RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
CLIP2-203ENST00000395060 VPREB1P12018 145 aa9.48□□□□□ -0.89
CLIP2-203ENST00000395060 PDE6GP18545 87 aa9.48□□□□□ -0.89
CLIP2-203ENST00000395060 RETNQ9HD89 108 aa9.48□□□□□ -0.89
CLIP2-203ENST00000395060 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
CLIP2-203ENST00000395060 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
CLIP2-203ENST00000395060 MAST4O15021 2626 aa9.47□□□□□ -0.89
CLIP2-203ENST00000395060 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
CLIP2-203ENST00000395060 SPART-AS1P0CW21 52 aa9.47□□□□□ -0.89
CLIP2-203ENST00000395060 WIPF1O43516 503 aa9.46□□□□□ -0.89
CLIP2-203ENST00000395060 Q8NAQ8 132 aa9.46□□□□□ -0.89
CLIP2-203ENST00000395060 NOTCH1P46531 2555 aa9.46□□□□□ -0.9
CLIP2-203ENST00000395060 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.9
CLIP2-203ENST00000395060 NBEAL1Q6ZS30 2694 aa9.46□□□□□ -0.9
CLIP2-203ENST00000395060 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
CLIP2-203ENST00000395060 PRR4Q16378 134 aa9.45□□□□□ -0.9
CLIP2-203ENST00000395060 IGKV4-1P06312 121 aa9.45□□□□□ -0.9
CLIP2-203ENST00000395060 Q6ZRP5 223 aa9.45□□□□□ -0.9
CLIP2-203ENST00000395060 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
CLIP2-203ENST00000395060 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
CLIP2-203ENST00000395060 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
CLIP2-203ENST00000395060 APOC4P55056 127 aa9.43□□□□□ -0.9
CLIP2-203ENST00000395060 M0R378 163 aa9.42□□□□□ -0.9
CLIP2-203ENST00000395060 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
CLIP2-203ENST00000395060 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
CLIP2-203ENST00000395060 FBN1P35555 2871 aaKnown RBP9.41□□□□□ -0.9
CLIP2-203ENST00000395060 SERTAD4-AS1Q5TG53 156 aa9.41□□□□□ -0.9
CLIP2-203ENST00000395060 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
CLIP2-203ENST00000395060 PRYO14603 147 aa9.4□□□□□ -0.9
CLIP2-203ENST00000395060 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
CLIP2-203ENST00000395060 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLIP2-203ENST00000395060 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.9
CLIP2-203ENST00000395060 EPM2AB3EWF7 344 aa9.4□□□□□ -0.91
CLIP2-203ENST00000395060 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.91
CLIP2-203ENST00000395060 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.91
CLIP2-203ENST00000395060 FAM168BA1KXE4 195 aa9.39□□□□□ -0.91
CLIP2-203ENST00000395060 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
CLIP2-203ENST00000395060 BCE1O60756 84 aa9.38□□□□□ -0.91
CLIP2-203ENST00000395060 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
CLIP2-203ENST00000395060 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
CLIP2-203ENST00000395060 Q6ZTC4 211 aa9.38□□□□□ -0.91
CLIP2-203ENST00000395060 Q8N377 158 aa9.38□□□□□ -0.91
CLIP2-203ENST00000395060 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
CLIP2-203ENST00000395060 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
CLIP2-203ENST00000395060 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
CLIP2-203ENST00000395060 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
CLIP2-203ENST00000395060 NDUFC1O43677 76 aa9.36□□□□□ -0.91
CLIP2-203ENST00000395060 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
CLIP2-203ENST00000395060 SRRM2Q9UQ35 2752 aaKnown RBP9.34□□□□□ -0.91
CLIP2-203ENST00000395060 ESRGQ1W209 222 aa9.34□□□□□ -0.91
CLIP2-203ENST00000395060 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
CLIP2-203ENST00000395060 H3BQ85 93 aa9.33□□□□□ -0.92
CLIP2-203ENST00000395060 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
CLIP2-203ENST00000395060 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
CLIP2-203ENST00000395060 ANK2Q01484 3957 aa9.31□□□□□ -0.92
CLIP2-203ENST00000395060 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
CLIP2-203ENST00000395060 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
CLIP2-203ENST00000395060 CASC10Q5T4H9 136 aa9.3□□□□□ -0.92
CLIP2-203ENST00000395060 K7EQZ3 153 aa9.29□□□□□ -0.92
CLIP2-203ENST00000395060 Q9BRP9 147 aa9.29□□□□□ -0.92
CLIP2-203ENST00000395060 ETDCA0A1B0GVM5 59 aa9.29□□□□□ -0.92
CLIP2-203ENST00000395060 UBE2BP63146 152 aa9.29□□□□□ -0.92
CLIP2-203ENST00000395060 PSPHP1O15172 72 aa9.28□□□□□ -0.92
CLIP2-203ENST00000395060 WFDC13Q8IUB5 93 aa9.27□□□□□ -0.93
CLIP2-203ENST00000395060 MGAM2Q2M2H8 2515 aa9.26□□□□□ -0.93
CLIP2-203ENST00000395060 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
CLIP2-203ENST00000395060 KRTAP10-11P60412 298 aa9.25□□□□□ -0.93
CLIP2-203ENST00000395060 F8WDY8 70 aa9.24□□□□□ -0.93
CLIP2-203ENST00000395060 KCNQ1DNQ9H478 68 aa9.24□□□□□ -0.93
CLIP2-203ENST00000395060 SEC61GP60059 68 aa9.24□□□□□ -0.93
CLIP2-203ENST00000395060 Q6ZRX8 168 aa9.23□□□□□ -0.93
CLIP2-203ENST00000395060 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
CLIP2-203ENST00000395060 DSCR10P59022 87 aa9.22□□□□□ -0.93
CLIP2-203ENST00000395060 RPL37AP61513 92 aaKnown RBP9.22□□□□□ -0.93
CLIP2-203ENST00000395060 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.93
CLIP2-203ENST00000395060 C1orf195Q5TG92 126 aa9.21□□□□□ -0.93
CLIP2-203ENST00000395060 IGLV5-48A0A075B6I7 105 aa9.21□□□□□ -0.94
CLIP2-203ENST00000395060 KRTAP24-1Q3LI83 254 aa9.21□□□□□ -0.94
CLIP2-203ENST00000395060 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
CLIP2-203ENST00000395060 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
CLIP2-203ENST00000395060 Q8NBF4 154 aa9.2□□□□□ -0.94
CLIP2-203ENST00000395060 PRLHP81277 87 aa9.19□□□□□ -0.94
CLIP2-203ENST00000395060 A0A096LNI7 61 aa9.18□□□□□ -0.94
CLIP2-203ENST00000395060 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
CLIP2-203ENST00000395060 DHRS4-AS1Q9P1J3 65 aa9.18□□□□□ -0.94
CLIP2-203ENST00000395060 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
CLIP2-203ENST00000395060 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
CLIP2-203ENST00000395060 PSCAO43653 123 aa9.17□□□□□ -0.94
CLIP2-203ENST00000395060 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
CLIP2-203ENST00000395060 A0A087WSZ3 146 aa9.16□□□□□ -0.94
CLIP2-203ENST00000395060 LINC00476Q8WZB0 136 aa9.16□□□□□ -0.94
CLIP2-203ENST00000395060 A8MU10 97 aa9.14□□□□□ -0.95
CLIP2-203ENST00000395060 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
CLIP2-203ENST00000395060 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
CLIP2-203ENST00000395060 LINC01556Q5JQF7 62 aa9.14□□□□□ -0.95
CLIP2-203ENST00000395060 LINC00208Q96KT6 92 aa9.14□□□□□ -0.95
CLIP2-203ENST00000395060 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
CLIP2-203ENST00000395060 TNP2Q05952 138 aa9.12□□□□□ -0.95
CLIP2-203ENST00000395060 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
CLIP2-203ENST00000395060 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms