RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
HERC3-203ENST00000407637 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.07
HERC3-203ENST00000407637 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.07
HERC3-203ENST00000407637 B9D2Q9BPU9 175 aa8.4□□□□□ -1.07
HERC3-203ENST00000407637 NF1P21359 2839 aa8.39□□□□□ -1.07
HERC3-203ENST00000407637 Q8N377 158 aa8.39□□□□□ -1.07
HERC3-203ENST00000407637 LCA10Q71F78 164 aa8.38□□□□□ -1.07
HERC3-203ENST00000407637 IGLV5-48A0A075B6I7 105 aa8.38□□□□□ -1.07
HERC3-203ENST00000407637 NDUFB1O75438 58 aa8.38□□□□□ -1.07
HERC3-203ENST00000407637 C19orf73Q9NVV2 129 aa8.37□□□□□ -1.07
HERC3-203ENST00000407637 NAV2Q8IVL1 2488 aa8.36□□□□□ -1.07
HERC3-203ENST00000407637 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
HERC3-203ENST00000407637 A6NN06 94 aa8.36□□□□□ -1.07
HERC3-203ENST00000407637 ATP11AUNQ6ZP68 121 aa8.35□□□□□ -1.07
HERC3-203ENST00000407637 NDUFS5O43920 106 aa8.35□□□□□ -1.07
HERC3-203ENST00000407637 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
HERC3-203ENST00000407637 A6NED7 52 aa8.34□□□□□ -1.07
HERC3-203ENST00000407637 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
HERC3-203ENST00000407637 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
HERC3-203ENST00000407637 DSCR9P59020 149 aa8.33□□□□□ -1.08
HERC3-203ENST00000407637 USP24Q9UPU5 2620 aa8.33□□□□□ -1.08
HERC3-203ENST00000407637 FSHBP01225 129 aa8.33□□□□□ -1.08
HERC3-203ENST00000407637 Q8NBF4 154 aa8.33□□□□□ -1.08
HERC3-203ENST00000407637 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
HERC3-203ENST00000407637 APOC4P55056 127 aa8.32□□□□□ -1.08
HERC3-203ENST00000407637 MP68P56378 58 aa8.32□□□□□ -1.08
HERC3-203ENST00000407637 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
HERC3-203ENST00000407637 CENPEQ02224 2701 aa8.32□□□□□ -1.08
HERC3-203ENST00000407637 IGSF10Q6WRI0 2623 aa8.32□□□□□ -1.08
HERC3-203ENST00000407637 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
HERC3-203ENST00000407637 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
HERC3-203ENST00000407637 CAMK2N2Q96S95 79 aa8.32□□□□□ -1.08
HERC3-203ENST00000407637 Q75L30 129 aa8.31□□□□□ -1.08
HERC3-203ENST00000407637 FLNCQ14315 2725 aa8.3□□□□□ -1.08
HERC3-203ENST00000407637 A0A1B0GW54 56 aa8.3□□□□□ -1.08
HERC3-203ENST00000407637 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
HERC3-203ENST00000407637 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
HERC3-203ENST00000407637 DEFB4AO15263 64 aa8.29□□□□□ -1.08
HERC3-203ENST00000407637 TNP2Q05952 138 aa8.29□□□□□ -1.08
HERC3-203ENST00000407637 Q9BRP9 147 aa8.29□□□□□ -1.08
HERC3-203ENST00000407637 PRR34Q9NV39 138 aa8.29□□□□□ -1.08
HERC3-203ENST00000407637 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
HERC3-203ENST00000407637 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
HERC3-203ENST00000407637 WFDC10BQ8IUB3 73 aa8.28□□□□□ -1.08
HERC3-203ENST00000407637 X6R8D5 127 aa8.28□□□□□ -1.08
HERC3-203ENST00000407637 IGLV1-51P01701 117 aa8.27□□□□□ -1.09
HERC3-203ENST00000407637 EGFEM1PQ0D2K5 195 aa8.27□□□□□ -1.09
HERC3-203ENST00000407637 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
HERC3-203ENST00000407637 ZNF469Q96JG9 3925 aaPredicted RBP8.25□□□□□ -1.09
HERC3-203ENST00000407637 DNAJC9-AS1A6NH13 148 aa8.25□□□□□ -1.09
HERC3-203ENST00000407637 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
HERC3-203ENST00000407637 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
HERC3-203ENST00000407637 H0Y9P7 68 aa8.24□□□□□ -1.09
HERC3-203ENST00000407637 C7orf33Q8WU49 177 aa8.24□□□□□ -1.09
HERC3-203ENST00000407637 LELP1Q5T871 98 aa8.24□□□□□ -1.09
HERC3-203ENST00000407637 DOPEY1Q5JWR5 2465 aa8.23□□□□□ -1.09
HERC3-203ENST00000407637 A0A0G2JQZ4 141 aa8.23□□□□□ -1.09
HERC3-203ENST00000407637 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
HERC3-203ENST00000407637 MOBPQ13875 183 aa8.23□□□□□ -1.09
HERC3-203ENST00000407637 COA5Q86WW8 74 aa8.23□□□□□ -1.09
HERC3-203ENST00000407637 NKAPP1Q8N9T2 125 aa8.23□□□□□ -1.09
HERC3-203ENST00000407637 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
HERC3-203ENST00000407637 SERTAD4-AS1Q5TG53 156 aa8.22□□□□□ -1.09
HERC3-203ENST00000407637 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
HERC3-203ENST00000407637 HTN3P15516 51 aa8.22□□□□□ -1.09
HERC3-203ENST00000407637 MYO18BQ8IUG5 2567 aa8.22□□□□□ -1.09
HERC3-203ENST00000407637 Q6ZRX8 168 aa8.21□□□□□ -1.09
HERC3-203ENST00000407637 DHRS4-AS1Q9P1J3 65 aa8.21□□□□□ -1.09
HERC3-203ENST00000407637 F8P00451 2351 aa8.21□□□□□ -1.1
HERC3-203ENST00000407637 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
HERC3-203ENST00000407637 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
HERC3-203ENST00000407637 C15orf56Q8N910 161 aa8.2□□□□□ -1.1
HERC3-203ENST00000407637 RPL37AP61513 92 aaKnown RBP8.19□□□□□ -1.1
HERC3-203ENST00000407637 ZNF462Q96JM2 2506 aa8.19□□□□□ -1.1
HERC3-203ENST00000407637 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
HERC3-203ENST00000407637 ABCA12Q86UK0 2595 aa8.18□□□□□ -1.1
HERC3-203ENST00000407637 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
HERC3-203ENST00000407637 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
HERC3-203ENST00000407637 UNC79Q9P2D8 2635 aa8.17□□□□□ -1.1
HERC3-203ENST00000407637 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
HERC3-203ENST00000407637 CCDC168Q8NDH2 2452 aa8.16□□□□□ -1.1
HERC3-203ENST00000407637 DEFB135Q30KP9 77 aa8.16□□□□□ -1.1
HERC3-203ENST00000407637 KRTAP4-16G5E9R7 235 aaPredicted RBP8.16□□□□□ -1.1
HERC3-203ENST00000407637 H3BPC8 53 aa8.16□□□□□ -1.1
HERC3-203ENST00000407637 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
HERC3-203ENST00000407637 HIVEP2P31629 2446 aa8.15□□□□□ -1.1
HERC3-203ENST00000407637 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
HERC3-203ENST00000407637 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
HERC3-203ENST00000407637 FAM208BQ5VWN6 2430 aa8.14□□□□□ -1.11
HERC3-203ENST00000407637 SPINK7P58062 85 aa8.14□□□□□ -1.11
HERC3-203ENST00000407637 A0A087WSZ3 146 aa8.13□□□□□ -1.11
HERC3-203ENST00000407637 MTORP42345 2549 aa8.13□□□□□ -1.11
HERC3-203ENST00000407637 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
HERC3-203ENST00000407637 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
HERC3-203ENST00000407637 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
HERC3-203ENST00000407637 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
HERC3-203ENST00000407637 PLAC8Q9NZF1 115 aa8.11□□□□□ -1.11
HERC3-203ENST00000407637 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
HERC3-203ENST00000407637 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
HERC3-203ENST00000407637 IGLV1-50A0A075B6I6 118 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms