RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 SPAG11AQ6PDA7 123 aa4.55□□□□□ -1.68
CASP4-201ENST00000393150 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
CASP4-201ENST00000393150 C20orf78Q9BR46 151 aa4.55□□□□□ -1.68
CASP4-201ENST00000393150 NDUFA12Q9UI09 145 aa4.55□□□□□ -1.68
CASP4-201ENST00000393150 TRBV6-5A0A0K0K1A5 114 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 H3BUT2 72 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 BCE1O60756 84 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 CFC1P0CG37 223 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 UBE2AP49459 152 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 HERVK_113P61574 105 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 ASB16-AS1Q495Z4 193 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 UNQ6190/PRO20217Q6UXQ8 127 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 KRTAP11-1Q8IUC1 163 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 SMIM2Q9BVW6 85 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 TP73-AS1Q9UF72 201 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
CASP4-201ENST00000393150 F8VRH5 84 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 ZC2HC1BQ5TFG8 222 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 Q6ZVH6 145 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 CEND1Q8N111 149 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 PRAC1Q96KF2 57 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 C22orf24Q9Y442 160 aa4.53□□□□□ -1.68
CASP4-201ENST00000393150 CKS1BP61024 79 aa4.52□□□□□ -1.69
CASP4-201ENST00000393150 RPL32P62910 135 aaKnown RBP4.52□□□□□ -1.69
CASP4-201ENST00000393150 RNASE13Q5GAN3 156 aaKnown RBP4.52□□□□□ -1.69
CASP4-201ENST00000393150 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
CASP4-201ENST00000393150 TRBV27A0A0K0K1C4 114 aa4.51□□□□□ -1.69
CASP4-201ENST00000393150 A4D1N5 150 aa4.51□□□□□ -1.69
CASP4-201ENST00000393150 SCGB1A1P11684 91 aa4.51□□□□□ -1.69
CASP4-201ENST00000393150 MRPL55Q7Z7F7 128 aaKnown RBP4.51□□□□□ -1.69
CASP4-201ENST00000393150 PCP2Q8IVA1 136 aa4.51□□□□□ -1.69
CASP4-201ENST00000393150 TOMM6Q96B49 74 aa4.51□□□□□ -1.69
CASP4-201ENST00000393150 HIST1H4GQ99525 98 aa4.51□□□□□ -1.69
CASP4-201ENST00000393150 NHP2Q9NX24 153 aaKnown RBP4.51□□□□□ -1.69
CASP4-201ENST00000393150 F8W1H4 67 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 DAND5Q8N907 189 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 RAB37Q96AX2 223 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 LITAFQ99732 161 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 TIMM21Q9BVV7 248 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 CYSLTR1Q9Y271 337 aa4.5□□□□□ -1.69
CASP4-201ENST00000393150 CHTOPQ9Y3Y2 248 aaKnown RBP4.5□□□□□ -1.69
CASP4-201ENST00000393150 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 E9PLD3 99 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 M0R2T5 61 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 POLR2KP53803 58 aaKnown RBP4.49□□□□□ -1.69
CASP4-201ENST00000393150 FXYD2P54710 66 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 C6orf226Q5I0X4 101 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 ANAPC11Q9NYG5 84 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
CASP4-201ENST00000393150 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 A0A1B0GWB2 263 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 C9orf129Q5T035 196 aaKnown RBP4.48□□□□□ -1.69
CASP4-201ENST00000393150 LINC00242Q5T6M2 205 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 SCGB1D4Q6XE38 83 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 Q6ZUT4 128 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 VCX2Q9H322 139 aa4.48□□□□□ -1.69
CASP4-201ENST00000393150 ZNF815PA8K554 130 aa4.47□□□□□ -1.69
CASP4-201ENST00000393150 KRTAP13-2Q52LG2 175 aa4.47□□□□□ -1.69
CASP4-201ENST00000393150 NKAPP1Q8N9T2 125 aa4.47□□□□□ -1.69
CASP4-201ENST00000393150 TIMM17AQ99595 171 aa4.47□□□□□ -1.69
CASP4-201ENST00000393150 SPANXA1Q9NS26 97 aa4.47□□□□□ -1.69
CASP4-201ENST00000393150 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.69
CASP4-201ENST00000393150 PMVKQ15126 192 aa4.46□□□□□ -1.69
CASP4-201ENST00000393150 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.69
CASP4-201ENST00000393150 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.69
CASP4-201ENST00000393150 XAGE1AQ9HD64 81 aa4.46□□□□□ -1.69
CASP4-201ENST00000393150 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.69
CASP4-201ENST00000393150 TRBV20-1A0A075B6N2 111 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 C11orf86A6NJI1 115 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 K7ERJ3 54 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
CASP4-201ENST00000393150 KRTAP13-3Q3SY46 172 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
CASP4-201ENST00000393150 NAA38Q9BRA0 125 aaKnown RBP4.46□□□□□ -1.7
CASP4-201ENST00000393150 SPANXB1Q9NS25 103 aaPredicted RBP4.46□□□□□ -1.7
CASP4-201ENST00000393150 A0A1B0GV72 72 aa4.45□□□□□ -1.7
CASP4-201ENST00000393150 TMEM238C9JI98 176 aa4.45□□□□□ -1.7
CASP4-201ENST00000393150 LGALS3P17931 250 aaKnown RBP4.45□□□□□ -1.7
CASP4-201ENST00000393150 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
CASP4-201ENST00000393150 H3BMG7 143 aa4.44□□□□□ -1.7
CASP4-201ENST00000393150 SPINK1P00995 79 aa4.44□□□□□ -1.7
CASP4-201ENST00000393150 KIAA0087Q14695 138 aa4.44□□□□□ -1.7
CASP4-201ENST00000393150 MTURNQ8N3F0 131 aa4.44□□□□□ -1.7
CASP4-201ENST00000393150 PLEKHB2Q96CS7 222 aa4.44□□□□□ -1.7
CASP4-201ENST00000393150 SIGMAR1Q99720 223 aa4.44□□□□□ -1.7
CASP4-201ENST00000393150 ZNF706Q9Y5V0 76 aaPredicted RBP4.44□□□□□ -1.7
CASP4-201ENST00000393150 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
CASP4-201ENST00000393150 FAM218AQ96MZ4 157 aa4.43□□□□□ -1.7
CASP4-201ENST00000393150 TTTY13Q9BZ97 58 aa4.43□□□□□ -1.7
CASP4-201ENST00000393150 LEPROTO15243 131 aa4.42□□□□□ -1.7
CASP4-201ENST00000393150 CXCL5P42830 114 aa4.42□□□□□ -1.7
CASP4-201ENST00000393150 RPL39P62891 51 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms