□□□ -0.91
SEMA3F-202ENST00000413852 DSCR10P59022 87 aa9.35□□□□□ -0.91
SEMA3F-202ENST00000413852 CMYA5Q8N3K9 4069 aa9.35□□□□□ -0.91
SEMA3F-202ENST00000413852 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
SEMA3F-202ENST00000413852 J3QKU1 62 aa9.33□□□□□ -0.92
SEMA3F-202ENST00000413852 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
SEMA3F-202ENST00000413852 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
SEMA3F-202ENST00000413852 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
SEMA3F-202ENST00000413852 LINC01556Q5JQF7 62 aa9.32□□□□□ -0.92
SEMA3F-202ENST00000413852 WFDC13Q8IUB5 93 aa9.31□□□□□ -0.92
SEMA3F-202ENST00000413852 DNAH1Q9P2D7 4330 aa9.31□□□□□ -0.92
SEMA3F-202ENST00000413852 PRLHP81277 87 aa9.31□□□□□ -0.92
SEMA3F-202ENST00000413852 Q8NBF4 154 aa9.31□□□□□ -0.92
SEMA3F-202ENST00000413852 C11orf45Q8TAV5 145 aa9.31□□□□□ -0.92
SEMA3F-202ENST00000413852 TNP2Q05952 138 aa9.3□□□□□ -0.92
SEMA3F-202ENST00000413852 IGKV2-24A0A0C4DH68 120 aa9.29□□□□□ -0.92
SEMA3F-202ENST00000413852 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
SEMA3F-202ENST00000413852 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
SEMA3F-202ENST00000413852 C1orf64Q8NEQ6 169 aa9.28□□□□□ -0.92
SEMA3F-202ENST00000413852 LINC00476Q8WZB0 136 aa9.28□□□□□ -0.92
SEMA3F-202ENST00000413852 DHRS4-AS1Q9P1J3 65 aa9.28□□□□□ -0.92
SEMA3F-202ENST00000413852 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
SEMA3F-202ENST00000413852 PSPHP1O15172 72 aa9.27□□□□□ -0.93
SEMA3F-202ENST00000413852 ATP5EP56381 51 aaPredicted RBP9.26□□□□□ -0.93
SEMA3F-202ENST00000413852 PSCAO43653 123 aa9.25□□□□□ -0.93
SEMA3F-202ENST00000413852 A0A096LNI7 61 aa9.25□□□□□ -0.93
SEMA3F-202ENST00000413852 H3BNG1 76 aa9.25□□□□□ -0.93
SEMA3F-202ENST00000413852 DNAH9Q9NYC9 4486 aa9.24□□□□□ -0.93
SEMA3F-202ENST00000413852 A0A087WSZ3 146 aa9.24□□□□□ -0.93
SEMA3F-202ENST00000413852 SPRR1AP35321 89 aa9.24□□□□□ -0.93
SEMA3F-202ENST00000413852 IGFL1Q6UW32 110 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms