RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.38
LINC00544-201ENST00000400540 NPC2P61916 151 aa6.46□□□□□ -1.38
LINC00544-201ENST00000400540 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.38
LINC00544-201ENST00000400540 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
LINC00544-201ENST00000400540 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
LINC00544-201ENST00000400540 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
LINC00544-201ENST00000400540 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
LINC00544-201ENST00000400540 MIEN1Q9BRT3 115 aa6.45□□□□□ -1.38
LINC00544-201ENST00000400540 J3QQQ9 107 aa6.44□□□□□ -1.38
LINC00544-201ENST00000400540 NDUFC2O95298 119 aa6.44□□□□□ -1.38
LINC00544-201ENST00000400540 HSBP1O75506 76 aa6.43□□□□□ -1.38
LINC00544-201ENST00000400540 YPEL4Q96NS1 127 aa6.43□□□□□ -1.38
LINC00544-201ENST00000400540 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
LINC00544-201ENST00000400540 APOC3P02656 99 aa6.42□□□□□ -1.38
LINC00544-201ENST00000400540 ADAMTSL4-AS1Q5T5F5 129 aa6.42□□□□□ -1.38
LINC00544-201ENST00000400540 PMCHL2Q9BQD1 86 aa6.42□□□□□ -1.38
LINC00544-201ENST00000400540 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
LINC00544-201ENST00000400540 SPRR1BP22528 89 aa6.4□□□□□ -1.38
LINC00544-201ENST00000400540 PLNP26678 52 aa6.4□□□□□ -1.38
LINC00544-201ENST00000400540 NMUP48645 174 aa6.4□□□□□ -1.38
LINC00544-201ENST00000400540 LINC00310P59036 64 aa6.4□□□□□ -1.38
LINC00544-201ENST00000400540 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
LINC00544-201ENST00000400540 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
LINC00544-201ENST00000400540 C5orf52A6NGY3 159 aa6.38□□□□□ -1.39
LINC00544-201ENST00000400540 H7C2G1 150 aa6.38□□□□□ -1.39
LINC00544-201ENST00000400540 M0R2T5 61 aa6.38□□□□□ -1.39
LINC00544-201ENST00000400540 DPM2O94777 84 aa6.38□□□□□ -1.39
LINC00544-201ENST00000400540 SNAPINO95295 136 aa6.38□□□□□ -1.39
LINC00544-201ENST00000400540 HERVK_113P61574 105 aa6.38□□□□□ -1.39
LINC00544-201ENST00000400540 SERF1AO75920 110 aa6.37□□□□□ -1.39
LINC00544-201ENST00000400540 IGKCP01834 107 aa6.37□□□□□ -1.39
LINC00544-201ENST00000400540 SVBPQ8N300 66 aa6.37□□□□□ -1.39
LINC00544-201ENST00000400540 FABP4P15090 132 aa6.36□□□□□ -1.39
LINC00544-201ENST00000400540 HINT1P49773 126 aaPredicted RBP6.36□□□□□ -1.39
LINC00544-201ENST00000400540 Q1RN00 199 aa6.36□□□□□ -1.39
LINC00544-201ENST00000400540 OR13C6PQ8NH95 151 aa6.36□□□□□ -1.39
LINC00544-201ENST00000400540 LAMTOR3Q9UHA4 124 aa6.36□□□□□ -1.39
LINC00544-201ENST00000400540 SLC25A34Q6PIV7 304 aa6.35□□□□□ -1.39
LINC00544-201ENST00000400540 DHRS4-AS1Q9P1J3 65 aa6.35□□□□□ -1.39
LINC00544-201ENST00000400540 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 TRGC2P03986 189 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.39
LINC00544-201ENST00000400540 NDUFA5Q16718 116 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 DEFB105AQ8NG35 78 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 LITAFQ99732 161 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
LINC00544-201ENST00000400540 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
LINC00544-201ENST00000400540 C1orf195Q5TG92 126 aa6.33□□□□□ -1.4
LINC00544-201ENST00000400540 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
LINC00544-201ENST00000400540 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
LINC00544-201ENST00000400540 E9PLD3 99 aa6.32□□□□□ -1.4
LINC00544-201ENST00000400540 COX7BP24311 80 aa6.32□□□□□ -1.4
LINC00544-201ENST00000400540 CD164Q04900 197 aa6.32□□□□□ -1.4
LINC00544-201ENST00000400540 PRO1933Q9H354 126 aa6.32□□□□□ -1.4
LINC00544-201ENST00000400540 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
LINC00544-201ENST00000400540 TAL2Q16559 108 aa6.31□□□□□ -1.4
LINC00544-201ENST00000400540 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
LINC00544-201ENST00000400540 SMIM29Q86T20 159 aa6.31□□□□□ -1.4
LINC00544-201ENST00000400540 USH2AO75445 5202 aa6.31□□□□□ -1.4
LINC00544-201ENST00000400540 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
LINC00544-201ENST00000400540 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
LINC00544-201ENST00000400540 TEX49A0A1B0GTD5 131 aa6.29□□□□□ -1.4
LINC00544-201ENST00000400540 Q5XG85 94 aa6.29□□□□□ -1.4
LINC00544-201ENST00000400540 TTTY13Q9BZ97 58 aa6.28□□□□□ -1.4
LINC00544-201ENST00000400540 TIMM17BO60830 172 aa6.27□□□□□ -1.41
LINC00544-201ENST00000400540 AKR1D1P51857 326 aa6.27□□□□□ -1.41
LINC00544-201ENST00000400540 IGLV5-48A0A075B6I7 105 aa6.25□□□□□ -1.41
LINC00544-201ENST00000400540 ZNF815PA8K554 130 aa6.25□□□□□ -1.41
LINC00544-201ENST00000400540 SYS1-DBNDD2H3BUS1 97 aa6.23□□□□□ -1.41
LINC00544-201ENST00000400540 LINC00518Q8N0U6 118 aa6.23□□□□□ -1.41
LINC00544-201ENST00000400540 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
LINC00544-201ENST00000400540 A0A1B0GWB2 263 aa6.22□□□□□ -1.41
LINC00544-201ENST00000400540 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
LINC00544-201ENST00000400540 Q6Q795 121 aa6.22□□□□□ -1.41
LINC00544-201ENST00000400540 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
LINC00544-201ENST00000400540 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
LINC00544-201ENST00000400540 COLCA2A8K830 154 aa6.19□□□□□ -1.42
LINC00544-201ENST00000400540 TCL1BO95988 128 aa6.19□□□□□ -1.42
LINC00544-201ENST00000400540 A6NDN8 102 aa6.18□□□□□ -1.42
LINC00544-201ENST00000400540 PCP2Q8IVA1 136 aa6.17□□□□□ -1.42
LINC00544-201ENST00000400540 SCGB1D4Q6XE38 83 aa6.16□□□□□ -1.42
LINC00544-201ENST00000400540 OBSCN-AS1Q96MR7 158 aa6.16□□□□□ -1.42
LINC00544-201ENST00000400540 PET117Q6UWS5 81 aa6.15□□□□□ -1.42
LINC00544-201ENST00000400540 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
LINC00544-201ENST00000400540 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
LINC00544-201ENST00000400540 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.43
LINC00544-201ENST00000400540 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
LINC00544-201ENST00000400540 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
LINC00544-201ENST00000400540 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
LINC00544-201ENST00000400540 Q75L30 129 aa6.14□□□□□ -1.43
LINC00544-201ENST00000400540 MUSTN1Q8IVN3 82 aa6.14□□□□□ -1.43
LINC00544-201ENST00000400540 A4D1N5 150 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 F8WEM9 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BKO60814 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BJP06899 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BOP23527 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BBP33778 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BDP58876 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BCP62807 126 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms