RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 LINC00336Q6ZUF6 198 aa6.1□□□□□ -1.43
HPS4-203ENST00000402105 Q6ZTC4 211 aa6.1□□□□□ -1.43
HPS4-203ENST00000402105 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
HPS4-203ENST00000402105 M0R378 163 aa6.09□□□□□ -1.43
HPS4-203ENST00000402105 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
HPS4-203ENST00000402105 TRBV7-6A0A0J9YX20 115 aa6.09□□□□□ -1.43
HPS4-203ENST00000402105 CXCL6P80162 114 aa6.09□□□□□ -1.43
HPS4-203ENST00000402105 HIGD2AQ9BW72 106 aa6.09□□□□□ -1.43
HPS4-203ENST00000402105 NDUFC2-KCTD14E9PQ53 114 aa6.08□□□□□ -1.44
HPS4-203ENST00000402105 VPREB1P12018 145 aa6.08□□□□□ -1.44
HPS4-203ENST00000402105 Q6ZRP5 223 aa6.08□□□□□ -1.44
HPS4-203ENST00000402105 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
HPS4-203ENST00000402105 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
HPS4-203ENST00000402105 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
HPS4-203ENST00000402105 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
HPS4-203ENST00000402105 PRR34Q9NV39 138 aa6.07□□□□□ -1.44
HPS4-203ENST00000402105 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
HPS4-203ENST00000402105 FAM168BA1KXE4 195 aa6.06□□□□□ -1.44
HPS4-203ENST00000402105 SYCNQ0VAF6 134 aa6.06□□□□□ -1.44
HPS4-203ENST00000402105 KLKP1Q107X0 134 aa6.06□□□□□ -1.44
HPS4-203ENST00000402105 ST20-AS1Q8NBB2 130 aa6.06□□□□□ -1.44
HPS4-203ENST00000402105 UBE2BP63146 152 aa6.06□□□□□ -1.44
HPS4-203ENST00000402105 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
HPS4-203ENST00000402105 EGFEM1PQ0D2K5 195 aa6.05□□□□□ -1.44
HPS4-203ENST00000402105 ESRGQ1W209 222 aa6.05□□□□□ -1.44
HPS4-203ENST00000402105 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
HPS4-203ENST00000402105 ETDCA0A1B0GVM5 59 aa6.05□□□□□ -1.44
HPS4-203ENST00000402105 FUSP35637 526 aaKnown RBP eCLIP6.05□□□□□ -1.44
HPS4-203ENST00000402105 SMIM29Q86T20 159 aa6.05□□□□□ -1.44
HPS4-203ENST00000402105 LINC00528Q8N1L1 170 aa6.05□□□□□ -1.44
HPS4-203ENST00000402105 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
HPS4-203ENST00000402105 C15orf56Q8N910 161 aa6.04□□□□□ -1.44
HPS4-203ENST00000402105 STAB1Q9NY15 2570 aa6.04□□□□□ -1.44
HPS4-203ENST00000402105 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
HPS4-203ENST00000402105 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
HPS4-203ENST00000402105 FAM229BQ4G0N7 80 aa6.03□□□□□ -1.44
HPS4-203ENST00000402105 PRYO14603 147 aa6.03□□□□□ -1.44
HPS4-203ENST00000402105 IGKV4-1P06312 121 aa6.03□□□□□ -1.44
HPS4-203ENST00000402105 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
HPS4-203ENST00000402105 DEFB131BA0A096LNP1 70 aa6.02□□□□□ -1.45
HPS4-203ENST00000402105 GVQW2A0A096LPI5 108 aaPredicted RBP6.02□□□□□ -1.45
HPS4-203ENST00000402105 H3BQ85 93 aa6.02□□□□□ -1.45
HPS4-203ENST00000402105 Q8N377 158 aa6.02□□□□□ -1.45
HPS4-203ENST00000402105 NBEAL1Q6ZS30 2694 aa6.02□□□□□ -1.45
HPS4-203ENST00000402105 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
HPS4-203ENST00000402105 C1orf137Q5JT78 98 aa6.01□□□□□ -1.45
HPS4-203ENST00000402105 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
HPS4-203ENST00000402105 A0A096LNI7 61 aa6□□□□□ -1.45
HPS4-203ENST00000402105 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
HPS4-203ENST00000402105 NSD1Q96L73 2696 aaPredicted RBP6□□□□□ -1.45
HPS4-203ENST00000402105 NDUFC1O43677 76 aa6□□□□□ -1.45
HPS4-203ENST00000402105 CASC10Q5T4H9 136 aa6□□□□□ -1.45
HPS4-203ENST00000402105 ANK3Q12955 4377 aaKnown RBP5.99□□□□□ -1.45
HPS4-203ENST00000402105 C11orf45Q8TAV5 145 aa5.98□□□□□ -1.45
HPS4-203ENST00000402105 BCE1O60756 84 aa5.98□□□□□ -1.45
HPS4-203ENST00000402105 ERC2-IT1O76042 136 aa5.98□□□□□ -1.45
HPS4-203ENST00000402105 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
HPS4-203ENST00000402105 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
HPS4-203ENST00000402105 A0A1W2PNM2 257 aa5.97□□□□□ -1.45
HPS4-203ENST00000402105 K7EQZ3 153 aa5.96□□□□□ -1.45
HPS4-203ENST00000402105 PSPHP1O15172 72 aa5.96□□□□□ -1.45
HPS4-203ENST00000402105 OCR1Q9BZK8 76 aa5.96□□□□□ -1.45
HPS4-203ENST00000402105 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
HPS4-203ENST00000402105 Q9BRP9 147 aa5.96□□□□□ -1.46
HPS4-203ENST00000402105 PRLHP81277 87 aa5.95□□□□□ -1.46
HPS4-203ENST00000402105 KRTAP26-1Q6PEX3 210 aa5.95□□□□□ -1.46
HPS4-203ENST00000402105 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
HPS4-203ENST00000402105 Q6ZRX8 168 aa5.94□□□□□ -1.46
HPS4-203ENST00000402105 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.94□□□□□ -1.46
HPS4-203ENST00000402105 KCNQ1DNQ9H478 68 aa5.94□□□□□ -1.46
HPS4-203ENST00000402105 WIPF1O43516 503 aa5.93□□□□□ -1.46
HPS4-203ENST00000402105 KRTAP10-11P60412 298 aa5.93□□□□□ -1.46
HPS4-203ENST00000402105 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
HPS4-203ENST00000402105 A0A087WSZ3 146 aa5.92□□□□□ -1.46
HPS4-203ENST00000402105 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
HPS4-203ENST00000402105 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
HPS4-203ENST00000402105 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
HPS4-203ENST00000402105 Q8NBF4 154 aa5.91□□□□□ -1.46
HPS4-203ENST00000402105 PSCAO43653 123 aa5.91□□□□□ -1.46
HPS4-203ENST00000402105 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
HPS4-203ENST00000402105 IGLV1-50A0A075B6I6 118 aa5.9□□□□□ -1.46
HPS4-203ENST00000402105 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.46
HPS4-203ENST00000402105 CSMD3Q7Z407 3707 aa5.9□□□□□ -1.46
HPS4-203ENST00000402105 LINC00208Q96KT6 92 aa5.9□□□□□ -1.47
HPS4-203ENST00000402105 DSCR10P59022 87 aa5.9□□□□□ -1.47
HPS4-203ENST00000402105 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.47
HPS4-203ENST00000402105 IGLV5-48A0A075B6I7 105 aa5.89□□□□□ -1.47
HPS4-203ENST00000402105 C1orf195Q5TG92 126 aa5.88□□□□□ -1.47
HPS4-203ENST00000402105 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
HPS4-203ENST00000402105 LINC00588Q9Y4M8 146 aa5.88□□□□□ -1.47
HPS4-203ENST00000402105 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
HPS4-203ENST00000402105 UBE2AP49459 152 aa5.87□□□□□ -1.47
HPS4-203ENST00000402105 MP68P56378 58 aa5.86□□□□□ -1.47
HPS4-203ENST00000402105 H0Y9J4 135 aa5.86□□□□□ -1.47
HPS4-203ENST00000402105 CHTF8P0CG12 524 aa5.86□□□□□ -1.47
HPS4-203ENST00000402105 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
HPS4-203ENST00000402105 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
HPS4-203ENST00000402105 H3BNG1 76 aa5.84□□□□□ -1.47
HPS4-203ENST00000402105 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
HPS4-203ENST00000402105 DNAH10OSP0CZ25 163 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms