RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 J3KT08 172 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 BCE1O60756 84 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 LINC01600Q96MT4 127 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 DEFB105AQ8NG35 78 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 C6orf48Q9UBA6 75 aa2.29□□□□□ -2.04
VPS13C-203ENST00000395896 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.28□□□□□ -2.04
VPS13C-203ENST00000395896 KRTAP21-3Q3LHN1 58 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 FAM19A1Q7Z5A9 133 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 Q6ZRX8 168 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 FAM19A5Q7Z5A7 132 aaPredicted RBP2.28□□□□□ -2.04
VPS13C-203ENST00000395896 KCNQ1DNQ9H478 68 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 RETNQ9HD89 108 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 KIAA0087Q14695 138 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 LOC110117498A0A087WWA1 95 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 C1orf137Q5JT78 98 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 C9orf163Q8N9P6 203 aa2.28□□□□□ -2.04
VPS13C-203ENST00000395896 SERP2Q8N6R1 65 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 KRTAP10-3P60369 221 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 IGLV5-52A0A0A0MRZ9 124 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 LY6G6CO95867 125 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
VPS13C-203ENST00000395896 TRBV7-7A0A0K0K1E9 115 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 PRO0461Q9UI25 63 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 H0Y9J4 135 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 KRTAP10-11P60412 298 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 SOSTDC1Q6X4U4 206 aa2.27□□□□□ -2.05
VPS13C-203ENST00000395896 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 VPREB1P12018 145 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 Q6ZRP5 223 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 TRBV7-4A0A0J9YYF1 115 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 TMEM258P61165 79 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 LINC00526Q96FQ7 95 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 PRB2P02812 416 aaPredicted RBP2.26□□□□□ -2.05
VPS13C-203ENST00000395896 LINC00528Q8N1L1 170 aa2.26□□□□□ -2.05
VPS13C-203ENST00000395896 A0A087WYN8 130 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 LINC00167Q96N53 147 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 COX7CP15954 63 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 TP53AIP1Q9HCN2 124 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 IGLV5-37A0A075B6J1 123 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 XGP55808 180 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 Q8NBF4 154 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 LINC00336Q6ZUF6 198 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 SDIM1Q6ZPB5 146 aa2.25□□□□□ -2.05
VPS13C-203ENST00000395896 PRR3P79522 188 aaKnown RBP2.24□□□□□ -2.05
VPS13C-203ENST00000395896 LIMD2Q9BT23 127 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 TRAV7A0A075B6U4 112 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 C15orf56Q8N910 161 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 MT-ATP8P03928 68 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 C5orf47Q569G3 176 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 Q8N3U1 123 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 SLPIP03973 132 aa2.24□□□□□ -2.05
VPS13C-203ENST00000395896 SSBP3-AS1Q7Z2R9 100 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 Q9BRP9 147 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 IGLV5-48A0A075B6I7 105 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 CRYGAP11844 174 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 IGLV1-50A0A075B6I6 118 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 LINC00846Q9NV44 126 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 APLNQ9ULZ1 77 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 SMCPP49901 116 aaPredicted RBP2.23□□□□□ -2.05
VPS13C-203ENST00000395896 Q6ZQT0 140 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 Q6ZVQ6 151 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 C3orf22Q8N5N4 141 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 H3BPC8 53 aa2.23□□□□□ -2.05
VPS13C-203ENST00000395896 FAM104AQ969W3 186 aa2.22□□□□□ -2.05
VPS13C-203ENST00000395896 FBN3Q75N90 2809 aa2.22□□□□□ -2.05
VPS13C-203ENST00000395896 M0R2N4 97 aa2.22□□□□□ -2.05
VPS13C-203ENST00000395896 V9GYY9 64 aa2.22□□□□□ -2.05
VPS13C-203ENST00000395896 LINC01547P58512 204 aaPredicted RBP2.22□□□□□ -2.05
VPS13C-203ENST00000395896 NDUFS5O43920 106 aa2.22□□□□□ -2.05
VPS13C-203ENST00000395896 CDIP1Q9H305 208 aa2.22□□□□□ -2.05
VPS13C-203ENST00000395896 A0A087WTM6 91 aa2.21□□□□□ -2.05
VPS13C-203ENST00000395896 ZNF861PO60384 105 aa2.21□□□□□ -2.05
VPS13C-203ENST00000395896 PRLHP81277 87 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 A0A087WSZ3 146 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 ERC2-IT1O76042 136 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 SMCR5Q8TEV8 140 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 RTL8CO15255 209 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 MOBPQ13875 183 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 SPRR1AP35321 89 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 SPAG11AQ6PDA7 123 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 FAM218AQ96MZ4 157 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 OBSCN-AS1Q96MR7 158 aa2.21□□□□□ -2.06
VPS13C-203ENST00000395896 A0A096LNI7 61 aa2.2□□□□□ -2.06
VPS13C-203ENST00000395896 hDV103S1A0JD37 113 aa2.2□□□□□ -2.06
VPS13C-203ENST00000395896 EPM2AB3EWF7 344 aa2.2□□□□□ -2.06
VPS13C-203ENST00000395896 HCG22E2RYF7 251 aa2.2□□□□□ -2.06
VPS13C-203ENST00000395896 EIF4EBP3O60516 100 aaPredicted RBP2.2□□□□□ -2.06
VPS13C-203ENST00000395896 FAM30AQ9NZY2 134 aa2.2□□□□□ -2.06
VPS13C-203ENST00000395896 LINC00476Q8WZB0 136 aa2.2□□□□□ -2.06
VPS13C-203ENST00000395896 C9orf129Q5T035 196 aaKnown RBP2.19□□□□□ -2.06
VPS13C-203ENST00000395896 IGKV4-1P06312 121 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 SPRR4Q96PI1 79 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 FAM229AH3BQW9 127 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 RPS28P62857 69 aaKnown RBP2.19□□□□□ -2.06
VPS13C-203ENST00000395896 CD164Q04900 197 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 IGLV9-49A0A0B4J1Y8 123 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms