RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 BOD1L2Q8IYS8 172 aa6.56□□□□□ -1.36
SOD1-202ENST00000389995 HIGD2AQ9BW72 106 aa6.56□□□□□ -1.36
SOD1-202ENST00000389995 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BKO60814 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BJP06899 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BOP23527 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BBP33778 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BDP58876 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 TSPEAR-AS2P59090 65 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BCP62807 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST2H2BEQ16778 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BHQ93079 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BNQ99877 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 HIST1H2BMQ99879 126 aa6.55□□□□□ -1.36
SOD1-202ENST00000389995 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
SOD1-202ENST00000389995 J3QQQ9 107 aa6.54□□□□□ -1.36
SOD1-202ENST00000389995 LGALS3P17931 250 aaKnown RBP6.54□□□□□ -1.36
SOD1-202ENST00000389995 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
SOD1-202ENST00000389995 NCR3O14931 201 aa6.53□□□□□ -1.36
SOD1-202ENST00000389995 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
SOD1-202ENST00000389995 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
SOD1-202ENST00000389995 NMUP48645 174 aa6.52□□□□□ -1.37
SOD1-202ENST00000389995 SYS1-DBNDD2H3BUS1 97 aa6.51□□□□□ -1.37
SOD1-202ENST00000389995 MIEN1Q9BRT3 115 aa6.51□□□□□ -1.37
SOD1-202ENST00000389995 SPINK1P00995 79 aa6.49□□□□□ -1.37
SOD1-202ENST00000389995 S100A12P80511 92 aa6.49□□□□□ -1.37
SOD1-202ENST00000389995 GAGE2AQ6NT46 116 aa6.49□□□□□ -1.37
SOD1-202ENST00000389995 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
SOD1-202ENST00000389995 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
SOD1-202ENST00000389995 TRBV10-3A0A0K0K1G6 114 aa6.48□□□□□ -1.37
SOD1-202ENST00000389995 E9PLD3 99 aa6.48□□□□□ -1.37
SOD1-202ENST00000389995 Q8N377 158 aa6.48□□□□□ -1.37
SOD1-202ENST00000389995 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
SOD1-202ENST00000389995 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
SOD1-202ENST00000389995 NPC2P61916 151 aa6.47□□□□□ -1.37
SOD1-202ENST00000389995 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
SOD1-202ENST00000389995 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
SOD1-202ENST00000389995 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
SOD1-202ENST00000389995 LOC107984156A0A0G2JMH3 177 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 M0R2T5 61 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 DDTP30046 118 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 KRTDAPP60985 99 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 LINC01545Q5VT33 79 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 ARL17AQ8IVW1 177 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 KCNQ1DNQ9H478 68 aa6.46□□□□□ -1.38
SOD1-202ENST00000389995 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
SOD1-202ENST00000389995 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
SOD1-202ENST00000389995 MOBPQ13875 183 aa6.45□□□□□ -1.38
SOD1-202ENST00000389995 S100A7L2Q5SY68 101 aa6.45□□□□□ -1.38
SOD1-202ENST00000389995 SPANXB1Q9NS25 103 aaPredicted RBP6.45□□□□□ -1.38
SOD1-202ENST00000389995 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
SOD1-202ENST00000389995 TRBV10-2A0A0K0K1G8 114 aa6.44□□□□□ -1.38
SOD1-202ENST00000389995 SPRR1AP35321 89 aa6.44□□□□□ -1.38
SOD1-202ENST00000389995 COA6Q5JTJ3 125 aaKnown RBP6.44□□□□□ -1.38
SOD1-202ENST00000389995 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
SOD1-202ENST00000389995 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
SOD1-202ENST00000389995 C20orf202A1L168 122 aa6.43□□□□□ -1.38
SOD1-202ENST00000389995 ZNF815PA8K554 130 aa6.43□□□□□ -1.38
SOD1-202ENST00000389995 NDUFC2O95298 119 aa6.43□□□□□ -1.38
SOD1-202ENST00000389995 USH2AO75445 5202 aa6.43□□□□□ -1.38
SOD1-202ENST00000389995 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
SOD1-202ENST00000389995 SLC25A20O43772 301 aa6.42□□□□□ -1.38
SOD1-202ENST00000389995 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
SOD1-202ENST00000389995 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
SOD1-202ENST00000389995 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
SOD1-202ENST00000389995 TIMM17BO60830 172 aa6.4□□□□□ -1.38
SOD1-202ENST00000389995 IGLV6-57P01721 117 aa6.4□□□□□ -1.38
SOD1-202ENST00000389995 LINC00308Q8TCZ7 52 aa6.4□□□□□ -1.38
SOD1-202ENST00000389995 TTTY13Q9BZ97 58 aa6.4□□□□□ -1.38
SOD1-202ENST00000389995 LINC00483Q53H64 154 aa6.39□□□□□ -1.39
SOD1-202ENST00000389995 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
SOD1-202ENST00000389995 ATOH7Q8N100 152 aa6.39□□□□□ -1.39
SOD1-202ENST00000389995 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
SOD1-202ENST00000389995 LITAFQ99732 161 aa6.39□□□□□ -1.39
SOD1-202ENST00000389995 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
SOD1-202ENST00000389995 S100A1P23297 94 aa6.38□□□□□ -1.39
SOD1-202ENST00000389995 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
SOD1-202ENST00000389995 JOSD1Q15040 202 aaPredicted RBP6.38□□□□□ -1.39
SOD1-202ENST00000389995 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
SOD1-202ENST00000389995 Q6ZRX8 168 aa6.38□□□□□ -1.39
SOD1-202ENST00000389995 SPANXCQ9NY87 97 aa6.38□□□□□ -1.39
SOD1-202ENST00000389995 CBY1Q9Y3M2 126 aa6.38□□□□□ -1.39
SOD1-202ENST00000389995 ZNF73O43830 326 aaPredicted RBP6.37□□□□□ -1.39
SOD1-202ENST00000389995 HINT1P49773 126 aaPredicted RBP6.37□□□□□ -1.39
SOD1-202ENST00000389995 AKR1D1P51857 326 aa6.37□□□□□ -1.39
SOD1-202ENST00000389995 S100A2P29034 98 aa6.36□□□□□ -1.39
SOD1-202ENST00000389995 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
SOD1-202ENST00000389995 Q9BRP9 147 aa6.36□□□□□ -1.39
SOD1-202ENST00000389995 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
SOD1-202ENST00000389995 LINC00518Q8N0U6 118 aa6.34□□□□□ -1.39
SOD1-202ENST00000389995 COPS9Q8WXC6 57 aa6.34□□□□□ -1.39
SOD1-202ENST00000389995 SPANXDQ9BXN6 97 aa6.34□□□□□ -1.39
SOD1-202ENST00000389995 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
SOD1-202ENST00000389995 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.39
SOD1-202ENST00000389995 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
SOD1-202ENST00000389995 S100A6P06703 90 aa6.33□□□□□ -1.4
SOD1-202ENST00000389995 C9orf153Q5TBE3 101 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms