RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
UBE3A-202ENST00000397954 RPL39P62891 51 aaKnown RBP2.33□□□□□ -2.04
UBE3A-202ENST00000397954 ZC2HC1BQ5TFG8 222 aa2.33□□□□□ -2.04
UBE3A-202ENST00000397954 C6orf48Q9UBA6 75 aa2.33□□□□□ -2.04
UBE3A-202ENST00000397954 TENM2Q9NT68 2774 aa2.33□□□□□ -2.04
UBE3A-202ENST00000397954 HSPG2P98160 4391 aa2.33□□□□□ -2.04
UBE3A-202ENST00000397954 KRTAP16-1A8MUX0 517 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 DPM2O94777 84 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 IFITM1P13164 125 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-202ENST00000397954 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 SPAG11AQ6PDA7 123 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 SLC25A34Q6PIV7 304 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 A0A096LNI7 61 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 BCE1O60756 84 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 PRB4P10163 310 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-202ENST00000397954 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 PPDPFLQ8WWR9 84 aa2.32□□□□□ -2.04
UBE3A-202ENST00000397954 ZNF625Q96I27 306 aaPredicted RBP2.32□□□□□ -2.04
UBE3A-202ENST00000397954 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.31□□□□□ -2.04
UBE3A-202ENST00000397954 M0R378 163 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 TRGC2P03986 189 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 ERG28Q9UKR5 140 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 A0A096LNJ9 63 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 COLCA2A8K830 154 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 SCGB1C2P0DMR2 95 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 ZNF861PO60384 105 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 GAS8-AS1O95177 125 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 IGKCP01834 107 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 COX6A2Q02221 97 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 PMCHL1Q16048 86 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 CLPSL2Q6UWE3 100 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 CAMK2N1Q7Z7J9 78 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 FAM19A2Q8N3H0 131 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
UBE3A-202ENST00000397954 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 SPRR1AP35321 89 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 LINC00313P59037 77 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 HIGD2BQ4VC39 106 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 SPANXDQ9BXN6 97 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 NHP2Q9NX24 153 aaKnown RBP2.3□□□□□ -2.04
UBE3A-202ENST00000397954 UBE2AP49459 152 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
UBE3A-202ENST00000397954 MEIG1Q5JSS6 88 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 PMCHL2Q9BQD1 86 aa2.3□□□□□ -2.04
UBE3A-202ENST00000397954 FAT1Q14517 4588 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 EPPK1P58107 5090 aaKnown RBP2.29□□□□□ -2.04
UBE3A-202ENST00000397954 DLEU1O43261 78 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
UBE3A-202ENST00000397954 FP248Q71RG6 208 aaPredicted RBP2.29□□□□□ -2.04
UBE3A-202ENST00000397954 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 KCNQ1DNQ9H478 68 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 A0A1B0GVX0 72 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 FAM168BA1KXE4 195 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 KRTAP10-8P60410 259 aa2.29□□□□□ -2.04
UBE3A-202ENST00000397954 Q8N9P0 234 aaPredicted RBP2.29□□□□□ -2.04
UBE3A-202ENST00000397954 SYS1-DBNDD2H3BUS1 97 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 RNASE13Q5GAN3 156 aaKnown RBP2.28□□□□□ -2.04
UBE3A-202ENST00000397954 UNQ6190/PRO20217Q6UXQ8 127 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 IGKV3OR2-268A0A0C4DH90 116 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 LECT2O14960 151 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 UBE2BP63146 152 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
UBE3A-202ENST00000397954 A0A1B0GX51 115 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 J3QQQ9 107 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 SCO1O75880 301 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 SPRR1BP22528 89 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 HINT1P49773 126 aaPredicted RBP2.28□□□□□ -2.05
UBE3A-202ENST00000397954 TMEM170BQ5T4T1 132 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 KRTAP7-1Q8IUC3 87 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 DPH3Q96FX2 82 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BKO60814 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BJP06899 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BOP23527 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BBP33778 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BDP58876 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BCP62807 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST2H2BEQ16778 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 OCIAD2Q56VL3 154 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.27□□□□□ -2.05
UBE3A-202ENST00000397954 SSBP3-AS1Q7Z2R9 100 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 OR13C6PQ8NH95 151 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BHQ93079 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BNQ99877 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 HIST1H2BMQ99879 126 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 MIEN1Q9BRT3 115 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 TRAV13-2A0A0B4J235 113 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 SNCGO76070 127 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 FABP4P15090 132 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 Q5XG85 94 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 TMEM126AQ9H061 195 aa2.27□□□□□ -2.05
UBE3A-202ENST00000397954 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
UBE3A-202ENST00000397954 TSTD3H0UI37 97 aa2.26□□□□□ -2.05
UBE3A-202ENST00000397954 IGLV6-57P01721 117 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms