RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CELSR2Q9HCU4 2923 aa5.97□□□□□ -1.45
SYNE1-211ENST00000413186 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.45
SYNE1-211ENST00000413186 FAM19A1Q7Z5A9 133 aa5.96□□□□□ -1.46
SYNE1-211ENST00000413186 GIG44P09565 113 aaPredicted RBP5.96□□□□□ -1.46
SYNE1-211ENST00000413186 COX17Q14061 63 aa5.95□□□□□ -1.46
SYNE1-211ENST00000413186 C4orf26Q17RF5 130 aa5.95□□□□□ -1.46
SYNE1-211ENST00000413186 LINC01561Q8N1V8 128 aa5.95□□□□□ -1.46
SYNE1-211ENST00000413186 M0R2N4 97 aa5.95□□□□□ -1.46
SYNE1-211ENST00000413186 LINC00242Q5T6M2 205 aa5.95□□□□□ -1.46
SYNE1-211ENST00000413186 TM2D3Q9BRN9 247 aa5.94□□□□□ -1.46
SYNE1-211ENST00000413186 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
SYNE1-211ENST00000413186 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
SYNE1-211ENST00000413186 IGLV4-60A0A075B6I1 120 aa5.94□□□□□ -1.46
SYNE1-211ENST00000413186 TRAV7A0A075B6U4 112 aa5.94□□□□□ -1.46
SYNE1-211ENST00000413186 hDV103S1A0JD37 113 aa5.94□□□□□ -1.46
SYNE1-211ENST00000413186 Q8IZM0 81 aa5.94□□□□□ -1.46
SYNE1-211ENST00000413186 LINC01556Q5JQF7 62 aa5.93□□□□□ -1.46
SYNE1-211ENST00000413186 HIVEP1P15822 2718 aa5.93□□□□□ -1.46
SYNE1-211ENST00000413186 C8orf17Q9NRJ1 99 aa5.93□□□□□ -1.46
SYNE1-211ENST00000413186 Q9UF83 564 aa5.93□□□□□ -1.46
SYNE1-211ENST00000413186 HCG22E2RYF7 251 aa5.93□□□□□ -1.46
SYNE1-211ENST00000413186 F8WDY8 70 aa5.92□□□□□ -1.46
SYNE1-211ENST00000413186 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
SYNE1-211ENST00000413186 TRBV10-3A0A0K0K1G6 114 aa5.92□□□□□ -1.46
SYNE1-211ENST00000413186 SMIM1B2RUZ4 78 aa5.91□□□□□ -1.46
SYNE1-211ENST00000413186 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-211ENST00000413186 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-211ENST00000413186 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
SYNE1-211ENST00000413186 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
SYNE1-211ENST00000413186 FAM229AH3BQW9 127 aa5.9□□□□□ -1.46
SYNE1-211ENST00000413186 C1orf134Q5TEV5 83 aa5.9□□□□□ -1.47
SYNE1-211ENST00000413186 NSD1Q96L73 2696 aaPredicted RBP5.9□□□□□ -1.47
SYNE1-211ENST00000413186 Q6JHZ5 121 aa5.89□□□□□ -1.47
SYNE1-211ENST00000413186 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
SYNE1-211ENST00000413186 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
SYNE1-211ENST00000413186 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
SYNE1-211ENST00000413186 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
SYNE1-211ENST00000413186 C2orf48Q96LS8 159 aa5.88□□□□□ -1.47
SYNE1-211ENST00000413186 IGLV5-45A0A087WSX0 123 aa5.88□□□□□ -1.47
SYNE1-211ENST00000413186 LRBAP50851 2863 aa5.87□□□□□ -1.47
SYNE1-211ENST00000413186 IGLV5-39A0A0G2JS06 123 aa5.87□□□□□ -1.47
SYNE1-211ENST00000413186 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
SYNE1-211ENST00000413186 LCA10Q71F78 164 aa5.87□□□□□ -1.47
SYNE1-211ENST00000413186 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
SYNE1-211ENST00000413186 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
SYNE1-211ENST00000413186 H0Y9P7 68 aa5.86□□□□□ -1.47
SYNE1-211ENST00000413186 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
SYNE1-211ENST00000413186 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
SYNE1-211ENST00000413186 RPL28P46779 137 aaKnown RBP5.86□□□□□ -1.47
SYNE1-211ENST00000413186 COX6A2Q02221 97 aa5.86□□□□□ -1.47
SYNE1-211ENST00000413186 LINC00588Q9Y4M8 146 aa5.85□□□□□ -1.47
SYNE1-211ENST00000413186 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
SYNE1-211ENST00000413186 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
SYNE1-211ENST00000413186 UNQ6190/PRO20217Q6UXQ8 127 aa5.85□□□□□ -1.47
SYNE1-211ENST00000413186 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
SYNE1-211ENST00000413186 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.47
SYNE1-211ENST00000413186 M0R378 163 aa5.84□□□□□ -1.47
SYNE1-211ENST00000413186 DNAH10OSP0CZ25 163 aa5.84□□□□□ -1.47
SYNE1-211ENST00000413186 Q8N3U1 123 aa5.84□□□□□ -1.47
SYNE1-211ENST00000413186 NOTCH1P46531 2555 aa5.84□□□□□ -1.47
SYNE1-211ENST00000413186 HRNRQ86YZ3 2850 aaPredicted RBP5.84□□□□□ -1.47
SYNE1-211ENST00000413186 NBDYA0A0U1RRE5 68 aa5.83□□□□□ -1.48
SYNE1-211ENST00000413186 C6orf223Q8N319 242 aa5.83□□□□□ -1.48
SYNE1-211ENST00000413186 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
SYNE1-211ENST00000413186 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
SYNE1-211ENST00000413186 KRTAP21-3Q3LHN1 58 aa5.82□□□□□ -1.48
SYNE1-211ENST00000413186 SMIM11BQ8TCY0 68 aa5.82□□□□□ -1.48
SYNE1-211ENST00000413186 IGLV5-52A0A0A0MRZ9 124 aa5.82□□□□□ -1.48
SYNE1-211ENST00000413186 ADAMTSL4-AS1Q5T5F5 129 aa5.82□□□□□ -1.48
SYNE1-211ENST00000413186 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
SYNE1-211ENST00000413186 IGKV2-28A0A075B6P5 120 aa5.81□□□□□ -1.48
SYNE1-211ENST00000413186 IGKV2D-28P01615 120 aa5.81□□□□□ -1.48
SYNE1-211ENST00000413186 Q8N814 137 aa5.8□□□□□ -1.48
SYNE1-211ENST00000413186 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.8□□□□□ -1.48
SYNE1-211ENST00000413186 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
SYNE1-211ENST00000413186 ZANQ9Y493 2812 aa5.79□□□□□ -1.48
SYNE1-211ENST00000413186 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
SYNE1-211ENST00000413186 A0A087WYN8 130 aa5.79□□□□□ -1.48
SYNE1-211ENST00000413186 DHRS4-AS1Q9P1J3 65 aa5.79□□□□□ -1.48
SYNE1-211ENST00000413186 C9orf116Q5BN46 136 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-211ENST00000413186 Q6ZRU5 148 aa5.77□□□□□ -1.48
SYNE1-211ENST00000413186 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
SYNE1-211ENST00000413186 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
SYNE1-211ENST00000413186 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
SYNE1-211ENST00000413186 CIRBP-AS1Q8TBR5 109 aa5.76□□□□□ -1.49
SYNE1-211ENST00000413186 ANK2Q01484 3957 aa5.76□□□□□ -1.49
SYNE1-211ENST00000413186 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
SYNE1-211ENST00000413186 A8MUN3 132 aa5.75□□□□□ -1.49
SYNE1-211ENST00000413186 UQCR11O14957 56 aa5.75□□□□□ -1.49
SYNE1-211ENST00000413186 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
SYNE1-211ENST00000413186 GVQW2A0A096LPI5 108 aaPredicted RBP5.74□□□□□ -1.49
SYNE1-211ENST00000413186 TRAV22A0A0B4J277 110 aa5.74□□□□□ -1.49
SYNE1-211ENST00000413186 C6orf48Q9UBA6 75 aa5.74□□□□□ -1.49
SYNE1-211ENST00000413186 TENM4Q6N022 2769 aa5.73□□□□□ -1.49
SYNE1-211ENST00000413186 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
SYNE1-211ENST00000413186 LINC00575Q6W349 94 aa5.73□□□□□ -1.49
SYNE1-211ENST00000413186 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
SYNE1-211ENST00000413186 PRO0461Q9UI25 63 aa5.72□□□□□ -1.49
SYNE1-211ENST00000413186 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.49
SYNE1-211ENST00000413186 C10orf25Q5T742 122 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms