RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DEFB116Q30KQ4 102 aa11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 H0Y9P7 68 aa11.09□□□□□ -0.63
PCDHA13-202ENST00000409494 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
PCDHA13-202ENST00000409494 SSBP3-AS1Q7Z2R9 100 aa11.08□□□□□ -0.64
PCDHA13-202ENST00000409494 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
PCDHA13-202ENST00000409494 SVIPQ8NHG7 77 aa11.07□□□□□ -0.64
PCDHA13-202ENST00000409494 C1orf195Q5TG92 126 aa11.06□□□□□ -0.64
PCDHA13-202ENST00000409494 SPAG11AQ6PDA7 123 aa11.06□□□□□ -0.64
PCDHA13-202ENST00000409494 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
PCDHA13-202ENST00000409494 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
PCDHA13-202ENST00000409494 H3BPC8 53 aa11.06□□□□□ -0.64
PCDHA13-202ENST00000409494 UNC80Q8N2C7 3258 aa11.04□□□□□ -0.64
PCDHA13-202ENST00000409494 CR1P17927 2039 aa11.04□□□□□ -0.64
PCDHA13-202ENST00000409494 C8orf87E5RJ46 101 aa11.04□□□□□ -0.64
PCDHA13-202ENST00000409494 ZNF861PO60384 105 aa11.03□□□□□ -0.64
PCDHA13-202ENST00000409494 SERTAD4-AS1Q5TG53 156 aa11.03□□□□□ -0.64
PCDHA13-202ENST00000409494 MAST4O15021 2626 aa11.02□□□□□ -0.64
PCDHA13-202ENST00000409494 ST20-AS1Q8NBB2 130 aa11□□□□□ -0.65
PCDHA13-202ENST00000409494 PSPHP1O15172 72 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 LINC00313P59037 77 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 PRUNE2Q8WUY3 3088 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 MGAQ8IWI9 3026 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 PCOTHQ58A44 107 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
PCDHA13-202ENST00000409494 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.66
PCDHA13-202ENST00000409494 C9orf129Q5T035 196 aaKnown RBP10.96□□□□□ -0.66
PCDHA13-202ENST00000409494 LINC01600Q96MT4 127 aa10.95□□□□□ -0.66
PCDHA13-202ENST00000409494 CENPEQ02224 2701 aa10.94□□□□□ -0.66
PCDHA13-202ENST00000409494 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
PCDHA13-202ENST00000409494 PRO0628Q9UI54 55 aa10.92□□□□□ -0.66
PCDHA13-202ENST00000409494 TRIOO75962 3097 aa10.92□□□□□ -0.66
PCDHA13-202ENST00000409494 PMAIP1Q13794 54 aa10.91□□□□□ -0.66
PCDHA13-202ENST00000409494 A8MWP4 228 aa10.9□□□□□ -0.66
PCDHA13-202ENST00000409494 J3QL48 77 aa10.9□□□□□ -0.66
PCDHA13-202ENST00000409494 FAM104AQ969W3 186 aa10.89□□□□□ -0.67
PCDHA13-202ENST00000409494 WDFY4Q6ZS81 3184 aa10.89□□□□□ -0.67
PCDHA13-202ENST00000409494 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
PCDHA13-202ENST00000409494 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
PCDHA13-202ENST00000409494 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
PCDHA13-202ENST00000409494 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
PCDHA13-202ENST00000409494 TRAV22A0A0B4J277 110 aa10.86□□□□□ -0.67
PCDHA13-202ENST00000409494 RETNLBQ9BQ08 111 aa10.86□□□□□ -0.67
PCDHA13-202ENST00000409494 ERC2-IT1O76042 136 aa10.86□□□□□ -0.67
PCDHA13-202ENST00000409494 ATP11AUNQ6ZP68 121 aa10.84□□□□□ -0.67
PCDHA13-202ENST00000409494 ACYP2P14621 99 aa10.84□□□□□ -0.67
PCDHA13-202ENST00000409494 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
PCDHA13-202ENST00000409494 VPS13AQ96RL7 3174 aa10.83□□□□□ -0.68
PCDHA13-202ENST00000409494 Q8N377 158 aa10.83□□□□□ -0.68
PCDHA13-202ENST00000409494 IGFL1Q6UW32 110 aa10.83□□□□□ -0.68
PCDHA13-202ENST00000409494 UNC79Q9P2D8 2635 aa10.82□□□□□ -0.68
PCDHA13-202ENST00000409494 KLKP1Q107X0 134 aa10.82□□□□□ -0.68
PCDHA13-202ENST00000409494 CDH23Q9H251 3354 aa10.82□□□□□ -0.68
PCDHA13-202ENST00000409494 PSORS1C2Q9UIG4 136 aa10.82□□□□□ -0.68
PCDHA13-202ENST00000409494 XIRP2A4UGR9 3374 aa10.81□□□□□ -0.68
PCDHA13-202ENST00000409494 MRPL34Q9BQ48 92 aaKnown RBP10.81□□□□□ -0.68
PCDHA13-202ENST00000409494 A0A1W2PNN7 141 aa10.81□□□□□ -0.68
PCDHA13-202ENST00000409494 CASC10Q5T4H9 136 aa10.81□□□□□ -0.68
PCDHA13-202ENST00000409494 OBSCN-AS1Q96MR7 158 aa10.8□□□□□ -0.68
PCDHA13-202ENST00000409494 SPRR4Q96PI1 79 aa10.8□□□□□ -0.68
PCDHA13-202ENST00000409494 K7EQZ3 153 aa10.78□□□□□ -0.68
PCDHA13-202ENST00000409494 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.68
PCDHA13-202ENST00000409494 Q96NJ1 140 aa10.77□□□□□ -0.68
PCDHA13-202ENST00000409494 IGSF10Q6WRI0 2623 aa10.76□□□□□ -0.69
PCDHA13-202ENST00000409494 PRR15Q8IV56 129 aa10.75□□□□□ -0.69
PCDHA13-202ENST00000409494 SPINK1P00995 79 aa10.74□□□□□ -0.69
PCDHA13-202ENST00000409494 H7BZZ5 65 aa10.73□□□□□ -0.69
PCDHA13-202ENST00000409494 TNP2Q05952 138 aa10.73□□□□□ -0.69
PCDHA13-202ENST00000409494 CD164Q04900 197 aa10.72□□□□□ -0.69
PCDHA13-202ENST00000409494 A0A1B0GVX0 72 aa10.72□□□□□ -0.69
PCDHA13-202ENST00000409494 C8orf17Q9NRJ1 99 aa10.71□□□□□ -0.69
PCDHA13-202ENST00000409494 DSPP15924 2871 aaKnown RBP10.7□□□□□ -0.7
PCDHA13-202ENST00000409494 IGLV5-48A0A075B6I7 105 aa10.69□□□□□ -0.7
PCDHA13-202ENST00000409494 AKAP13Q12802 2813 aa10.68□□□□□ -0.7
PCDHA13-202ENST00000409494 BAHCC1Q9P281 2608 aa10.68□□□□□ -0.7
PCDHA13-202ENST00000409494 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
PCDHA13-202ENST00000409494 SMR3BP02814 79 aaPredicted RBP10.67□□□□□ -0.7
PCDHA13-202ENST00000409494 LAMA1P25391 3075 aa10.67□□□□□ -0.7
PCDHA13-202ENST00000409494 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
PCDHA13-202ENST00000409494 COL6A5A8TX70 2615 aa10.66□□□□□ -0.7
PCDHA13-202ENST00000409494 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
PCDHA13-202ENST00000409494 STAB1Q9NY15 2570 aa10.65□□□□□ -0.7
PCDHA13-202ENST00000409494 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
PCDHA13-202ENST00000409494 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
PCDHA13-202ENST00000409494 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
PCDHA13-202ENST00000409494 TEX15Q9BXT5 2789 aa10.6□□□□□ -0.71
PCDHA13-202ENST00000409494 A0A1B0GU69 56 aa10.6□□□□□ -0.71
PCDHA13-202ENST00000409494 CHD6Q8TD26 2715 aa10.58□□□□□ -0.72
PCDHA13-202ENST00000409494 SZT2Q5T011 3432 aa10.58□□□□□ -0.72
PCDHA13-202ENST00000409494 A0A0G2JQZ4 141 aa10.58□□□□□ -0.72
PCDHA13-202ENST00000409494 VCANP13611 3396 aa10.58□□□□□ -0.72
PCDHA13-202ENST00000409494 NBEAQ8NFP9 2946 aa10.57□□□□□ -0.72
PCDHA13-202ENST00000409494 SETXQ7Z333 2677 aaKnown RBP10.57□□□□□ -0.72
PCDHA13-202ENST00000409494 DNAH14Q0VDD8 3507 aa10.56□□□□□ -0.72
PCDHA13-202ENST00000409494 KRTAP21-3Q3LHN1 58 aa10.56□□□□□ -0.72
PCDHA13-202ENST00000409494 CELSR3Q9NYQ7 3312 aa10.56□□□□□ -0.72
PCDHA13-202ENST00000409494 DSCR10P59022 87 aa10.56□□□□□ -0.72
PCDHA13-202ENST00000409494 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
PCDHA13-202ENST00000409494 A8MUN3 132 aa10.55□□□□□ -0.72
PCDHA13-202ENST00000409494 SPRR1AP35321 89 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms