RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KRTAP10-9P60411 292 aa11.48□□□□□ -0.57
TRAF3IP1-202ENST00000391993 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
TRAF3IP1-202ENST00000391993 IGKV4-1P06312 121 aa11.45□□□□□ -0.58
TRAF3IP1-202ENST00000391993 TEP1Q99973 2627 aaKnown RBP11.45□□□□□ -0.58
TRAF3IP1-202ENST00000391993 TRAV22A0A0B4J277 110 aa11.44□□□□□ -0.58
TRAF3IP1-202ENST00000391993 A0A087WSZ3 146 aa11.44□□□□□ -0.58
TRAF3IP1-202ENST00000391993 FSHBP01225 129 aa11.44□□□□□ -0.58
TRAF3IP1-202ENST00000391993 DEFB113Q30KQ7 82 aa11.44□□□□□ -0.58
TRAF3IP1-202ENST00000391993 UBE2AP49459 152 aa11.43□□□□□ -0.58
TRAF3IP1-202ENST00000391993 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
TRAF3IP1-202ENST00000391993 LELP1Q5T871 98 aa11.42□□□□□ -0.58
TRAF3IP1-202ENST00000391993 ST20-AS1Q8NBB2 130 aa11.42□□□□□ -0.58
TRAF3IP1-202ENST00000391993 NDUFB1O75438 58 aa11.42□□□□□ -0.58
TRAF3IP1-202ENST00000391993 HECTD1Q9ULT8 2610 aa11.42□□□□□ -0.58
TRAF3IP1-202ENST00000391993 IGLV6-57P01721 117 aa11.42□□□□□ -0.58
TRAF3IP1-202ENST00000391993 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 CDK2AP2O75956 126 aa11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 ELOF1P60002 83 aaKnown RBP11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 B9D2Q9BPU9 175 aa11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 MGAM2Q2M2H8 2515 aa11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 LYRM9A8MSI8 78 aa11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 K7EQZ3 153 aa11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 GIG44P09565 113 aaPredicted RBP11.41□□□□□ -0.58
TRAF3IP1-202ENST00000391993 PSCAO43653 123 aa11.4□□□□□ -0.58
TRAF3IP1-202ENST00000391993 IGHV4-30-4P0DP06 118 aa11.4□□□□□ -0.58
TRAF3IP1-202ENST00000391993 HELZ2Q9BYK8 2649 aaKnown RBP11.4□□□□□ -0.58
TRAF3IP1-202ENST00000391993 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
TRAF3IP1-202ENST00000391993 NIPBLQ6KC79 2804 aaeCLIP11.39□□□□□ -0.59
TRAF3IP1-202ENST00000391993 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-202ENST00000391993 C16orf95Q9H693 158 aa11.39□□□□□ -0.59
TRAF3IP1-202ENST00000391993 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-202ENST00000391993 HCG22E2RYF7 251 aa11.39□□□□□ -0.59
TRAF3IP1-202ENST00000391993 EPM2AB3EWF7 344 aa11.37□□□□□ -0.59
TRAF3IP1-202ENST00000391993 H0Y9P7 68 aa11.37□□□□□ -0.59
TRAF3IP1-202ENST00000391993 EGFEM1PQ0D2K5 195 aa11.37□□□□□ -0.59
TRAF3IP1-202ENST00000391993 NBEAL1Q6ZS30 2694 aa11.37□□□□□ -0.59
TRAF3IP1-202ENST00000391993 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
TRAF3IP1-202ENST00000391993 OCR1Q9BZK8 76 aa11.35□□□□□ -0.59
TRAF3IP1-202ENST00000391993 C9orf66Q5T8R8 295 aa11.34□□□□□ -0.59
TRAF3IP1-202ENST00000391993 SPAG11AQ6PDA7 123 aa11.34□□□□□ -0.59
TRAF3IP1-202ENST00000391993 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
TRAF3IP1-202ENST00000391993 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP1-202ENST00000391993 C7orf33Q8WU49 177 aa11.33□□□□□ -0.6
TRAF3IP1-202ENST00000391993 DHRS4-AS1Q9P1J3 65 aa11.32□□□□□ -0.6
TRAF3IP1-202ENST00000391993 HIVEP1P15822 2718 aa11.32□□□□□ -0.6
TRAF3IP1-202ENST00000391993 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
TRAF3IP1-202ENST00000391993 Q6ZRP5 223 aa11.31□□□□□ -0.6
TRAF3IP1-202ENST00000391993 VPREB1P12018 145 aa11.31□□□□□ -0.6
TRAF3IP1-202ENST00000391993 PRLHP81277 87 aa11.3□□□□□ -0.6
TRAF3IP1-202ENST00000391993 FLNBO75369 2602 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP1-202ENST00000391993 ERC2-IT1O76042 136 aa11.29□□□□□ -0.6
TRAF3IP1-202ENST00000391993 CSMD2Q7Z408 3487 aa11.28□□□□□ -0.6
TRAF3IP1-202ENST00000391993 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
TRAF3IP1-202ENST00000391993 Q6ZTC4 211 aa11.27□□□□□ -0.6
TRAF3IP1-202ENST00000391993 X6R8D5 127 aa11.27□□□□□ -0.6
TRAF3IP1-202ENST00000391993 Q8N377 158 aa11.26□□□□□ -0.61
TRAF3IP1-202ENST00000391993 Q8NBF4 154 aa11.26□□□□□ -0.61
TRAF3IP1-202ENST00000391993 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
TRAF3IP1-202ENST00000391993 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
TRAF3IP1-202ENST00000391993 CD164Q04900 197 aa11.24□□□□□ -0.61
TRAF3IP1-202ENST00000391993 A8MU10 97 aa11.24□□□□□ -0.61
TRAF3IP1-202ENST00000391993 A0A1W2PNM2 257 aa11.23□□□□□ -0.61
TRAF3IP1-202ENST00000391993 SERTAD4-AS1Q5TG53 156 aa11.23□□□□□ -0.61
TRAF3IP1-202ENST00000391993 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
TRAF3IP1-202ENST00000391993 SMR3AQ99954 134 aa11.22□□□□□ -0.61
TRAF3IP1-202ENST00000391993 PRR15Q8IV56 129 aa11.22□□□□□ -0.61
TRAF3IP1-202ENST00000391993 MAST4O15021 2626 aa11.21□□□□□ -0.61
TRAF3IP1-202ENST00000391993 DEFB131BA0A096LNP1 70 aa11.2□□□□□ -0.62
TRAF3IP1-202ENST00000391993 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
TRAF3IP1-202ENST00000391993 LINC00476Q8WZB0 136 aa11.2□□□□□ -0.62
TRAF3IP1-202ENST00000391993 IGSF10Q6WRI0 2623 aa11.19□□□□□ -0.62
TRAF3IP1-202ENST00000391993 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
TRAF3IP1-202ENST00000391993 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
TRAF3IP1-202ENST00000391993 IGLV9-49A0A0B4J1Y8 123 aa11.17□□□□□ -0.62
TRAF3IP1-202ENST00000391993 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
TRAF3IP1-202ENST00000391993 Q9BRP9 147 aa11.16□□□□□ -0.62
TRAF3IP1-202ENST00000391993 Q6ZRX8 168 aa11.15□□□□□ -0.62
TRAF3IP1-202ENST00000391993 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
TRAF3IP1-202ENST00000391993 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
TRAF3IP1-202ENST00000391993 Q1T7F1 81 aa11.13□□□□□ -0.63
TRAF3IP1-202ENST00000391993 KTN1-AS1Q86SY8 53 aa11.12□□□□□ -0.63
TRAF3IP1-202ENST00000391993 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
TRAF3IP1-202ENST00000391993 C11orf45Q8TAV5 145 aa11.12□□□□□ -0.63
TRAF3IP1-202ENST00000391993 COA5Q86WW8 74 aa11.12□□□□□ -0.63
TRAF3IP1-202ENST00000391993 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
TRAF3IP1-202ENST00000391993 DSCR10P59022 87 aa11.1□□□□□ -0.63
TRAF3IP1-202ENST00000391993 BSNQ9UPA5 3926 aa11.09□□□□□ -0.63
TRAF3IP1-202ENST00000391993 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
TRAF3IP1-202ENST00000391993 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
TRAF3IP1-202ENST00000391993 NSD1Q96L73 2696 aaPredicted RBP11.06□□□□□ -0.64
TRAF3IP1-202ENST00000391993 C16orf90A8MZG2 172 aa11.06□□□□□ -0.64
TRAF3IP1-202ENST00000391993 Q5VV11 94 aa11.04□□□□□ -0.64
TRAF3IP1-202ENST00000391993 C15orf56Q8N910 161 aa11.04□□□□□ -0.64
TRAF3IP1-202ENST00000391993 STAB1Q9NY15 2570 aa11.03□□□□□ -0.64
TRAF3IP1-202ENST00000391993 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
TRAF3IP1-202ENST00000391993 IGFL1Q6UW32 110 aa11.03□□□□□ -0.64
TRAF3IP1-202ENST00000391993 KCNQ1DNQ9H478 68 aa11.02□□□□□ -0.65
TRAF3IP1-202ENST00000391993 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
TRAF3IP1-202ENST00000391993 LOC101927531A0A1B0GV80 90 aa11□□□□□ -0.65
TRAF3IP1-202ENST00000391993 Q8NAQ8 132 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms