RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BKO60814 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 IGLV6-57P01721 117 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 IGKCP01834 107 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BJP06899 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BOP23527 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BBP33778 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BDP58876 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 LITAFQ99732 161 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 HSPB8Q9UJY1 196 aa5.03□□□□□ -1.6
ATG4A-205ENST00000394892 IGLV7-46A0A075B6I9 117 aa5.02□□□□□ -1.61
ATG4A-205ENST00000394892 A0A0J9YXY3 114 aa5.02□□□□□ -1.61
ATG4A-205ENST00000394892 TRBV10-2A0A0K0K1G8 114 aa5.02□□□□□ -1.61
ATG4A-205ENST00000394892 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
ATG4A-205ENST00000394892 Q8NBF4 154 aa5.02□□□□□ -1.61
ATG4A-205ENST00000394892 ETDCA0A1B0GVM5 59 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 LINC00587B1AMM8 73 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 E9PLD3 99 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 DDTP30046 118 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 NMUP48645 174 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 NPC2P61916 151 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 TTTY13Q9BZ97 58 aa5.01□□□□□ -1.61
ATG4A-205ENST00000394892 SYS1-DBNDD2H3BUS1 97 aa5□□□□□ -1.61
ATG4A-205ENST00000394892 LGALS3P17931 250 aaKnown RBP5□□□□□ -1.61
ATG4A-205ENST00000394892 LINC01545Q5VT33 79 aa5□□□□□ -1.61
ATG4A-205ENST00000394892 GAGE2AQ6NT46 116 aa5□□□□□ -1.61
ATG4A-205ENST00000394892 MAP1LC3CQ9BXW4 147 aa5□□□□□ -1.61
ATG4A-205ENST00000394892 SPANXB1Q9NS25 103 aaPredicted RBP5□□□□□ -1.61
ATG4A-205ENST00000394892 NDUFC2O95298 119 aa4.99□□□□□ -1.61
ATG4A-205ENST00000394892 Q6ZRX8 168 aa4.99□□□□□ -1.61
ATG4A-205ENST00000394892 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
ATG4A-205ENST00000394892 ZNF706Q9Y5V0 76 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-205ENST00000394892 HERVK_113P61574 105 aa4.98□□□□□ -1.61
ATG4A-205ENST00000394892 KRTAP13-3Q3SY46 172 aa4.98□□□□□ -1.61
ATG4A-205ENST00000394892 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
ATG4A-205ENST00000394892 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
ATG4A-205ENST00000394892 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
ATG4A-205ENST00000394892 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-205ENST00000394892 MOBPQ13875 183 aa4.97□□□□□ -1.61
ATG4A-205ENST00000394892 LINC00308Q8TCZ7 52 aa4.97□□□□□ -1.61
ATG4A-205ENST00000394892 TRAV23DV6A0A075B6W5 121 aa4.96□□□□□ -1.62
ATG4A-205ENST00000394892 IGLV9-49A0A0B4J1Y8 123 aa4.96□□□□□ -1.62
ATG4A-205ENST00000394892 ZNF73O43830 326 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-205ENST00000394892 COA6Q5JTJ3 125 aaKnown RBP4.96□□□□□ -1.62
ATG4A-205ENST00000394892 FP248Q71RG6 208 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-205ENST00000394892 Q8N377 158 aa4.95□□□□□ -1.62
ATG4A-205ENST00000394892 TIMM17BO60830 172 aa4.94□□□□□ -1.62
ATG4A-205ENST00000394892 SPINK1P00995 79 aa4.94□□□□□ -1.62
ATG4A-205ENST00000394892 S100A7L2Q5SY68 101 aa4.94□□□□□ -1.62
ATG4A-205ENST00000394892 SSBP3-AS1Q7Z2R9 100 aa4.94□□□□□ -1.62
ATG4A-205ENST00000394892 MIEN1Q9BRT3 115 aa4.94□□□□□ -1.62
ATG4A-205ENST00000394892 ZNF815PA8K554 130 aa4.93□□□□□ -1.62
ATG4A-205ENST00000394892 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
ATG4A-205ENST00000394892 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
ATG4A-205ENST00000394892 SPRR1BP22528 89 aa4.92□□□□□ -1.62
ATG4A-205ENST00000394892 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
ATG4A-205ENST00000394892 SPANXCQ9NY87 97 aa4.92□□□□□ -1.62
ATG4A-205ENST00000394892 KRTDAPP60985 99 aa4.91□□□□□ -1.62
ATG4A-205ENST00000394892 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
ATG4A-205ENST00000394892 ATOH7Q8N100 152 aa4.91□□□□□ -1.62
ATG4A-205ENST00000394892 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
ATG4A-205ENST00000394892 ASB16-AS1Q495Z4 193 aa4.9□□□□□ -1.63
ATG4A-205ENST00000394892 PCP2Q8IVA1 136 aa4.9□□□□□ -1.63
ATG4A-205ENST00000394892 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
ATG4A-205ENST00000394892 SPANXDQ9BXN6 97 aa4.9□□□□□ -1.63
ATG4A-205ENST00000394892 ELOF1P60002 83 aaKnown RBP4.89□□□□□ -1.63
ATG4A-205ENST00000394892 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-205ENST00000394892 C6orf99Q4VX62 202 aa4.89□□□□□ -1.63
ATG4A-205ENST00000394892 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
ATG4A-205ENST00000394892 C5orf52A6NGY3 159 aa4.88□□□□□ -1.63
ATG4A-205ENST00000394892 C9orf153Q5TBE3 101 aa4.88□□□□□ -1.63
ATG4A-205ENST00000394892 SMIM29Q86T20 159 aa4.88□□□□□ -1.63
ATG4A-205ENST00000394892 LINC00518Q8N0U6 118 aa4.88□□□□□ -1.63
ATG4A-205ENST00000394892 A0A0G2JQZ4 141 aa4.87□□□□□ -1.63
ATG4A-205ENST00000394892 SLC25A20O43772 301 aa4.87□□□□□ -1.63
ATG4A-205ENST00000394892 COX7BP24311 80 aa4.87□□□□□ -1.63
ATG4A-205ENST00000394892 MUSTN1Q8IVN3 82 aa4.87□□□□□ -1.63
ATG4A-205ENST00000394892 HRCT1Q6UXD1 115 aa4.86□□□□□ -1.63
ATG4A-205ENST00000394892 DHRS4-AS1Q9P1J3 65 aa4.86□□□□□ -1.63
ATG4A-205ENST00000394892 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
ATG4A-205ENST00000394892 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
ATG4A-205ENST00000394892 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 IFITM1P13164 125 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 HINT1P49773 126 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-205ENST00000394892 Q1RN00 199 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 SCGB1D4Q6XE38 83 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 HIST3H2BBQ8N257 126 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 DEFB105AQ8NG35 78 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 HIST1H2BLQ99880 126 aa4.84□□□□□ -1.63
ATG4A-205ENST00000394892 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
ATG4A-205ENST00000394892 TRBV7-6A0A0J9YX20 115 aa4.83□□□□□ -1.64
ATG4A-205ENST00000394892 SMIM11BQ8TCY0 68 aa4.83□□□□□ -1.64
ATG4A-205ENST00000394892 C20orf202A1L168 122 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms