RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 LINC00528Q8N1L1 170 aa15.63■□□□□ 0.09
PMS1-205ENST00000409985 TRAV10A0A0B4J240 114 aa15.62■□□□□ 0.09
PMS1-205ENST00000409985 Q6ZRP5 223 aa15.61■□□□□ 0.09
PMS1-205ENST00000409985 PLA2G2DQ9UNK4 145 aa15.61■□□□□ 0.09
PMS1-205ENST00000409985 TRBV7-4A0A0J9YYF1 115 aa15.61■□□□□ 0.09
PMS1-205ENST00000409985 USP17L23D6RBM5 183 aa15.61■□□□□ 0.09
PMS1-205ENST00000409985 SERP2Q8N6R1 65 aa15.61■□□□□ 0.09
PMS1-205ENST00000409985 A0A087WVE0 104 aa15.57■□□□□ 0.08
PMS1-205ENST00000409985 KCNQ1DNQ9H478 68 aa15.57■□□□□ 0.08
PMS1-205ENST00000409985 BCE1O60756 84 aa15.57■□□□□ 0.08
PMS1-205ENST00000409985 RMI2Q96E14 147 aa15.53■□□□□ 0.08
PMS1-205ENST00000409985 CXCL6P80162 114 aa15.52■□□□□ 0.08
PMS1-205ENST00000409985 IGLV5-37A0A075B6J1 123 aa15.52■□□□□ 0.07
PMS1-205ENST00000409985 Q6ZVQ6 151 aa15.52■□□□□ 0.07
PMS1-205ENST00000409985 NKAPP1Q8N9T2 125 aa15.52■□□□□ 0.07
PMS1-205ENST00000409985 DNAH7Q8WXX0 4024 aa15.51■□□□□ 0.07
PMS1-205ENST00000409985 LINC00588Q9Y4M8 146 aa15.5■□□□□ 0.07
PMS1-205ENST00000409985 LINC01547P58512 204 aaPredicted RBP15.49■□□□□ 0.07
PMS1-205ENST00000409985 UPK3BQ9BT76 320 aa15.49■□□□□ 0.07
PMS1-205ENST00000409985 M0R2N4 97 aa15.48■□□□□ 0.07
PMS1-205ENST00000409985 FAM19A1Q7Z5A9 133 aa15.48■□□□□ 0.07
PMS1-205ENST00000409985 CSMD3Q7Z407 3707 aa15.47■□□□□ 0.07
PMS1-205ENST00000409985 C7orf33Q8WU49 177 aa15.46■□□□□ 0.07
PMS1-205ENST00000409985 PRYO14603 147 aa15.44■□□□□ 0.06
PMS1-205ENST00000409985 SERTAD4-AS1Q5TG53 156 aa15.44■□□□□ 0.06
PMS1-205ENST00000409985 DHRS4-AS1Q9P1J3 65 aa15.44■□□□□ 0.06
PMS1-205ENST00000409985 SMIM20Q8N5G0 67 aa15.42■□□□□ 0.06
PMS1-205ENST00000409985 HAMPP81172 84 aa15.41■□□□□ 0.06
PMS1-205ENST00000409985 STARD9Q9P2P6 4700 aa15.4■□□□□ 0.06
PMS1-205ENST00000409985 DYNC2H1Q8NCM8 4307 aaKnown RBP15.4■□□□□ 0.06
PMS1-205ENST00000409985 SPRR1AP35321 89 aa15.4■□□□□ 0.06
PMS1-205ENST00000409985 A0A1B0GW54 56 aa15.39■□□□□ 0.05
PMS1-205ENST00000409985 IGLV1-50A0A075B6I6 118 aa15.38■□□□□ 0.05
PMS1-205ENST00000409985 KRTAP4-16G5E9R7 235 aaPredicted RBP15.38■□□□□ 0.05
PMS1-205ENST00000409985 Q6ZRX8 168 aa15.37■□□□□ 0.05
PMS1-205ENST00000409985 TMEM258P61165 79 aa15.36■□□□□ 0.05
PMS1-205ENST00000409985 IGLV5-48A0A075B6I7 105 aa15.35■□□□□ 0.05
PMS1-205ENST00000409985 PLECQ15149 4684 aaKnown RBP15.35■□□□□ 0.05
PMS1-205ENST00000409985 LOC107984640A0A0U1RRK4 108 aa15.34■□□□□ 0.05
PMS1-205ENST00000409985 TRAV7A0A075B6U4 112 aa15.33■□□□□ 0.04
PMS1-205ENST00000409985 Q8N377 158 aa15.33■□□□□ 0.04
PMS1-205ENST00000409985 CASC10Q5T4H9 136 aa15.31■□□□□ 0.04
PMS1-205ENST00000409985 RPS28P62857 69 aaKnown RBP15.31■□□□□ 0.04
PMS1-205ENST00000409985 ETDCA0A1B0GVM5 59 aa15.29■□□□□ 0.04
PMS1-205ENST00000409985 MRPL55Q7Z7F7 128 aaKnown RBP15.27■□□□□ 0.04
PMS1-205ENST00000409985 KRTAP7-1Q8IUC3 87 aa15.27■□□□□ 0.03
PMS1-205ENST00000409985 TENM2Q9NT68 2774 aa15.27■□□□□ 0.03
PMS1-205ENST00000409985 LYSTQ99698 3801 aa15.26■□□□□ 0.03
PMS1-205ENST00000409985 Q9BRP9 147 aa15.26■□□□□ 0.03
PMS1-205ENST00000409985 CYSTM1Q9H1C7 97 aa15.26■□□□□ 0.03
PMS1-205ENST00000409985 FAM168BA1KXE4 195 aa15.25■□□□□ 0.03
PMS1-205ENST00000409985 RPL37AP8A6NKH3 93 aa15.23■□□□□ 0.03
PMS1-205ENST00000409985 NREPQ16612 68 aa15.23■□□□□ 0.03
PMS1-205ENST00000409985 J3KT08 172 aa15.23■□□□□ 0.03
PMS1-205ENST00000409985 TNP2Q05952 138 aa15.23■□□□□ 0.03
PMS1-205ENST00000409985 DEFB105AQ8NG35 78 aa15.21■□□□□ 0.03
PMS1-205ENST00000409985 CNBPP62633 177 aaKnown RBP15.2■□□□□ 0.02
PMS1-205ENST00000409985 FUSP35637 526 aaKnown RBP eCLIP15.19■□□□□ 0.02
PMS1-205ENST00000409985 WWC2-AS2Q96NR7 200 aa15.19■□□□□ 0.02
PMS1-205ENST00000409985 DNAH1Q9P2D7 4330 aa15.18■□□□□ 0.02
PMS1-205ENST00000409985 REG3GQ6UW15 175 aa15.16■□□□□ 0.02
PMS1-205ENST00000409985 FAM19A5Q7Z5A7 132 aaPredicted RBP15.16■□□□□ 0.02
PMS1-205ENST00000409985 KLKP1Q107X0 134 aa15.16■□□□□ 0.02
PMS1-205ENST00000409985 C16orf90A8MZG2 172 aa15.15■□□□□ 0.02
PMS1-205ENST00000409985 C20orf197Q8N268 126 aa15.15■□□□□ 0.02
PMS1-205ENST00000409985 SCXQ7RTU7 201 aa15.14■□□□□ 0.01
PMS1-205ENST00000409985 DPH3Q96FX2 82 aa15.14■□□□□ 0.01
PMS1-205ENST00000409985 BPY2O14599 106 aa15.13■□□□□ 0.01
PMS1-205ENST00000409985 SPRR4Q96PI1 79 aa15.13■□□□□ 0.01
PMS1-205ENST00000409985 IGKV4-1P06312 121 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 C14orf177Q52M58 125 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 C1orf137Q5JT78 98 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 SVIPQ8NHG7 77 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 VPS13DQ5THJ4 4388 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 ERC2-IT1O76042 136 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 Q8NBF4 154 aa15.12■□□□□ 0.01
PMS1-205ENST00000409985 A0A1W2PNM2 257 aa15.11■□□□□ 0.01
PMS1-205ENST00000409985 UBE2BP63146 152 aa15.1■□□□□ 0.01
PMS1-205ENST00000409985 ST20-AS1Q8NBB2 130 aa15.09■□□□□ 0.01
PMS1-205ENST00000409985 APLNQ9ULZ1 77 aa15.09■□□□□ 0.01
PMS1-205ENST00000409985 NUPR2A6NF83 97 aa15.08■□□□□ 0.01
PMS1-205ENST00000409985 C3orf84H3BNL1 204 aa15.08■□□□□ 0
PMS1-205ENST00000409985 KRTAP1-5Q9BYS1 174 aa15.08■□□□□ 0
PMS1-205ENST00000409985 PKIGQ9Y2B9 76 aa15.06■□□□□ 0
PMS1-205ENST00000409985 A0A096LNI7 61 aa15.06■□□□□ 0
PMS1-205ENST00000409985 NDUFC1O43677 76 aa15.06■□□□□ 0
PMS1-205ENST00000409985 H7BZZ5 65 aa15.04■□□□□ -0
PMS1-205ENST00000409985 PSCAO43653 123 aa15.04■□□□□ -0
PMS1-205ENST00000409985 SMIM29Q86T20 159 aa15.03■□□□□ -0
PMS1-205ENST00000409985 UBE2DNLQ8IWF7 75 aa15.03■□□□□ -0
PMS1-205ENST00000409985 IGLV8-61A0A075B6I0 122 aa15□□□□□ -0.01
PMS1-205ENST00000409985 SACSQ9NZJ4 4579 aa15□□□□□ -0.01
PMS1-205ENST00000409985 F8WEM9 126 aa14.99□□□□□ -0.01
PMS1-205ENST00000409985 A0A1W2PNN7 141 aa14.99□□□□□ -0.01
PMS1-205ENST00000409985 FAM236DA0A1B0GTK5 79 aa14.98□□□□□ -0.01
PMS1-205ENST00000409985 H0Y9J4 135 aa14.98□□□□□ -0.01
PMS1-205ENST00000409985 FAM236CP0DP71 79 aa14.98□□□□□ -0.01
PMS1-205ENST00000409985 Q8N9L7 120 aa14.97□□□□□ -0.01
PMS1-205ENST00000409985 OCR1Q9BZK8 76 aa14.97□□□□□ -0.01
PMS1-205ENST00000409985 HYDINQ4G0P3 5121 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms