RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 C11orf68Q9H3H3 251 aaKnown RBP2.06□□□□□ -2.08
CUL3-204ENST00000409777 CFAP46Q8IYW2 2715 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 COL12A1Q99715 3063 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 MAP1AP78559 2803 aaPredicted RBP2.06□□□□□ -2.08
CUL3-204ENST00000409777 M0R378 163 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 BPY2O14599 106 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 KCNQ1DNQ9H478 68 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 ZFYVE26Q68DK2 2539 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 IGSF10Q6WRI0 2623 aa2.06□□□□□ -2.08
CUL3-204ENST00000409777 SORL1Q92673 2214 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 SPRR1AP35321 89 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 A0A096LPF7 62 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 IGLV9-49A0A0B4J1Y8 123 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 TLX1NBP0CAT3 122 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 C15orf56Q8N910 161 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 SPRR4Q96PI1 79 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 LAMTOR3Q9UHA4 124 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 AKAP6Q13023 2319 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 UTP20O75691 2785 aaKnown RBP2.05□□□□□ -2.08
CUL3-204ENST00000409777 SPTA1P02549 2419 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 IGF2RP11717 2491 aa2.05□□□□□ -2.08
CUL3-204ENST00000409777 CSMD2Q7Z408 3487 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 DEFB130BP0DP73 79 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 DEFB130AP0DP74 79 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 FAM229BQ4G0N7 80 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 CLPSL2Q6UWE3 100 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 SNURFQ9Y675 71 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 ZANQ9Y493 2812 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 ZNF469Q96JG9 3925 aaPredicted RBP2.04□□□□□ -2.08
CUL3-204ENST00000409777 RIF1Q5UIP0 2472 aaKnown RBP2.04□□□□□ -2.08
CUL3-204ENST00000409777 hDV103S1A0JD37 113 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 ANGP03950 147 aaKnown RBP2.04□□□□□ -2.08
CUL3-204ENST00000409777 HAMPP81172 84 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 Q1T7F1 81 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 CYP4F30PQ9H0H9 118 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 Q8N377 158 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 C11orf45Q8TAV5 145 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 LINC00474Q9P2X8 69 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 TEX15Q9BXT5 2789 aa2.04□□□□□ -2.08
CUL3-204ENST00000409777 CUBNO60494 3623 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 HECTD1Q9ULT8 2610 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 CDK2AP2O75956 126 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 ESRGQ1W209 222 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 DNHD1Q96M86 4753 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 PDZD2O15018 2839 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 ABCA12Q86UK0 2595 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 IGLV8-61A0A075B6I0 122 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 IGLV10-54A0A075B6I4 117 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 A0A1W2PNM2 257 aa2.03□□□□□ -2.08
CUL3-204ENST00000409777 IGLV5-52A0A0A0MRZ9 124 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 APOC4P55056 127 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 PRR15Q8IV56 129 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 WFDC11Q8NEX6 87 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 FLNCQ14315 2725 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 DSCR10P59022 87 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 KPRPQ5T749 579 aaPredicted RBP2.02□□□□□ -2.09
CUL3-204ENST00000409777 Q6ZRP5 223 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 Q6ZRU5 148 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 Q6ZRX8 168 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 KRTAP7-1Q8IUC3 87 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 Q8NBF4 154 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 V9GYY9 64 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 FUSP35637 526 aaKnown RBP eCLIP2.02□□□□□ -2.09
CUL3-204ENST00000409777 DAD1P61803 113 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 SCXQ7RTU7 201 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 Q9BRP9 147 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 DHRS4-AS1Q9P1J3 65 aa2.02□□□□□ -2.09
CUL3-204ENST00000409777 DNAH3Q8TD57 4116 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 SPART-AS1P0CW21 52 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 SMIM29Q86T20 159 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 XAGE1AQ9HD64 81 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 KLK12Q9UKR0 248 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 LINC00588Q9Y4M8 146 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 IGLV1-50A0A075B6I6 118 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 KRTAP29-1A8MX34 341 aaPredicted RBP2.01□□□□□ -2.09
CUL3-204ENST00000409777 LINC01556Q5JQF7 62 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 Q8N9L7 120 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 C7orf33Q8WU49 177 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 HIGD2AQ9BW72 106 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 CSPG4Q6UVK1 2322 aa2.01□□□□□ -2.09
CUL3-204ENST00000409777 HIGD2BQ4VC39 106 aa2□□□□□ -2.09
CUL3-204ENST00000409777 PRAC1Q96KF2 57 aa2□□□□□ -2.09
CUL3-204ENST00000409777 APCP25054 2843 aa2□□□□□ -2.09
CUL3-204ENST00000409777 DEFB135Q30KP9 77 aa2□□□□□ -2.09
CUL3-204ENST00000409777 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
CUL3-204ENST00000409777 CAMK2N2Q96S95 79 aa2□□□□□ -2.09
CUL3-204ENST00000409777 SETD2Q9BYW2 2564 aaPredicted RBP2□□□□□ -2.09
CUL3-204ENST00000409777 NIPBLQ6KC79 2804 aaeCLIP2□□□□□ -2.09
CUL3-204ENST00000409777 ITPR3Q14573 2671 aa2□□□□□ -2.09
CUL3-204ENST00000409777 FBN1P35555 2871 aaKnown RBP2□□□□□ -2.09
CUL3-204ENST00000409777 IGLV2-33A0A075B6J2 118 aaPredicted RBP2□□□□□ -2.09
CUL3-204ENST00000409777 ETDCA0A1B0GVM5 59 aa2□□□□□ -2.09
CUL3-204ENST00000409777 DNAH10OSP0CZ25 163 aa2□□□□□ -2.09
CUL3-204ENST00000409777 WFDC10BQ8IUB3 73 aa2□□□□□ -2.09
CUL3-204ENST00000409777 NOTCH3Q9UM47 2321 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 SPG11Q96JI7 2443 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 C1orf64Q8NEQ6 169 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 H3BPC8 53 aa1.99□□□□□ -2.09
CUL3-204ENST00000409777 SPRR1BP22528 89 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms