RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 A8MUN3 132 aa5□□□□□ -1.61
SYNE2-205ENST00000394768 A0A1W2PPR1 153 aa4.99□□□□□ -1.61
SYNE2-205ENST00000394768 IGLV1-50A0A075B6I6 118 aa4.99□□□□□ -1.61
SYNE2-205ENST00000394768 MAST4O15021 2626 aa4.99□□□□□ -1.61
SYNE2-205ENST00000394768 TM2D3Q9BRN9 247 aa4.99□□□□□ -1.61
SYNE2-205ENST00000394768 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
SYNE2-205ENST00000394768 PLA2G2DQ9UNK4 145 aa4.99□□□□□ -1.61
SYNE2-205ENST00000394768 K7EQZ3 153 aa4.98□□□□□ -1.61
SYNE2-205ENST00000394768 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
SYNE2-205ENST00000394768 HRES1P13985 223 aa4.98□□□□□ -1.61
SYNE2-205ENST00000394768 HECTD1Q9ULT8 2610 aa4.98□□□□□ -1.61
SYNE2-205ENST00000394768 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
SYNE2-205ENST00000394768 TLX1NBP0CAT3 122 aa4.97□□□□□ -1.61
SYNE2-205ENST00000394768 C10orf142B7Z368 130 aa4.97□□□□□ -1.61
SYNE2-205ENST00000394768 BPTFQ12830 3046 aa4.96□□□□□ -1.62
SYNE2-205ENST00000394768 ATRQ13535 2644 aa4.96□□□□□ -1.62
SYNE2-205ENST00000394768 Q6ZSA8 131 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 DSCR10P59022 87 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 FAM218AQ96MZ4 157 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 CD164Q04900 197 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 KLKP1Q107X0 134 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 IGFL1Q6UW32 110 aa4.95□□□□□ -1.62
SYNE2-205ENST00000394768 FAM104AQ969W3 186 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 IGLV7-43P04211 117 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 A0A087WTM6 91 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 LINC00528Q8N1L1 170 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 C9orf92A6NGG3 77 aa4.94□□□□□ -1.62
SYNE2-205ENST00000394768 PRR34Q9NV39 138 aa4.93□□□□□ -1.62
SYNE2-205ENST00000394768 CNBPP62633 177 aaKnown RBP4.93□□□□□ -1.62
SYNE2-205ENST00000394768 CSNK1G2-AS1Q8NCQ2 148 aa4.93□□□□□ -1.62
SYNE2-205ENST00000394768 M0R2T5 61 aa4.93□□□□□ -1.62
SYNE2-205ENST00000394768 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
SYNE2-205ENST00000394768 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
SYNE2-205ENST00000394768 STAB1Q9NY15 2570 aa4.92□□□□□ -1.62
SYNE2-205ENST00000394768 FAM168BA1KXE4 195 aa4.92□□□□□ -1.62
SYNE2-205ENST00000394768 PRRC2CQ9Y520 2896 aaKnown RBP4.92□□□□□ -1.62
SYNE2-205ENST00000394768 KLK9Q2XQG4 91 aa4.91□□□□□ -1.62
SYNE2-205ENST00000394768 Q1T7F1 81 aa4.91□□□□□ -1.62
SYNE2-205ENST00000394768 K7EIL1 84 aa4.89□□□□□ -1.63
SYNE2-205ENST00000394768 LCA10Q71F78 164 aa4.89□□□□□ -1.63
SYNE2-205ENST00000394768 IGLV5-48A0A075B6I7 105 aa4.89□□□□□ -1.63
SYNE2-205ENST00000394768 SPRR4Q96PI1 79 aa4.88□□□□□ -1.63
SYNE2-205ENST00000394768 CFAP46Q8IYW2 2715 aa4.88□□□□□ -1.63
SYNE2-205ENST00000394768 C19orf73Q9NVV2 129 aa4.88□□□□□ -1.63
SYNE2-205ENST00000394768 PRO0461Q9UI25 63 aa4.88□□□□□ -1.63
SYNE2-205ENST00000394768 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
SYNE2-205ENST00000394768 FAM229BQ4G0N7 80 aa4.86□□□□□ -1.63
SYNE2-205ENST00000394768 SMCPP49901 116 aaPredicted RBP4.86□□□□□ -1.63
SYNE2-205ENST00000394768 A0A0D9SG42 100 aa4.86□□□□□ -1.63
SYNE2-205ENST00000394768 ZNF575Q86XF7 245 aa4.85□□□□□ -1.63
SYNE2-205ENST00000394768 HELZ2Q9BYK8 2649 aaKnown RBP4.85□□□□□ -1.63
SYNE2-205ENST00000394768 NBEAL1Q6ZS30 2694 aa4.85□□□□□ -1.63
SYNE2-205ENST00000394768 Q8N377 158 aa4.85□□□□□ -1.63
SYNE2-205ENST00000394768 LITAFQ99732 161 aa4.84□□□□□ -1.63
SYNE2-205ENST00000394768 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
SYNE2-205ENST00000394768 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
SYNE2-205ENST00000394768 CSAG1Q6PB30 78 aa4.84□□□□□ -1.64
SYNE2-205ENST00000394768 SMR3BP02814 79 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-205ENST00000394768 KRTAP10-11P60412 298 aa4.82□□□□□ -1.64
SYNE2-205ENST00000394768 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
SYNE2-205ENST00000394768 LINC00612Q8N6U2 182 aa4.82□□□□□ -1.64
SYNE2-205ENST00000394768 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
SYNE2-205ENST00000394768 TNP2Q05952 138 aa4.81□□□□□ -1.64
SYNE2-205ENST00000394768 A0A1B0GU33 70 aa4.81□□□□□ -1.64
SYNE2-205ENST00000394768 ITPR3Q14573 2671 aa4.8□□□□□ -1.64
SYNE2-205ENST00000394768 H7BZZ5 65 aa4.8□□□□□ -1.64
SYNE2-205ENST00000394768 Q8N1X5 172 aa4.79□□□□□ -1.64
SYNE2-205ENST00000394768 DMBT1Q9UGM3 2413 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-205ENST00000394768 S4R3F8 94 aa4.79□□□□□ -1.64
SYNE2-205ENST00000394768 AKAP13Q12802 2813 aa4.77□□□□□ -1.65
SYNE2-205ENST00000394768 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
SYNE2-205ENST00000394768 R4GN34 69 aa4.76□□□□□ -1.65
SYNE2-205ENST00000394768 CENPEQ02224 2701 aa4.75□□□□□ -1.65
SYNE2-205ENST00000394768 CENPFP49454 3210 aa4.75□□□□□ -1.65
SYNE2-205ENST00000394768 CASC10Q5T4H9 136 aa4.74□□□□□ -1.65
SYNE2-205ENST00000394768 Q75L30 129 aa4.72□□□□□ -1.65
SYNE2-205ENST00000394768 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
SYNE2-205ENST00000394768 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
SYNE2-205ENST00000394768 PLAC4Q8WY50 150 aa4.72□□□□□ -1.65
SYNE2-205ENST00000394768 ANAPC11Q9NYG5 84 aa4.71□□□□□ -1.66
SYNE2-205ENST00000394768 GIG44P09565 113 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-205ENST00000394768 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-205ENST00000394768 KMT2BQ9UMN6 2715 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-205ENST00000394768 A0A1W2PNM2 257 aa4.69□□□□□ -1.66
SYNE2-205ENST00000394768 OXTP01178 125 aa4.68□□□□□ -1.66
SYNE2-205ENST00000394768 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
SYNE2-205ENST00000394768 UNC79Q9P2D8 2635 aa4.68□□□□□ -1.66
SYNE2-205ENST00000394768 A0A096LNT2 108 aa4.67□□□□□ -1.66
SYNE2-205ENST00000394768 FP248Q71RG6 208 aaPredicted RBP4.67□□□□□ -1.66
SYNE2-205ENST00000394768 OCR1Q9BZK8 76 aa4.67□□□□□ -1.66
SYNE2-205ENST00000394768 TEX15Q9BXT5 2789 aa4.67□□□□□ -1.66
SYNE2-205ENST00000394768 STAB2Q8WWQ8 2551 aa4.66□□□□□ -1.66
SYNE2-205ENST00000394768 WIPF1O43516 503 aa4.65□□□□□ -1.67
SYNE2-205ENST00000394768 SPINK7P58062 85 aa4.64□□□□□ -1.67
SYNE2-205ENST00000394768 NOTCH1P46531 2555 aa4.63□□□□□ -1.67
SYNE2-205ENST00000394768 SETXQ7Z333 2677 aaKnown RBP4.63□□□□□ -1.67
SYNE2-205ENST00000394768 RPL37P61927 97 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms