RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 TRAPPC1Q9Y5R8 145 aa4.92□□□□□ -1.62
NUP43-204ENST00000403890 HERV-K104P63124 156 aa4.91□□□□□ -1.62
NUP43-204ENST00000403890 GAGE2AQ6NT46 116 aa4.91□□□□□ -1.62
NUP43-204ENST00000403890 KCNQ1DNQ9H478 68 aa4.91□□□□□ -1.62
NUP43-204ENST00000403890 C11orf86A6NJI1 115 aa4.9□□□□□ -1.63
NUP43-204ENST00000403890 SMIM13P0DJ93 91 aa4.9□□□□□ -1.63
NUP43-204ENST00000403890 RPS10P5Q9NQ39 176 aa4.9□□□□□ -1.63
NUP43-204ENST00000403890 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 NCR3O14931 201 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 IGLV6-57P01721 117 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
NUP43-204ENST00000403890 PMCHL1Q16048 86 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 MIR7-3HGQ8N6C7 128 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 Q8NDZ9 215 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 C18orf32Q8TCD1 76 aa4.88□□□□□ -1.63
NUP43-204ENST00000403890 TRAV12-1A0A0B4J245 112 aa4.87□□□□□ -1.63
NUP43-204ENST00000403890 SPRR1AP35321 89 aa4.87□□□□□ -1.63
NUP43-204ENST00000403890 HINT1P49773 126 aaPredicted RBP4.87□□□□□ -1.63
NUP43-204ENST00000403890 RHEBQ15382 184 aa4.87□□□□□ -1.63
NUP43-204ENST00000403890 Q6Q795 121 aa4.87□□□□□ -1.63
NUP43-204ENST00000403890 LINC00846Q9NV44 126 aa4.87□□□□□ -1.63
NUP43-204ENST00000403890 A0A096LNJ9 63 aa4.86□□□□□ -1.63
NUP43-204ENST00000403890 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
NUP43-204ENST00000403890 DDTP30046 118 aa4.86□□□□□ -1.63
NUP43-204ENST00000403890 S100A7L2Q5SY68 101 aa4.86□□□□□ -1.63
NUP43-204ENST00000403890 IFI27L1Q96BM0 104 aa4.86□□□□□ -1.63
NUP43-204ENST00000403890 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
NUP43-204ENST00000403890 B5MCH6 92 aa4.85□□□□□ -1.63
NUP43-204ENST00000403890 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
NUP43-204ENST00000403890 IFITM2Q01629 132 aa4.85□□□□□ -1.63
NUP43-204ENST00000403890 C9orf153Q5TBE3 101 aa4.85□□□□□ -1.63
NUP43-204ENST00000403890 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
NUP43-204ENST00000403890 URB1-AS1Q96HZ7 61 aa4.85□□□□□ -1.63
NUP43-204ENST00000403890 CBY1Q9Y3M2 126 aa4.85□□□□□ -1.63
NUP43-204ENST00000403890 COMMD7Q86VX2 200 aa4.84□□□□□ -1.63
NUP43-204ENST00000403890 LIMD2Q9BT23 127 aa4.84□□□□□ -1.63
NUP43-204ENST00000403890 TRBV10-2A0A0K0K1G8 114 aa4.83□□□□□ -1.64
NUP43-204ENST00000403890 ERC2-IT1O76042 136 aa4.83□□□□□ -1.64
NUP43-204ENST00000403890 SLC25A34Q6PIV7 304 aa4.83□□□□□ -1.64
NUP43-204ENST00000403890 HSBP1O75506 76 aa4.82□□□□□ -1.64
NUP43-204ENST00000403890 HERVK_113P61574 105 aa4.82□□□□□ -1.64
NUP43-204ENST00000403890 NDUFA5Q16718 116 aa4.82□□□□□ -1.64
NUP43-204ENST00000403890 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 C5orf52A6NGY3 159 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 H0Y8G0 127 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 LEPROTO15243 131 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 SNAPINO95295 136 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 C10orf91Q5T1B1 145 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 Q6ZRX8 168 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
NUP43-204ENST00000403890 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
NUP43-204ENST00000403890 NEBP20929 6669 aa4.8□□□□□ -1.64
NUP43-204ENST00000403890 NDUFC2O95298 119 aa4.8□□□□□ -1.64
NUP43-204ENST00000403890 MT2AP02795 61 aa4.8□□□□□ -1.64
NUP43-204ENST00000403890 LGALS3P17931 250 aaKnown RBP4.8□□□□□ -1.64
NUP43-204ENST00000403890 NMUP48645 174 aa4.8□□□□□ -1.64
NUP43-204ENST00000403890 TRAV23DV6A0A075B6W5 121 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 LEPROTL1O95214 131 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 APOC3P02656 99 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 HRCT1Q6UXD1 115 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 Q9BRP9 147 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 LAMTOR3Q9UHA4 124 aa4.79□□□□□ -1.64
NUP43-204ENST00000403890 J3QQQ9 107 aa4.78□□□□□ -1.64
NUP43-204ENST00000403890 ZNF73O43830 326 aaPredicted RBP4.78□□□□□ -1.64
NUP43-204ENST00000403890 PLNP26678 52 aa4.78□□□□□ -1.64
NUP43-204ENST00000403890 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
NUP43-204ENST00000403890 SVBPQ8N300 66 aa4.78□□□□□ -1.64
NUP43-204ENST00000403890 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
NUP43-204ENST00000403890 OR13C6PQ8NH95 151 aa4.77□□□□□ -1.65
NUP43-204ENST00000403890 HSPB8Q9UJY1 196 aa4.77□□□□□ -1.65
NUP43-204ENST00000403890 DPM2O94777 84 aa4.76□□□□□ -1.65
NUP43-204ENST00000403890 MT1FP04733 61 aa4.76□□□□□ -1.65
NUP43-204ENST00000403890 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
NUP43-204ENST00000403890 TAL2Q16559 108 aa4.76□□□□□ -1.65
NUP43-204ENST00000403890 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
NUP43-204ENST00000403890 DHRS4-AS1Q9P1J3 65 aa4.76□□□□□ -1.65
NUP43-204ENST00000403890 C20orf202A1L168 122 aa4.75□□□□□ -1.65
NUP43-204ENST00000403890 IGKCP01834 107 aa4.75□□□□□ -1.65
NUP43-204ENST00000403890 NPC2P61916 151 aa4.75□□□□□ -1.65
NUP43-204ENST00000403890 ST20-AS1Q8NBB2 130 aa4.75□□□□□ -1.65
NUP43-204ENST00000403890 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
NUP43-204ENST00000403890 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
NUP43-204ENST00000403890 PRO1933Q9H354 126 aa4.74□□□□□ -1.65
NUP43-204ENST00000403890 FABP4P15090 132 aa4.73□□□□□ -1.65
NUP43-204ENST00000403890 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
NUP43-204ENST00000403890 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
NUP43-204ENST00000403890 H7C2G1 150 aa4.72□□□□□ -1.65
NUP43-204ENST00000403890 SPRR1BP22528 89 aa4.72□□□□□ -1.65
NUP43-204ENST00000403890 AKR1D1P51857 326 aa4.72□□□□□ -1.65
NUP43-204ENST00000403890 TSPEAR-AS2P59090 65 aa4.72□□□□□ -1.65
NUP43-204ENST00000403890 CD164Q04900 197 aa4.72□□□□□ -1.65
NUP43-204ENST00000403890 DEFB105AQ8NG35 78 aa4.72□□□□□ -1.65
NUP43-204ENST00000403890 A0A0J9YXY3 114 aa4.71□□□□□ -1.66
NUP43-204ENST00000403890 TEX49A0A1B0GTD5 131 aa4.71□□□□□ -1.66
NUP43-204ENST00000403890 ATP11AUNQ6ZP68 121 aa4.71□□□□□ -1.66
NUP43-204ENST00000403890 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
NUP43-204ENST00000403890 TRGC2P03986 189 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms