RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PRR4Q16378 134 aa6.14□□□□□ -1.43
CAPN3-206ENST00000397163 C6orf48Q9UBA6 75 aa6.14□□□□□ -1.43
CAPN3-206ENST00000397163 LELP1Q5T871 98 aa6.13□□□□□ -1.43
CAPN3-206ENST00000397163 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
CAPN3-206ENST00000397163 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-206ENST00000397163 C3orf84H3BNL1 204 aa6.12□□□□□ -1.43
CAPN3-206ENST00000397163 ELOF1P60002 83 aaKnown RBP6.12□□□□□ -1.43
CAPN3-206ENST00000397163 FAM30AQ9NZY2 134 aa6.12□□□□□ -1.43
CAPN3-206ENST00000397163 A8MU10 97 aa6.11□□□□□ -1.43
CAPN3-206ENST00000397163 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-206ENST00000397163 HIGD2BQ4VC39 106 aa6.11□□□□□ -1.43
CAPN3-206ENST00000397163 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
CAPN3-206ENST00000397163 NSD1Q96L73 2696 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-206ENST00000397163 Q6ZTC4 211 aa6.1□□□□□ -1.43
CAPN3-206ENST00000397163 CAMK2N2Q96S95 79 aa6.1□□□□□ -1.43
CAPN3-206ENST00000397163 PRR34Q9NV39 138 aa6.1□□□□□ -1.43
CAPN3-206ENST00000397163 VPREB1P12018 145 aa6.09□□□□□ -1.43
CAPN3-206ENST00000397163 APOC4P55056 127 aa6.09□□□□□ -1.43
CAPN3-206ENST00000397163 KRTAP10-3P60369 221 aa6.09□□□□□ -1.43
CAPN3-206ENST00000397163 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
CAPN3-206ENST00000397163 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
CAPN3-206ENST00000397163 M0R378 163 aa6.08□□□□□ -1.44
CAPN3-206ENST00000397163 Q6ZRP5 223 aa6.08□□□□□ -1.44
CAPN3-206ENST00000397163 OCR1Q9BZK8 76 aa6.08□□□□□ -1.44
CAPN3-206ENST00000397163 RETNQ9HD89 108 aa6.08□□□□□ -1.44
CAPN3-206ENST00000397163 Q8NAQ8 132 aa6.07□□□□□ -1.44
CAPN3-206ENST00000397163 SMIM29Q86T20 159 aa6.06□□□□□ -1.44
CAPN3-206ENST00000397163 LINC00528Q8N1L1 170 aa6.06□□□□□ -1.44
CAPN3-206ENST00000397163 EGFEM1PQ0D2K5 195 aa6.06□□□□□ -1.44
CAPN3-206ENST00000397163 Q6ZRU5 148 aa6.06□□□□□ -1.44
CAPN3-206ENST00000397163 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
CAPN3-206ENST00000397163 DEFB105AQ8NG35 78 aa6.06□□□□□ -1.44
CAPN3-206ENST00000397163 ERC2-IT1O76042 136 aa6.04□□□□□ -1.44
CAPN3-206ENST00000397163 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
CAPN3-206ENST00000397163 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
CAPN3-206ENST00000397163 WFDC10BQ8IUB3 73 aa6.04□□□□□ -1.44
CAPN3-206ENST00000397163 ANK3Q12955 4377 aaKnown RBP6.03□□□□□ -1.44
CAPN3-206ENST00000397163 TRAV22A0A0B4J277 110 aa6.02□□□□□ -1.45
CAPN3-206ENST00000397163 A8MUN3 132 aa6.02□□□□□ -1.45
CAPN3-206ENST00000397163 C15orf56Q8N910 161 aa6.01□□□□□ -1.45
CAPN3-206ENST00000397163 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
CAPN3-206ENST00000397163 Q8N377 158 aa6□□□□□ -1.45
CAPN3-206ENST00000397163 KPRPQ5T749 579 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-206ENST00000397163 KRTAP26-1Q6PEX3 210 aa5.99□□□□□ -1.45
CAPN3-206ENST00000397163 ATRQ13535 2644 aa5.99□□□□□ -1.45
CAPN3-206ENST00000397163 IGKV2D-24A0A075B6R9 120 aa5.99□□□□□ -1.45
CAPN3-206ENST00000397163 SYCNQ0VAF6 134 aa5.98□□□□□ -1.45
CAPN3-206ENST00000397163 DEFB116Q30KQ4 102 aa5.98□□□□□ -1.45
CAPN3-206ENST00000397163 ST20-AS1Q8NBB2 130 aa5.98□□□□□ -1.45
CAPN3-206ENST00000397163 SPTSSBQ8NFR3 76 aa5.98□□□□□ -1.45
CAPN3-206ENST00000397163 C7orf33Q8WU49 177 aa5.98□□□□□ -1.45
CAPN3-206ENST00000397163 KCNQ1DNQ9H478 68 aa5.97□□□□□ -1.45
CAPN3-206ENST00000397163 Q1T7F1 81 aa5.97□□□□□ -1.45
CAPN3-206ENST00000397163 SERTAD4-AS1Q5TG53 156 aa5.97□□□□□ -1.45
CAPN3-206ENST00000397163 IGLV5-48A0A075B6I7 105 aa5.97□□□□□ -1.45
CAPN3-206ENST00000397163 VWFP04275 2813 aa5.96□□□□□ -1.45
CAPN3-206ENST00000397163 A0A1W2PNM2 257 aa5.96□□□□□ -1.46
CAPN3-206ENST00000397163 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.46
CAPN3-206ENST00000397163 C1orf137Q5JT78 98 aa5.95□□□□□ -1.46
CAPN3-206ENST00000397163 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-206ENST00000397163 DHRS4-AS1Q9P1J3 65 aa5.95□□□□□ -1.46
CAPN3-206ENST00000397163 ETDCA0A1B0GVM5 59 aa5.94□□□□□ -1.46
CAPN3-206ENST00000397163 K7EQZ3 153 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 PSCAO43653 123 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 KRTAP24-1Q3LI83 254 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 Q6ZRX8 168 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 CHKB-CPT1BH3BT56 60 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 CD164Q04900 197 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 Q8NBF4 154 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 Q9BRP9 147 aa5.93□□□□□ -1.46
CAPN3-206ENST00000397163 A0A0G2JQZ4 141 aa5.92□□□□□ -1.46
CAPN3-206ENST00000397163 A0A1B0GW54 56 aa5.92□□□□□ -1.46
CAPN3-206ENST00000397163 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
CAPN3-206ENST00000397163 H3BNG1 76 aa5.92□□□□□ -1.46
CAPN3-206ENST00000397163 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
CAPN3-206ENST00000397163 COL6A5A8TX70 2615 aa5.92□□□□□ -1.46
CAPN3-206ENST00000397163 Q5VV11 94 aa5.92□□□□□ -1.46
CAPN3-206ENST00000397163 FAM168BA1KXE4 195 aa5.91□□□□□ -1.46
CAPN3-206ENST00000397163 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
CAPN3-206ENST00000397163 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
CAPN3-206ENST00000397163 DSCR10P59022 87 aa5.9□□□□□ -1.46
CAPN3-206ENST00000397163 TNP2Q05952 138 aa5.9□□□□□ -1.46
CAPN3-206ENST00000397163 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
CAPN3-206ENST00000397163 UBE2BP63146 152 aa5.9□□□□□ -1.47
CAPN3-206ENST00000397163 PRR15LQ9BU68 103 aa5.9□□□□□ -1.47
CAPN3-206ENST00000397163 IGLV1-50A0A075B6I6 118 aa5.89□□□□□ -1.47
CAPN3-206ENST00000397163 C16orf90A8MZG2 172 aa5.89□□□□□ -1.47
CAPN3-206ENST00000397163 ZCCHC13Q8WW36 166 aaKnown RBP5.89□□□□□ -1.47
CAPN3-206ENST00000397163 LCE6AA0A183 80 aa5.89□□□□□ -1.47
CAPN3-206ENST00000397163 KRTAP4-16G5E9R7 235 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-206ENST00000397163 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
CAPN3-206ENST00000397163 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
CAPN3-206ENST00000397163 PLA2G2DQ9UNK4 145 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 DEFB131BA0A096LNP1 70 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 TLX1NBP0CAT3 122 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 SPRR1AP35321 89 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 STAB1Q9NY15 2570 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 HCG22E2RYF7 251 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 LINC00208Q96KT6 92 aa5.87□□□□□ -1.47
CAPN3-206ENST00000397163 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms