RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TRBV6-4A0A1B0GX49 114 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 K7EQD1 137 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 IGKV2D-28P01615 120 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 LINC00158P58513 81 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 DAD1P61803 113 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 PRB3Q04118 309 aaPredicted RBP3.75□□□□□ -1.81
CLK1-202ENST00000409403 NREPQ16612 68 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 Q1T7F1 81 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 WFDC9Q8NEX5 89 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 COX7B2Q8TF08 81 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 RHPN1-AS1Q9BWJ2 59 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 HECTD4Q9Y4D8 3996 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 DNAH9Q9NYC9 4486 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 IGHV3-53P01767 116 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 SS18Q15532 418 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 Q6ZQT0 140 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 Q8N814 137 aa3.75□□□□□ -1.81
CLK1-202ENST00000409403 PLCE1Q9P212 2302 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 ARHGAP32A7KAX9 2087 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 E7EQL1 145 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 HAMPP81172 84 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 CASC10Q5T4H9 136 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 C9orf66Q5T8R8 295 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 UNQ9165/PRO28630Q6UXU0 137 aa3.74□□□□□ -1.81
CLK1-202ENST00000409403 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 TRBV10-1A0A0K0K1A3 114 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 G3V318 75 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 C3orf84H3BNL1 204 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 CCL18P55774 89 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 UBE2BP63146 152 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 COX6A2Q02221 97 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 FBXL19-AS1Q494R0 122 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 Q6ZTC4 211 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 C6orf223Q8N319 242 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 C5orf56Q8N8D9 126 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 RETNQ9HD89 108 aa3.73□□□□□ -1.81
CLK1-202ENST00000409403 BPY2O14599 106 aa3.72□□□□□ -1.81
CLK1-202ENST00000409403 UBE2L6O14933 153 aa3.72□□□□□ -1.81
CLK1-202ENST00000409403 MT3P25713 68 aa3.72□□□□□ -1.81
CLK1-202ENST00000409403 C11orf72Q8NBR9 251 aa3.72□□□□□ -1.81
CLK1-202ENST00000409403 TRAV10A0A0B4J240 114 aa3.71□□□□□ -1.81
CLK1-202ENST00000409403 DEFB1P60022 68 aa3.71□□□□□ -1.81
CLK1-202ENST00000409403 NTM-AS1Q6ZSK4 140 aa3.71□□□□□ -1.81
CLK1-202ENST00000409403 C11orf45Q8TAV5 145 aa3.71□□□□□ -1.81
CLK1-202ENST00000409403 BPESC1Q9GZL8 116 aa3.71□□□□□ -1.81
CLK1-202ENST00000409403 CDC42SE2Q9NRR3 84 aa3.71□□□□□ -1.81
CLK1-202ENST00000409403 IGKV3-7A0A075B6H7 116 aa3.71□□□□□ -1.82
CLK1-202ENST00000409403 NDUFS5O43920 106 aa3.71□□□□□ -1.82
CLK1-202ENST00000409403 SPINK13Q1W4C9 94 aa3.71□□□□□ -1.82
CLK1-202ENST00000409403 KPRPQ5T749 579 aaPredicted RBP3.71□□□□□ -1.82
CLK1-202ENST00000409403 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
CLK1-202ENST00000409403 MUC7Q8TAX7 377 aa3.71□□□□□ -1.82
CLK1-202ENST00000409403 DNAH3Q8TD57 4116 aa3.71□□□□□ -1.82
CLK1-202ENST00000409403 IGHV3-73A0A0B4J1V6 119 aa3.7□□□□□ -1.82
CLK1-202ENST00000409403 hDV103S1A0JD37 113 aa3.7□□□□□ -1.82
CLK1-202ENST00000409403 K7EQG2 157 aa3.7□□□□□ -1.82
CLK1-202ENST00000409403 DEFB114Q30KQ6 69 aa3.7□□□□□ -1.82
CLK1-202ENST00000409403 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
CLK1-202ENST00000409403 TM2D3Q9BRN9 247 aa3.7□□□□□ -1.82
CLK1-202ENST00000409403 A8MTW9 85 aa3.69□□□□□ -1.82
CLK1-202ENST00000409403 LYNX1G3V0Z9 82 aa3.69□□□□□ -1.82
CLK1-202ENST00000409403 LYNX1P0DP58 116 aa3.69□□□□□ -1.82
CLK1-202ENST00000409403 UBE2AP49459 152 aa3.69□□□□□ -1.82
CLK1-202ENST00000409403 ESM1Q9NQ30 184 aa3.69□□□□□ -1.82
CLK1-202ENST00000409403 TOMM7Q9P0U1 55 aa3.69□□□□□ -1.82
CLK1-202ENST00000409403 COX17Q14061 63 aa3.68□□□□□ -1.82
CLK1-202ENST00000409403 LINC00575Q6W349 94 aa3.68□□□□□ -1.82
CLK1-202ENST00000409403 DNAH7Q8WXX0 4024 aa3.68□□□□□ -1.82
CLK1-202ENST00000409403 Q6ZTI0 123 aa3.68□□□□□ -1.82
CLK1-202ENST00000409403 Q8NBF4 154 aa3.68□□□□□ -1.82
CLK1-202ENST00000409403 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
CLK1-202ENST00000409403 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CLK1-202ENST00000409403 NDUFB1O75438 58 aa3.67□□□□□ -1.82
CLK1-202ENST00000409403 LY6HO94772 140 aa3.67□□□□□ -1.82
CLK1-202ENST00000409403 INSP01308 110 aa3.67□□□□□ -1.82
CLK1-202ENST00000409403 Q8IZM0 81 aa3.67□□□□□ -1.82
CLK1-202ENST00000409403 CYP4F30PQ9H0H9 118 aa3.67□□□□□ -1.82
CLK1-202ENST00000409403 A0A1B0GW54 56 aa3.66□□□□□ -1.82
CLK1-202ENST00000409403 IGHV3-11P01762 117 aa3.66□□□□□ -1.82
CLK1-202ENST00000409403 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.66□□□□□ -1.82
CLK1-202ENST00000409403 STARD9Q9P2P6 4700 aa3.66□□□□□ -1.82
CLK1-202ENST00000409403 IGHV3OR16-9A0A0B4J2B5 98 aa3.65□□□□□ -1.82
CLK1-202ENST00000409403 COX7BP24311 80 aa3.65□□□□□ -1.82
CLK1-202ENST00000409403 LMO4P61968 165 aa3.65□□□□□ -1.82
CLK1-202ENST00000409403 LIMD2Q9BT23 127 aa3.65□□□□□ -1.82
CLK1-202ENST00000409403 TRAV22A0A0B4J277 110 aa3.65□□□□□ -1.83
CLK1-202ENST00000409403 HTN1P15515 57 aa3.65□□□□□ -1.83
CLK1-202ENST00000409403 C6orf99Q4VX62 202 aa3.65□□□□□ -1.83
CLK1-202ENST00000409403 ATP11AUNQ6ZP68 121 aa3.65□□□□□ -1.83
CLK1-202ENST00000409403 RBM12B-AS1Q9P1G2 102 aa3.65□□□□□ -1.83
CLK1-202ENST00000409403 TRBV6-8A0A0A6YYG3 113 aa3.64□□□□□ -1.83
CLK1-202ENST00000409403 IGKV4-1P06312 121 aa3.64□□□□□ -1.83
CLK1-202ENST00000409403 ELOF1P60002 83 aaKnown RBP3.64□□□□□ -1.83
CLK1-202ENST00000409403 C14orf177Q52M58 125 aa3.64□□□□□ -1.83
CLK1-202ENST00000409403 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
CLK1-202ENST00000409403 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
CLK1-202ENST00000409403 LINC00588Q9Y4M8 146 aa3.64□□□□□ -1.83
CLK1-202ENST00000409403 WNK2Q9Y3S1 2297 aa3.63□□□□□ -1.83
CLK1-202ENST00000409403 K7EIL1 84 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms