RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZFHX3Q15911 3703 aa3.89□□□□□ -1.79
RFFL-202ENST00000394597 ERC2-IT1O76042 136 aa3.89□□□□□ -1.79
RFFL-202ENST00000394597 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
RFFL-202ENST00000394597 A0A096LNI7 61 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 C6orf223Q8N319 242 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 B9D2Q9BPU9 175 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 TEP1Q99973 2627 aaKnown RBP3.88□□□□□ -1.79
RFFL-202ENST00000394597 H3BNG1 76 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 TRAV22A0A0B4J277 110 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
RFFL-202ENST00000394597 SYCNQ0VAF6 134 aa3.87□□□□□ -1.79
RFFL-202ENST00000394597 NUPR2A6NF83 97 aa3.87□□□□□ -1.79
RFFL-202ENST00000394597 UNQ6190/PRO20217Q6UXQ8 127 aa3.87□□□□□ -1.79
RFFL-202ENST00000394597 EGFEM1PQ0D2K5 195 aa3.87□□□□□ -1.79
RFFL-202ENST00000394597 OBSCN-AS1Q96MR7 158 aa3.87□□□□□ -1.79
RFFL-202ENST00000394597 LAMA5O15230 3695 aa3.87□□□□□ -1.79
RFFL-202ENST00000394597 HRNRQ86YZ3 2850 aaPredicted RBP3.87□□□□□ -1.79
RFFL-202ENST00000394597 UBR5O95071 2799 aaPredicted RBP3.87□□□□□ -1.79
RFFL-202ENST00000394597 CYSRT1A8MQ03 144 aa3.86□□□□□ -1.79
RFFL-202ENST00000394597 FAM229BQ4G0N7 80 aa3.86□□□□□ -1.79
RFFL-202ENST00000394597 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
RFFL-202ENST00000394597 H0Y9J4 135 aa3.86□□□□□ -1.79
RFFL-202ENST00000394597 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
RFFL-202ENST00000394597 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.86□□□□□ -1.79
RFFL-202ENST00000394597 M0R2N4 97 aa3.86□□□□□ -1.79
RFFL-202ENST00000394597 LCE2DQ5TA82 110 aaPredicted RBP3.86□□□□□ -1.79
RFFL-202ENST00000394597 APCP25054 2843 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 TRBV7-4A0A0J9YYF1 115 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 SERTAD4-AS1Q5TG53 156 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 K7EIL1 84 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 ITPR2Q14571 2701 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
RFFL-202ENST00000394597 hDV103S1A0JD37 113 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 M0R378 163 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 C1orf137Q5JT78 98 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 TACC2O95359 2948 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 IGKV4-1P06312 121 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 C10orf25Q5T742 122 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 C22orf24Q9Y442 160 aa3.84□□□□□ -1.79
RFFL-202ENST00000394597 ATP11AUNQ6ZP68 121 aa3.83□□□□□ -1.8
RFFL-202ENST00000394597 H0Y9P7 68 aa3.83□□□□□ -1.8
RFFL-202ENST00000394597 Q6ZRU5 148 aa3.83□□□□□ -1.8
RFFL-202ENST00000394597 Q1T7F1 81 aa3.82□□□□□ -1.8
RFFL-202ENST00000394597 GCN1Q92616 2671 aaKnown RBP3.82□□□□□ -1.8
RFFL-202ENST00000394597 RELNP78509 3460 aa3.82□□□□□ -1.8
RFFL-202ENST00000394597 NOTCH1P46531 2555 aa3.82□□□□□ -1.8
RFFL-202ENST00000394597 PCOTHQ58A44 107 aa3.82□□□□□ -1.8
RFFL-202ENST00000394597 C7orf65Q6ZTY9 151 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 MDFIQ99750 246 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 CYP4F30PQ9H0H9 118 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 LY6G6CO95867 125 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 SPAG11AQ6PDA7 123 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 VPREB1P12018 145 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 LCA10Q71F78 164 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
RFFL-202ENST00000394597 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
RFFL-202ENST00000394597 Q6ZRP5 223 aa3.8□□□□□ -1.8
RFFL-202ENST00000394597 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
RFFL-202ENST00000394597 LINC00588Q9Y4M8 146 aa3.8□□□□□ -1.8
RFFL-202ENST00000394597 CELSR2Q9HCU4 2923 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 CRYBG3Q68DQ2 2970 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 ZANQ9Y493 2812 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 H3BS24 57 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
RFFL-202ENST00000394597 DCHS2Q6V1P9 2916 aa3.78□□□□□ -1.8
RFFL-202ENST00000394597 DNAH10OSP0CZ25 163 aa3.78□□□□□ -1.8
RFFL-202ENST00000394597 ELOF1P60002 83 aaKnown RBP3.78□□□□□ -1.8
RFFL-202ENST00000394597 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.81
RFFL-202ENST00000394597 HIVEP1P15822 2718 aa3.77□□□□□ -1.81
RFFL-202ENST00000394597 COL6A5A8TX70 2615 aa3.77□□□□□ -1.81
RFFL-202ENST00000394597 A0A087WSZ3 146 aa3.77□□□□□ -1.81
RFFL-202ENST00000394597 VPS13CQ709C8 3753 aa3.77□□□□□ -1.81
RFFL-202ENST00000394597 PRR34Q9NV39 138 aa3.77□□□□□ -1.81
RFFL-202ENST00000394597 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
RFFL-202ENST00000394597 K7EQZ3 153 aa3.76□□□□□ -1.81
RFFL-202ENST00000394597 KMT2BQ9UMN6 2715 aaPredicted RBP3.76□□□□□ -1.81
RFFL-202ENST00000394597 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
RFFL-202ENST00000394597 SPINK6Q6UWN8 80 aa3.76□□□□□ -1.81
RFFL-202ENST00000394597 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
RFFL-202ENST00000394597 COA5Q86WW8 74 aa3.75□□□□□ -1.81
RFFL-202ENST00000394597 C1orf134Q5TEV5 83 aa3.75□□□□□ -1.81
RFFL-202ENST00000394597 Q8NBF4 154 aa3.75□□□□□ -1.81
RFFL-202ENST00000394597 A0A1B0GW54 56 aa3.75□□□□□ -1.81
RFFL-202ENST00000394597 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
RFFL-202ENST00000394597 NBEAL1Q6ZS30 2694 aa3.74□□□□□ -1.81
RFFL-202ENST00000394597 GVQW2A0A096LPI5 108 aaPredicted RBP3.74□□□□□ -1.81
RFFL-202ENST00000394597 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
RFFL-202ENST00000394597 H3BPC8 53 aa3.74□□□□□ -1.81
RFFL-202ENST00000394597 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
RFFL-202ENST00000394597 NBDYA0A0U1RRE5 68 aa3.74□□□□□ -1.81
RFFL-202ENST00000394597 FBN2P35556 2912 aa3.73□□□□□ -1.81
RFFL-202ENST00000394597 NSD1Q96L73 2696 aaPredicted RBP3.73□□□□□ -1.81
RFFL-202ENST00000394597 RETNLBQ9BQ08 111 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms