RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SPANXDQ9BXN6 97 aa7.4□□□□□ -1.22
SNORD88B-201ENST00000408454 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
SNORD88B-201ENST00000408454 C9orf153Q5TBE3 101 aa7.39□□□□□ -1.23
SNORD88B-201ENST00000408454 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
SNORD88B-201ENST00000408454 IGLV9-49A0A0B4J1Y8 123 aa7.38□□□□□ -1.23
SNORD88B-201ENST00000408454 MOBPQ13875 183 aa7.38□□□□□ -1.23
SNORD88B-201ENST00000408454 Q6ZVH6 145 aa7.38□□□□□ -1.23
SNORD88B-201ENST00000408454 PMCHL2Q9BQD1 86 aa7.38□□□□□ -1.23
SNORD88B-201ENST00000408454 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
SNORD88B-201ENST00000408454 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
SNORD88B-201ENST00000408454 LINC01545Q5VT33 79 aa7.37□□□□□ -1.23
SNORD88B-201ENST00000408454 SCGB1D4Q6XE38 83 aa7.37□□□□□ -1.23
SNORD88B-201ENST00000408454 LAMTOR3Q9UHA4 124 aa7.37□□□□□ -1.23
SNORD88B-201ENST00000408454 LINC00310P59036 64 aa7.36□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 IFITM1P13164 125 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 SNRPEP62304 92 aaKnown RBP7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
SNORD88B-201ENST00000408454 A4D1N5 150 aa7.34□□□□□ -1.23
SNORD88B-201ENST00000408454 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
SNORD88B-201ENST00000408454 NPC2P61916 151 aa7.33□□□□□ -1.24
SNORD88B-201ENST00000408454 SLC7A5P1Q8MH63 180 aa7.33□□□□□ -1.24
SNORD88B-201ENST00000408454 Q9BRP9 147 aa7.33□□□□□ -1.24
SNORD88B-201ENST00000408454 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
SNORD88B-201ENST00000408454 COX7BP24311 80 aa7.31□□□□□ -1.24
SNORD88B-201ENST00000408454 A0A1B0GWB2 263 aa7.3□□□□□ -1.24
SNORD88B-201ENST00000408454 SPRR1BP22528 89 aa7.3□□□□□ -1.24
SNORD88B-201ENST00000408454 KRTDAPP60985 99 aa7.3□□□□□ -1.24
SNORD88B-201ENST00000408454 TAL2Q16559 108 aa7.3□□□□□ -1.24
SNORD88B-201ENST00000408454 COA6Q5JTJ3 125 aaKnown RBP7.3□□□□□ -1.24
SNORD88B-201ENST00000408454 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
SNORD88B-201ENST00000408454 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
SNORD88B-201ENST00000408454 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
SNORD88B-201ENST00000408454 CD164Q04900 197 aa7.29□□□□□ -1.24
SNORD88B-201ENST00000408454 Q8N377 158 aa7.29□□□□□ -1.24
SNORD88B-201ENST00000408454 TRAV13-2A0A0B4J235 113 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 HSBP1L1C9JCN9 74 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 VAMP3Q15836 100 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 PRO1933Q9H354 126 aa7.28□□□□□ -1.24
SNORD88B-201ENST00000408454 C3orf79P0CE67 100 aa7.27□□□□□ -1.25
SNORD88B-201ENST00000408454 C6orf99Q4VX62 202 aa7.27□□□□□ -1.25
SNORD88B-201ENST00000408454 A6NDN8 102 aa7.26□□□□□ -1.25
SNORD88B-201ENST00000408454 LITAFQ99732 161 aa7.26□□□□□ -1.25
SNORD88B-201ENST00000408454 S100A2P29034 98 aa7.25□□□□□ -1.25
SNORD88B-201ENST00000408454 LPAP08519 4548 aa7.24□□□□□ -1.25
SNORD88B-201ENST00000408454 F8WEM9 126 aa7.24□□□□□ -1.25
SNORD88B-201ENST00000408454 H7C2G1 150 aa7.24□□□□□ -1.25
SNORD88B-201ENST00000408454 SNCGO76070 127 aa7.24□□□□□ -1.25
SNORD88B-201ENST00000408454 LINC01547P58512 204 aaPredicted RBP7.24□□□□□ -1.25
SNORD88B-201ENST00000408454 TCL1BO95988 128 aa7.21□□□□□ -1.26
SNORD88B-201ENST00000408454 ST20-AS1Q8NBB2 130 aa7.21□□□□□ -1.26
SNORD88B-201ENST00000408454 DEFB105AQ8NG35 78 aa7.2□□□□□ -1.26
SNORD88B-201ENST00000408454 S100A6P06703 90 aa7.19□□□□□ -1.26
SNORD88B-201ENST00000408454 XP32Q5T750 250 aa7.19□□□□□ -1.26
SNORD88B-201ENST00000408454 Q5XG85 94 aa7.19□□□□□ -1.26
SNORD88B-201ENST00000408454 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
SNORD88B-201ENST00000408454 GHRHP01286 108 aa7.18□□□□□ -1.26
SNORD88B-201ENST00000408454 Q1RN00 199 aa7.17□□□□□ -1.26
SNORD88B-201ENST00000408454 IGLV5-48A0A075B6I7 105 aa7.16□□□□□ -1.26
SNORD88B-201ENST00000408454 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
SNORD88B-201ENST00000408454 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
SNORD88B-201ENST00000408454 BVES-AS1Q5T3Y7 98 aa7.15□□□□□ -1.26
SNORD88B-201ENST00000408454 Q6JHZ5 121 aa7.15□□□□□ -1.26
SNORD88B-201ENST00000408454 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.26
SNORD88B-201ENST00000408454 S100A1P23297 94 aa7.14□□□□□ -1.27
SNORD88B-201ENST00000408454 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
SNORD88B-201ENST00000408454 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
SNORD88B-201ENST00000408454 TTTY13Q9BZ97 58 aa7.14□□□□□ -1.27
SNORD88B-201ENST00000408454 ATOH7Q8N100 152 aa7.13□□□□□ -1.27
SNORD88B-201ENST00000408454 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
SNORD88B-201ENST00000408454 PCP2Q8IVA1 136 aa7.11□□□□□ -1.27
SNORD88B-201ENST00000408454 SMIM11BQ8TCY0 68 aa7.11□□□□□ -1.27
SNORD88B-201ENST00000408454 hADV29S1A0JD25 119 aa7.1□□□□□ -1.27
SNORD88B-201ENST00000408454 OCIAD2Q56VL3 154 aa7.1□□□□□ -1.27
SNORD88B-201ENST00000408454 C12orf57Q99622 126 aa7.09□□□□□ -1.27
SNORD88B-201ENST00000408454 MUC2Q02817 5179 aa7.09□□□□□ -1.28
SNORD88B-201ENST00000408454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.08□□□□□ -1.28
SNORD88B-201ENST00000408454 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
SNORD88B-201ENST00000408454 HIST1H2BLQ99880 126 aa7.08□□□□□ -1.28
SNORD88B-201ENST00000408454 LINC00575Q6W349 94 aa7.07□□□□□ -1.28
SNORD88B-201ENST00000408454 HIST3H2BBQ8N257 126 aa7.07□□□□□ -1.28
SNORD88B-201ENST00000408454 CLEC2BQ92478 149 aa7.07□□□□□ -1.28
SNORD88B-201ENST00000408454 SS18L2Q9UHA2 77 aa7.07□□□□□ -1.28
SNORD88B-201ENST00000408454 SMIM29Q86T20 159 aa7.06□□□□□ -1.28
SNORD88B-201ENST00000408454 SNHG12Q9BXW3 62 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms