RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
SNORD88A-201ENST00000408314 SPINK1P00995 79 aa5.25□□□□□ -1.57
SNORD88A-201ENST00000408314 IGLV6-57P01721 117 aa5.25□□□□□ -1.57
SNORD88A-201ENST00000408314 COPS9Q8WXC6 57 aa5.25□□□□□ -1.57
SNORD88A-201ENST00000408314 CDIP1Q9H305 208 aa5.25□□□□□ -1.57
SNORD88A-201ENST00000408314 SPANXCQ9NY87 97 aa5.25□□□□□ -1.57
SNORD88A-201ENST00000408314 ZNF73O43830 326 aaPredicted RBP5.24□□□□□ -1.57
SNORD88A-201ENST00000408314 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
SNORD88A-201ENST00000408314 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
SNORD88A-201ENST00000408314 Q8NBF4 154 aa5.24□□□□□ -1.57
SNORD88A-201ENST00000408314 RETNLBQ9BQ08 111 aa5.24□□□□□ -1.57
SNORD88A-201ENST00000408314 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
SNORD88A-201ENST00000408314 ZNF815PA8K554 130 aa5.23□□□□□ -1.57
SNORD88A-201ENST00000408314 NPC2P61916 151 aa5.23□□□□□ -1.57
SNORD88A-201ENST00000408314 SLC25A34Q6PIV7 304 aa5.23□□□□□ -1.57
SNORD88A-201ENST00000408314 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
SNORD88A-201ENST00000408314 LINC00518Q8N0U6 118 aa5.23□□□□□ -1.57
SNORD88A-201ENST00000408314 SPANXDQ9BXN6 97 aa5.23□□□□□ -1.57
SNORD88A-201ENST00000408314 COA6Q5JTJ3 125 aaKnown RBP5.22□□□□□ -1.57
SNORD88A-201ENST00000408314 OR13C6PQ8NH95 151 aa5.22□□□□□ -1.57
SNORD88A-201ENST00000408314 LINC00308Q8TCZ7 52 aa5.22□□□□□ -1.57
SNORD88A-201ENST00000408314 IGLV9-49A0A0B4J1Y8 123 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 KRTDAPP60985 99 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 MOBPQ13875 183 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 SOSTDC1Q6X4U4 206 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 SCGB1D4Q6XE38 83 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 Q9BRP9 147 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 DHRS4-AS1Q9P1J3 65 aa5.21□□□□□ -1.58
SNORD88A-201ENST00000408314 C3orf79P0CE67 100 aa5.2□□□□□ -1.58
SNORD88A-201ENST00000408314 Q6ZVH6 145 aa5.2□□□□□ -1.58
SNORD88A-201ENST00000408314 SLC25A20O43772 301 aa5.19□□□□□ -1.58
SNORD88A-201ENST00000408314 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
SNORD88A-201ENST00000408314 SNRPEP62304 92 aaKnown RBP5.19□□□□□ -1.58
SNORD88A-201ENST00000408314 C9orf153Q5TBE3 101 aa5.19□□□□□ -1.58
SNORD88A-201ENST00000408314 LITAFQ99732 161 aa5.19□□□□□ -1.58
SNORD88A-201ENST00000408314 IFITM1P13164 125 aa5.18□□□□□ -1.58
SNORD88A-201ENST00000408314 COX7BP24311 80 aa5.17□□□□□ -1.58
SNORD88A-201ENST00000408314 LAMTOR3Q9UHA4 124 aa5.17□□□□□ -1.58
SNORD88A-201ENST00000408314 TRBV7-6A0A0J9YX20 115 aa5.16□□□□□ -1.58
SNORD88A-201ENST00000408314 EIF4EBP3O60516 100 aaPredicted RBP5.16□□□□□ -1.58
SNORD88A-201ENST00000408314 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
SNORD88A-201ENST00000408314 A0A1B0GWB2 263 aa5.15□□□□□ -1.59
SNORD88A-201ENST00000408314 A4D1N5 150 aa5.15□□□□□ -1.59
SNORD88A-201ENST00000408314 HSBP1L1C9JCN9 74 aa5.15□□□□□ -1.59
SNORD88A-201ENST00000408314 SPRR1BP22528 89 aa5.15□□□□□ -1.59
SNORD88A-201ENST00000408314 ELOF1P60002 83 aaKnown RBP5.15□□□□□ -1.59
SNORD88A-201ENST00000408314 C6orf99Q4VX62 202 aa5.15□□□□□ -1.59
SNORD88A-201ENST00000408314 S100A2P29034 98 aa5.14□□□□□ -1.59
SNORD88A-201ENST00000408314 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
SNORD88A-201ENST00000408314 Q8N377 158 aa5.14□□□□□ -1.59
SNORD88A-201ENST00000408314 TTTY13Q9BZ97 58 aa5.14□□□□□ -1.59
SNORD88A-201ENST00000408314 NHP2Q9NX24 153 aaKnown RBP5.14□□□□□ -1.59
SNORD88A-201ENST00000408314 MUC2Q02817 5179 aa5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 A6NDN8 102 aa5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 TAL2Q16559 108 aa5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 ANKRD39Q53RE8 183 aa5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 ST20-AS1Q8NBB2 130 aa5.13□□□□□ -1.59
SNORD88A-201ENST00000408314 TEX49A0A1B0GTD5 131 aa5.12□□□□□ -1.59
SNORD88A-201ENST00000408314 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
SNORD88A-201ENST00000408314 S100A6P06703 90 aa5.11□□□□□ -1.59
SNORD88A-201ENST00000408314 S100A1P23297 94 aa5.11□□□□□ -1.59
SNORD88A-201ENST00000408314 CD164Q04900 197 aa5.11□□□□□ -1.59
SNORD88A-201ENST00000408314 ATOH7Q8N100 152 aa5.11□□□□□ -1.59
SNORD88A-201ENST00000408314 PRO1933Q9H354 126 aa5.11□□□□□ -1.59
SNORD88A-201ENST00000408314 VAMP3Q15836 100 aa5.1□□□□□ -1.59
SNORD88A-201ENST00000408314 ASB16-AS1Q495Z4 193 aa5.1□□□□□ -1.59
SNORD88A-201ENST00000408314 MUSTN1Q8IVN3 82 aa5.1□□□□□ -1.59
SNORD88A-201ENST00000408314 PCP2Q8IVA1 136 aa5.09□□□□□ -1.59
SNORD88A-201ENST00000408314 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.6
SNORD88A-201ENST00000408314 H7C2G1 150 aa5.08□□□□□ -1.6
SNORD88A-201ENST00000408314 HIST3H2BBQ8N257 126 aa5.08□□□□□ -1.6
SNORD88A-201ENST00000408314 DEFB105AQ8NG35 78 aa5.08□□□□□ -1.6
SNORD88A-201ENST00000408314 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
SNORD88A-201ENST00000408314 IGLV5-48A0A075B6I7 105 aa5.07□□□□□ -1.6
SNORD88A-201ENST00000408314 F8WEM9 126 aa5.07□□□□□ -1.6
SNORD88A-201ENST00000408314 Q1RN00 199 aa5.07□□□□□ -1.6
SNORD88A-201ENST00000408314 XP32Q5T750 250 aa5.05□□□□□ -1.6
SNORD88A-201ENST00000408314 Q5XG85 94 aa5.05□□□□□ -1.6
SNORD88A-201ENST00000408314 HRCT1Q6UXD1 115 aa5.05□□□□□ -1.6
SNORD88A-201ENST00000408314 SMIM11BQ8TCY0 68 aa5.05□□□□□ -1.6
SNORD88A-201ENST00000408314 SNCGO76070 127 aa5.03□□□□□ -1.6
SNORD88A-201ENST00000408314 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
SNORD88A-201ENST00000408314 TCL1BO95988 128 aa5.03□□□□□ -1.6
SNORD88A-201ENST00000408314 LINC01547P58512 204 aaPredicted RBP5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 BVES-AS1Q5T3Y7 98 aa5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 Q6JHZ5 121 aa5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 SMIM29Q86T20 159 aa5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 PPDPFLQ8WWR9 84 aa5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 HIST1H4GQ99525 98 aa5.02□□□□□ -1.61
SNORD88A-201ENST00000408314 hADV29S1A0JD25 119 aa5.01□□□□□ -1.61
SNORD88A-201ENST00000408314 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
SNORD88A-201ENST00000408314 COX8AP10176 69 aa5□□□□□ -1.61
SNORD88A-201ENST00000408314 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5□□□□□ -1.61
SNORD88A-201ENST00000408314 DLEU1O43261 78 aa4.99□□□□□ -1.61
SNORD88A-201ENST00000408314 Q6ZQY7 126 aa4.99□□□□□ -1.61
SNORD88A-201ENST00000408314 C9orf92A6NGG3 77 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms