RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TNP2Q05952 138 aa5.89□□□□□ -1.47
CACNA1C-220ENST00000399655 SPRNQ5BIV9 151 aa5.89□□□□□ -1.47
CACNA1C-220ENST00000399655 THSD7BQ9C0I4 1608 aa5.88□□□□□ -1.47
CACNA1C-220ENST00000399655 H3BNG1 76 aa5.88□□□□□ -1.47
CACNA1C-220ENST00000399655 IGLV1-51P01701 117 aa5.87□□□□□ -1.47
CACNA1C-220ENST00000399655 OBSCN-AS1Q96MR7 158 aa5.87□□□□□ -1.47
CACNA1C-220ENST00000399655 C10orf99Q6UWK7 81 aa5.87□□□□□ -1.47
CACNA1C-220ENST00000399655 LINC01546A6NGU7 62 aa5.86□□□□□ -1.47
CACNA1C-220ENST00000399655 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
CACNA1C-220ENST00000399655 RTL8CO15255 209 aa5.84□□□□□ -1.47
CACNA1C-220ENST00000399655 ZNF580Q9UK33 172 aa5.84□□□□□ -1.47
CACNA1C-220ENST00000399655 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.48
CACNA1C-220ENST00000399655 BRI3O95415 125 aa5.84□□□□□ -1.48
CACNA1C-220ENST00000399655 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.48
CACNA1C-220ENST00000399655 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.48
CACNA1C-220ENST00000399655 Q8NA96 180 aa5.83□□□□□ -1.48
CACNA1C-220ENST00000399655 CHD6Q8TD26 2715 aa5.83□□□□□ -1.48
CACNA1C-220ENST00000399655 CDSNQ15517 529 aa5.82□□□□□ -1.48
CACNA1C-220ENST00000399655 UNC79Q9P2D8 2635 aa5.82□□□□□ -1.48
CACNA1C-220ENST00000399655 ODF3L2Q3SX64 289 aa5.82□□□□□ -1.48
CACNA1C-220ENST00000399655 PLA2G5P39877 138 aa5.81□□□□□ -1.48
CACNA1C-220ENST00000399655 FHL3Q13643 280 aa5.81□□□□□ -1.48
CACNA1C-220ENST00000399655 DSCR10P59022 87 aa5.81□□□□□ -1.48
CACNA1C-220ENST00000399655 GAS8-AS1O95177 125 aa5.8□□□□□ -1.48
CACNA1C-220ENST00000399655 NSD1Q96L73 2696 aaPredicted RBP5.8□□□□□ -1.48
CACNA1C-220ENST00000399655 TEP1Q99973 2627 aaKnown RBP5.8□□□□□ -1.48
CACNA1C-220ENST00000399655 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
CACNA1C-220ENST00000399655 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
CACNA1C-220ENST00000399655 U3KQA8 63 aa5.79□□□□□ -1.48
CACNA1C-220ENST00000399655 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
CACNA1C-220ENST00000399655 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
CACNA1C-220ENST00000399655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
CACNA1C-220ENST00000399655 PHF5AQ7RTV0 110 aaKnown RBP5.78□□□□□ -1.48
CACNA1C-220ENST00000399655 ITPR3Q14573 2671 aa5.77□□□□□ -1.49
CACNA1C-220ENST00000399655 M0R2T5 61 aa5.77□□□□□ -1.49
CACNA1C-220ENST00000399655 LINC01558Q9Y6Z2 57 aa5.77□□□□□ -1.49
CACNA1C-220ENST00000399655 ZNF295-AS1Q8N0V1 137 aa5.77□□□□□ -1.49
CACNA1C-220ENST00000399655 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
CACNA1C-220ENST00000399655 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
CACNA1C-220ENST00000399655 C16orf95Q9H693 158 aa5.76□□□□□ -1.49
CACNA1C-220ENST00000399655 ROMO1P60602 79 aa5.76□□□□□ -1.49
CACNA1C-220ENST00000399655 Q6ZSA8 131 aa5.76□□□□□ -1.49
CACNA1C-220ENST00000399655 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
CACNA1C-220ENST00000399655 KCNQ1DNQ9H478 68 aa5.75□□□□□ -1.49
CACNA1C-220ENST00000399655 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
CACNA1C-220ENST00000399655 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
CACNA1C-220ENST00000399655 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
CACNA1C-220ENST00000399655 ZNF861PO60384 105 aa5.74□□□□□ -1.49
CACNA1C-220ENST00000399655 LINC00310P59036 64 aa5.74□□□□□ -1.49
CACNA1C-220ENST00000399655 Q8NAQ8 132 aa5.73□□□□□ -1.49
CACNA1C-220ENST00000399655 Q8N1X5 172 aa5.72□□□□□ -1.49
CACNA1C-220ENST00000399655 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
CACNA1C-220ENST00000399655 URB1-AS1Q96HZ7 61 aa5.72□□□□□ -1.49
CACNA1C-220ENST00000399655 R4GN34 69 aa5.71□□□□□ -1.49
CACNA1C-220ENST00000399655 FLNBO75369 2602 aaKnown RBP5.71□□□□□ -1.49
CACNA1C-220ENST00000399655 MUC22E2RYF6 1773 aaPredicted RBP5.71□□□□□ -1.5
CACNA1C-220ENST00000399655 C18orf65Q6ZTR6 163 aa5.71□□□□□ -1.5
CACNA1C-220ENST00000399655 S4R3F8 94 aa5.71□□□□□ -1.5
CACNA1C-220ENST00000399655 LINC00315P59091 139 aa5.71□□□□□ -1.5
CACNA1C-220ENST00000399655 DNAH10OSP0CZ25 163 aa5.7□□□□□ -1.5
CACNA1C-220ENST00000399655 PRR34Q9NV39 138 aa5.7□□□□□ -1.5
CACNA1C-220ENST00000399655 A0A096LNJ9 63 aa5.7□□□□□ -1.5
CACNA1C-220ENST00000399655 GCN1Q92616 2671 aaKnown RBP5.7□□□□□ -1.5
CACNA1C-220ENST00000399655 COL6A5A8TX70 2615 aa5.7□□□□□ -1.5
CACNA1C-220ENST00000399655 IGSF10Q6WRI0 2623 aa5.7□□□□□ -1.5
CACNA1C-220ENST00000399655 Q6ZSN1 163 aa5.69□□□□□ -1.5
CACNA1C-220ENST00000399655 LINC00528Q8N1L1 170 aa5.68□□□□□ -1.5
CACNA1C-220ENST00000399655 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
CACNA1C-220ENST00000399655 IGLV1-50A0A075B6I6 118 aa5.66□□□□□ -1.5
CACNA1C-220ENST00000399655 PRR26Q8N8Z3 221 aa5.65□□□□□ -1.51
CACNA1C-220ENST00000399655 COL4A4P53420 1690 aaPredicted RBP5.64□□□□□ -1.51
CACNA1C-220ENST00000399655 OCR1Q9BZK8 76 aa5.64□□□□□ -1.51
CACNA1C-220ENST00000399655 C19orf73Q9NVV2 129 aa5.63□□□□□ -1.51
CACNA1C-220ENST00000399655 ITPR2Q14571 2701 aa5.63□□□□□ -1.51
CACNA1C-220ENST00000399655 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
CACNA1C-220ENST00000399655 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
CACNA1C-220ENST00000399655 WWC2-AS2Q96NR7 200 aa5.6□□□□□ -1.51
CACNA1C-220ENST00000399655 FP248Q71RG6 208 aaPredicted RBP5.6□□□□□ -1.51
CACNA1C-220ENST00000399655 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
CACNA1C-220ENST00000399655 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.51
CACNA1C-220ENST00000399655 A0A1W2PNM2 257 aa5.58□□□□□ -1.52
CACNA1C-220ENST00000399655 Q8N377 158 aa5.58□□□□□ -1.52
CACNA1C-220ENST00000399655 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
CACNA1C-220ENST00000399655 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
CACNA1C-220ENST00000399655 COL4A6Q14031 1691 aa5.57□□□□□ -1.52
CACNA1C-220ENST00000399655 Q6ZPA2 131 aa5.57□□□□□ -1.52
CACNA1C-220ENST00000399655 SPRR4Q96PI1 79 aa5.57□□□□□ -1.52
CACNA1C-220ENST00000399655 FLNAP21333 2647 aaKnown RBP5.56□□□□□ -1.52
CACNA1C-220ENST00000399655 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-220ENST00000399655 COL4A5P29400 1685 aa5.53□□□□□ -1.52
CACNA1C-220ENST00000399655 Q5VV11 94 aa5.52□□□□□ -1.53
CACNA1C-220ENST00000399655 LITAFQ99732 161 aa5.52□□□□□ -1.53
CACNA1C-220ENST00000399655 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
CACNA1C-220ENST00000399655 TEX15Q9BXT5 2789 aa5.51□□□□□ -1.53
CACNA1C-220ENST00000399655 UTP20O75691 2785 aaKnown RBP5.5□□□□□ -1.53
CACNA1C-220ENST00000399655 M0QZ58 72 aa5.5□□□□□ -1.53
CACNA1C-220ENST00000399655 CNBPP62633 177 aaKnown RBP5.48□□□□□ -1.53
CACNA1C-220ENST00000399655 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
CACNA1C-220ENST00000399655 CRIP3Q6Q6R5 217 aa5.47□□□□□ -1.53
CACNA1C-220ENST00000399655 Q6ZR54 194 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms