RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 C7orf33Q8WU49 177 aa14.69□□□□□ -0.06
CNN3-202ENST00000394202 DNAH8Q96JB1 4490 aa14.69□□□□□ -0.06
CNN3-202ENST00000394202 TRBV10-3A0A0K0K1G6 114 aa14.69□□□□□ -0.06
CNN3-202ENST00000394202 A0A087WYN8 130 aa14.68□□□□□ -0.06
CNN3-202ENST00000394202 SLC25A20O43772 301 aa14.67□□□□□ -0.06
CNN3-202ENST00000394202 IGLV6-57P01721 117 aa14.67□□□□□ -0.06
CNN3-202ENST00000394202 SCGB1A1P11684 91 aa14.67□□□□□ -0.06
CNN3-202ENST00000394202 S100A7L2Q5SY68 101 aa14.67□□□□□ -0.06
CNN3-202ENST00000394202 TRIAP1O43715 76 aa14.67□□□□□ -0.06
CNN3-202ENST00000394202 LINC01600Q96MT4 127 aa14.67□□□□□ -0.06
CNN3-202ENST00000394202 LRP1BQ9NZR2 4599 aa14.66□□□□□ -0.06
CNN3-202ENST00000394202 C9JAW5 83 aa14.65□□□□□ -0.06
CNN3-202ENST00000394202 MRPL55Q7Z7F7 128 aaKnown RBP14.65□□□□□ -0.06
CNN3-202ENST00000394202 LINC00167Q96N53 147 aa14.65□□□□□ -0.06
CNN3-202ENST00000394202 TMEM126AQ9H061 195 aa14.65□□□□□ -0.06
CNN3-202ENST00000394202 RPL37AP8A6NKH3 93 aa14.65□□□□□ -0.06
CNN3-202ENST00000394202 COX6CP09669 75 aa14.65□□□□□ -0.06
CNN3-202ENST00000394202 PHF5AQ7RTV0 110 aaKnown RBP14.64□□□□□ -0.07
CNN3-202ENST00000394202 ANKRD29Q8N6D5 301 aa14.64□□□□□ -0.07
CNN3-202ENST00000394202 SMIM11BQ8TCY0 68 aa14.64□□□□□ -0.07
CNN3-202ENST00000394202 DYNC1H1Q14204 4646 aaKnown RBP14.63□□□□□ -0.07
CNN3-202ENST00000394202 EPM2AB3EWF7 344 aa14.62□□□□□ -0.07
CNN3-202ENST00000394202 Q6ZSA8 131 aa14.62□□□□□ -0.07
CNN3-202ENST00000394202 HAMPP81172 84 aa14.61□□□□□ -0.07
CNN3-202ENST00000394202 KRTAP11-1Q8IUC1 163 aa14.6□□□□□ -0.07
CNN3-202ENST00000394202 PLAC8Q9NZF1 115 aa14.6□□□□□ -0.07
CNN3-202ENST00000394202 IGLV1-50A0A075B6I6 118 aa14.59□□□□□ -0.07
CNN3-202ENST00000394202 CDIP1Q9H305 208 aa14.58□□□□□ -0.07
CNN3-202ENST00000394202 RPL28P46779 137 aaKnown RBP14.57□□□□□ -0.08
CNN3-202ENST00000394202 CIRBP-AS1Q8TBR5 109 aa14.57□□□□□ -0.08
CNN3-202ENST00000394202 TRAV23DV6A0A075B6W5 121 aa14.56□□□□□ -0.08
CNN3-202ENST00000394202 SCXQ7RTU7 201 aa14.55□□□□□ -0.08
CNN3-202ENST00000394202 LST1O00453 97 aa14.54□□□□□ -0.08
CNN3-202ENST00000394202 KCNQ1DNQ9H478 68 aa14.54□□□□□ -0.08
CNN3-202ENST00000394202 C6orf99Q4VX62 202 aa14.54□□□□□ -0.08
CNN3-202ENST00000394202 H3BT86 120 aa14.53□□□□□ -0.08
CNN3-202ENST00000394202 ZNF73O43830 326 aaPredicted RBP14.52□□□□□ -0.09
CNN3-202ENST00000394202 UBE2BP63146 152 aa14.51□□□□□ -0.09
CNN3-202ENST00000394202 CLEC2BQ92478 149 aa14.5□□□□□ -0.09
CNN3-202ENST00000394202 PRYO14603 147 aa14.46□□□□□ -0.09
CNN3-202ENST00000394202 DIRC1Q969H9 104 aa14.46□□□□□ -0.09
CNN3-202ENST00000394202 KRTAP4-16G5E9R7 235 aaPredicted RBP14.45□□□□□ -0.1
CNN3-202ENST00000394202 SPRR1AP35321 89 aa14.45□□□□□ -0.1
CNN3-202ENST00000394202 FAM218AQ96MZ4 157 aa14.45□□□□□ -0.1
CNN3-202ENST00000394202 XGP55808 180 aa14.45□□□□□ -0.1
CNN3-202ENST00000394202 REG3GQ6UW15 175 aa14.45□□□□□ -0.1
CNN3-202ENST00000394202 APOBP04114 4563 aaKnown RBP14.45□□□□□ -0.1
CNN3-202ENST00000394202 TEX49A0A1B0GTD5 131 aa14.43□□□□□ -0.1
CNN3-202ENST00000394202 MT-ATP8P03928 68 aa14.42□□□□□ -0.1
CNN3-202ENST00000394202 EPPK1P58107 5090 aaKnown RBP14.41□□□□□ -0.1
CNN3-202ENST00000394202 ELOF1P60002 83 aaKnown RBP14.4□□□□□ -0.1
CNN3-202ENST00000394202 COX7BP24311 80 aa14.39□□□□□ -0.11
CNN3-202ENST00000394202 PSORS1C2Q9UIG4 136 aa14.39□□□□□ -0.11
CNN3-202ENST00000394202 B5MCH6 92 aa14.38□□□□□ -0.11
CNN3-202ENST00000394202 H0YGX0 51 aa14.38□□□□□ -0.11
CNN3-202ENST00000394202 SRRM2Q9UQ35 2752 aaKnown RBP14.38□□□□□ -0.11
CNN3-202ENST00000394202 TRACP01848 142 aa14.38□□□□□ -0.11
CNN3-202ENST00000394202 TRBV7-6A0A0J9YX20 115 aa14.37□□□□□ -0.11
CNN3-202ENST00000394202 ETDCA0A1B0GVM5 59 aa14.37□□□□□ -0.11
CNN3-202ENST00000394202 LINC00528Q8N1L1 170 aa14.36□□□□□ -0.11
CNN3-202ENST00000394202 PRLHP81277 87 aa14.35□□□□□ -0.11
CNN3-202ENST00000394202 LINC00575Q6W349 94 aa14.35□□□□□ -0.11
CNN3-202ENST00000394202 Q6ZRX8 168 aa14.35□□□□□ -0.11
CNN3-202ENST00000394202 FAM19A1Q7Z5A9 133 aa14.34□□□□□ -0.11
CNN3-202ENST00000394202 A0A1B0GV72 72 aa14.34□□□□□ -0.11
CNN3-202ENST00000394202 Q9BRP9 147 aa14.34□□□□□ -0.11
CNN3-202ENST00000394202 VPS13BQ7Z7G8 4022 aa14.33□□□□□ -0.12
CNN3-202ENST00000394202 FAM240AA0A1B0GVK7 77 aa14.33□□□□□ -0.12
CNN3-202ENST00000394202 BCE1O60756 84 aa14.33□□□□□ -0.12
CNN3-202ENST00000394202 C1orf137Q5JT78 98 aa14.31□□□□□ -0.12
CNN3-202ENST00000394202 SMR3BP02814 79 aaPredicted RBP14.3□□□□□ -0.12
CNN3-202ENST00000394202 SNCGO76070 127 aa14.29□□□□□ -0.12
CNN3-202ENST00000394202 hADV29S1A0JD25 119 aa14.27□□□□□ -0.12
CNN3-202ENST00000394202 ERC2-IT1O76042 136 aa14.27□□□□□ -0.12
CNN3-202ENST00000394202 KRTAP13-1Q8IUC0 172 aa14.27□□□□□ -0.12
CNN3-202ENST00000394202 SMCR5Q8TEV8 140 aa14.27□□□□□ -0.12
CNN3-202ENST00000394202 FAT1Q14517 4588 aa14.26□□□□□ -0.13
CNN3-202ENST00000394202 BAALC-AS2P0C853 105 aa14.26□□□□□ -0.13
CNN3-202ENST00000394202 UBE2AP49459 152 aa14.25□□□□□ -0.13
CNN3-202ENST00000394202 HIGD2AQ9BW72 106 aa14.24□□□□□ -0.13
CNN3-202ENST00000394202 ACYP1P07311 99 aa14.23□□□□□ -0.13
CNN3-202ENST00000394202 H0Y9J4 135 aa14.23□□□□□ -0.13
CNN3-202ENST00000394202 INAFM2P0DMQ5 153 aa14.23□□□□□ -0.13
CNN3-202ENST00000394202 Q6Q795 121 aa14.23□□□□□ -0.13
CNN3-202ENST00000394202 HSPG2P98160 4391 aa14.22□□□□□ -0.13
CNN3-202ENST00000394202 DHRS4-AS1Q9P1J3 65 aa14.22□□□□□ -0.13
CNN3-202ENST00000394202 A0A1B0GX51 115 aa14.22□□□□□ -0.13
CNN3-202ENST00000394202 Q6ZQY7 126 aa14.22□□□□□ -0.13
CNN3-202ENST00000394202 IGLV7-43P04211 117 aa14.2□□□□□ -0.14
CNN3-202ENST00000394202 ST20-AS1Q8NBB2 130 aa14.2□□□□□ -0.14
CNN3-202ENST00000394202 DNAL4O96015 105 aa14.19□□□□□ -0.14
CNN3-202ENST00000394202 ZNF861PO60384 105 aa14.17□□□□□ -0.14
CNN3-202ENST00000394202 CDK2AP2O75956 126 aa14.17□□□□□ -0.14
CNN3-202ENST00000394202 KIAA1109Q2LD37 5005 aa14.16□□□□□ -0.14
CNN3-202ENST00000394202 RYR1P21817 5038 aa14.15□□□□□ -0.14
CNN3-202ENST00000394202 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.14□□□□□ -0.15
CNN3-202ENST00000394202 RPL37AP61513 92 aaKnown RBP14.13□□□□□ -0.15
CNN3-202ENST00000394202 DEFB105AQ8NG35 78 aa14.13□□□□□ -0.15
CNN3-202ENST00000394202 LINC01547P58512 204 aaPredicted RBP14.12□□□□□ -0.15
CNN3-202ENST00000394202 ORMDL1Q9P0S3 153 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms