RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 A0A087WZ39 114 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 TRBV7-6A0A0J9YX20 115 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 IGKV2-29A2NJV5 120 aaPredicted RBP5.08□□□□□ -1.6
TRBV28-201ENST00000390400 LECT2O14960 151 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 SS18Q15532 418 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 LINC00336Q6ZUF6 198 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 C6orf223Q8N319 242 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 Q8N814 137 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 Q9HAA7 133 aa5.08□□□□□ -1.6
TRBV28-201ENST00000390400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.07□□□□□ -1.6
TRBV28-201ENST00000390400 A0A087WVE0 104 aa5.07□□□□□ -1.6
TRBV28-201ENST00000390400 HTN3P15516 51 aa5.07□□□□□ -1.6
TRBV28-201ENST00000390400 Q6ZTC4 211 aa5.07□□□□□ -1.6
TRBV28-201ENST00000390400 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 TRAV10A0A0B4J240 114 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 TRGV4A0A0C4DH28 118 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 TRBV7-4A0A0J9YYF1 115 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 CCL18P55774 89 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 RBM3P98179 157 aaKnown RBP5.06□□□□□ -1.6
TRBV28-201ENST00000390400 COX6A2Q02221 97 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 C1orf195Q5TG92 126 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 Q6ZQT0 140 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 Q8IZM0 81 aa5.06□□□□□ -1.6
TRBV28-201ENST00000390400 DEFB131BA0A096LNP1 70 aa5.05□□□□□ -1.6
TRBV28-201ENST00000390400 IGHV3OR16-9A0A0B4J2B5 98 aa5.05□□□□□ -1.6
TRBV28-201ENST00000390400 UBE2L6O14933 153 aa5.05□□□□□ -1.6
TRBV28-201ENST00000390400 ENHOQ6UWT2 76 aa5.05□□□□□ -1.6
TRBV28-201ENST00000390400 PRR15Q8IV56 129 aa5.05□□□□□ -1.6
TRBV28-201ENST00000390400 TRAV23DV6A0A075B6W5 121 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 NCR3O14931 201 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 LINC01547P58512 204 aaPredicted RBP5.04□□□□□ -1.6
TRBV28-201ENST00000390400 LINC00158P58513 81 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 SEC61GP60059 68 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 Q6ZRU5 148 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
TRBV28-201ENST00000390400 PRO0255Q9UI72 69 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
TRBV28-201ENST00000390400 NUPR2A6NF83 97 aa5.03□□□□□ -1.6
TRBV28-201ENST00000390400 C6orf226Q5I0X4 101 aa5.03□□□□□ -1.6
TRBV28-201ENST00000390400 F8WEM9 126 aa5.02□□□□□ -1.61
TRBV28-201ENST00000390400 ESRGQ1W209 222 aa5.02□□□□□ -1.61
TRBV28-201ENST00000390400 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
TRBV28-201ENST00000390400 NTM-AS1Q6ZSK4 140 aa5.02□□□□□ -1.61
TRBV28-201ENST00000390400 IGHV3-38A0A0C4DH36 116 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 A0A1B0GUV1 79 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 H3BNG1 76 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.01□□□□□ -1.61
TRBV28-201ENST00000390400 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 Q6ZVQ6 151 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 TMEM254Q8TBM7 123 aa5.01□□□□□ -1.61
TRBV28-201ENST00000390400 LOC100131303A0A0U1RQF7 123 aa5□□□□□ -1.61
TRBV28-201ENST00000390400 C9orf129Q5T035 196 aaKnown RBP5□□□□□ -1.61
TRBV28-201ENST00000390400 A0A0U1RRA0 63 aa4.99□□□□□ -1.61
TRBV28-201ENST00000390400 C3orf84H3BNL1 204 aa4.99□□□□□ -1.61
TRBV28-201ENST00000390400 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
TRBV28-201ENST00000390400 NREPQ16612 68 aa4.99□□□□□ -1.61
TRBV28-201ENST00000390400 Q1T7F1 81 aa4.99□□□□□ -1.61
TRBV28-201ENST00000390400 TENM2Q9NT68 2774 aa4.99□□□□□ -1.61
TRBV28-201ENST00000390400 A0A096LPF7 62 aa4.98□□□□□ -1.61
TRBV28-201ENST00000390400 LCE6AA0A183 80 aa4.98□□□□□ -1.61
TRBV28-201ENST00000390400 Q9UF83 564 aa4.98□□□□□ -1.61
TRBV28-201ENST00000390400 TRBV6-8A0A0A6YYG3 113 aa4.97□□□□□ -1.61
TRBV28-201ENST00000390400 A0A0U1RQV1 116 aa4.97□□□□□ -1.61
TRBV28-201ENST00000390400 COX7BP24311 80 aa4.97□□□□□ -1.61
TRBV28-201ENST00000390400 DEFB104AQ8WTQ1 72 aa4.97□□□□□ -1.61
TRBV28-201ENST00000390400 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
TRBV28-201ENST00000390400 CSMD3Q7Z407 3707 aa4.97□□□□□ -1.61
TRBV28-201ENST00000390400 BPY2O14599 106 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 NDUFB1O75438 58 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 FUSP35637 526 aaKnown RBP eCLIP4.96□□□□□ -1.62
TRBV28-201ENST00000390400 CD164Q04900 197 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 CASC10Q5T4H9 136 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 APLNQ9ULZ1 77 aa4.96□□□□□ -1.62
TRBV28-201ENST00000390400 GVQW2A0A096LPI5 108 aaPredicted RBP4.95□□□□□ -1.62
TRBV28-201ENST00000390400 HAMPP81172 84 aa4.95□□□□□ -1.62
TRBV28-201ENST00000390400 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
TRBV28-201ENST00000390400 RMI2Q96E14 147 aa4.95□□□□□ -1.62
TRBV28-201ENST00000390400 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
TRBV28-201ENST00000390400 TOMM7Q9P0U1 55 aa4.95□□□□□ -1.62
TRBV28-201ENST00000390400 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
TRBV28-201ENST00000390400 LINC00959A0A1B0GUT2 108 aa4.94□□□□□ -1.62
TRBV28-201ENST00000390400 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
TRBV28-201ENST00000390400 LELP1Q5T871 98 aa4.94□□□□□ -1.62
TRBV28-201ENST00000390400 UBE2DNLQ8IWF7 75 aa4.94□□□□□ -1.62
TRBV28-201ENST00000390400 PKIGQ9Y2B9 76 aa4.94□□□□□ -1.62
TRBV28-201ENST00000390400 CDK2AP2O75956 126 aa4.93□□□□□ -1.62
TRBV28-201ENST00000390400 C6orf99Q4VX62 202 aa4.93□□□□□ -1.62
TRBV28-201ENST00000390400 CD164L2Q6UWJ8 174 aa4.93□□□□□ -1.62
TRBV28-201ENST00000390400 LINC00588Q9Y4M8 146 aa4.93□□□□□ -1.62
TRBV28-201ENST00000390400 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
TRBV28-201ENST00000390400 ELOF1P60002 83 aaKnown RBP4.92□□□□□ -1.62
TRBV28-201ENST00000390400 DIRC1Q969H9 104 aa4.92□□□□□ -1.62
TRBV28-201ENST00000390400 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
TRBV28-201ENST00000390400 hDV103S1A0JD37 113 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms