RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
SCFD2-201ENST00000388940 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
SCFD2-201ENST00000388940 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
SCFD2-201ENST00000388940 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
SCFD2-201ENST00000388940 A0A087WVE0 104 aa9.78□□□□□ -0.84
SCFD2-201ENST00000388940 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
SCFD2-201ENST00000388940 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
SCFD2-201ENST00000388940 TRBV7-4A0A0J9YYF1 115 aa9.77□□□□□ -0.85
SCFD2-201ENST00000388940 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
SCFD2-201ENST00000388940 BAHCC1Q9P281 2608 aa9.77□□□□□ -0.85
SCFD2-201ENST00000388940 FAM236DA0A1B0GTK5 79 aa9.75□□□□□ -0.85
SCFD2-201ENST00000388940 FAM236CP0DP71 79 aa9.75□□□□□ -0.85
SCFD2-201ENST00000388940 M0R2N4 97 aa9.75□□□□□ -0.85
SCFD2-201ENST00000388940 NKAPP1Q8N9T2 125 aa9.75□□□□□ -0.85
SCFD2-201ENST00000388940 SEC61GP60059 68 aa9.74□□□□□ -0.85
SCFD2-201ENST00000388940 RMI2Q96E14 147 aa9.74□□□□□ -0.85
SCFD2-201ENST00000388940 MAST4O15021 2626 aa9.73□□□□□ -0.85
SCFD2-201ENST00000388940 K7EIL1 84 aa9.73□□□□□ -0.85
SCFD2-201ENST00000388940 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
SCFD2-201ENST00000388940 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
SCFD2-201ENST00000388940 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
SCFD2-201ENST00000388940 Q6ZVQ6 151 aa9.72□□□□□ -0.85
SCFD2-201ENST00000388940 V9GYY9 64 aa9.72□□□□□ -0.85
SCFD2-201ENST00000388940 FAM19A1Q7Z5A9 133 aa9.71□□□□□ -0.85
SCFD2-201ENST00000388940 PRB2P02812 416 aaPredicted RBP9.71□□□□□ -0.86
SCFD2-201ENST00000388940 LINC01547P58512 204 aaPredicted RBP9.71□□□□□ -0.86
SCFD2-201ENST00000388940 SMIM26A0A096LP01 95 aa9.7□□□□□ -0.86
SCFD2-201ENST00000388940 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
SCFD2-201ENST00000388940 CXCL6P80162 114 aa9.69□□□□□ -0.86
SCFD2-201ENST00000388940 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
SCFD2-201ENST00000388940 BCE1O60756 84 aa9.68□□□□□ -0.86
SCFD2-201ENST00000388940 PRYO14603 147 aa9.67□□□□□ -0.86
SCFD2-201ENST00000388940 IGLV1-50A0A075B6I6 118 aa9.67□□□□□ -0.86
SCFD2-201ENST00000388940 KRTAP4-16G5E9R7 235 aaPredicted RBP9.66□□□□□ -0.86
SCFD2-201ENST00000388940 SPRR1AP35321 89 aa9.66□□□□□ -0.86
SCFD2-201ENST00000388940 HAMPP81172 84 aa9.66□□□□□ -0.86
SCFD2-201ENST00000388940 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
SCFD2-201ENST00000388940 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
SCFD2-201ENST00000388940 Q6ZRX8 168 aa9.64□□□□□ -0.87
SCFD2-201ENST00000388940 H7BZZ5 65 aa9.64□□□□□ -0.87
SCFD2-201ENST00000388940 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
SCFD2-201ENST00000388940 NOTCH1P46531 2555 aa9.63□□□□□ -0.87
SCFD2-201ENST00000388940 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
SCFD2-201ENST00000388940 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
SCFD2-201ENST00000388940 Q8N377 158 aa9.63□□□□□ -0.87
SCFD2-201ENST00000388940 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
SCFD2-201ENST00000388940 HUWE1Q7Z6Z7 4374 aaKnown RBP9.62□□□□□ -0.87
SCFD2-201ENST00000388940 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
SCFD2-201ENST00000388940 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
SCFD2-201ENST00000388940 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
SCFD2-201ENST00000388940 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
SCFD2-201ENST00000388940 Q9BRP9 147 aa9.6□□□□□ -0.87
SCFD2-201ENST00000388940 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
SCFD2-201ENST00000388940 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
SCFD2-201ENST00000388940 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
SCFD2-201ENST00000388940 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
SCFD2-201ENST00000388940 COL6A5A8TX70 2615 aa9.59□□□□□ -0.87
SCFD2-201ENST00000388940 DEFB105AQ8NG35 78 aa9.58□□□□□ -0.88
SCFD2-201ENST00000388940 A0A1B0GW54 56 aa9.57□□□□□ -0.88
SCFD2-201ENST00000388940 NBEAL1Q6ZS30 2694 aa9.56□□□□□ -0.88
SCFD2-201ENST00000388940 NDUFC1O43677 76 aa9.56□□□□□ -0.88
SCFD2-201ENST00000388940 TNP2Q05952 138 aa9.55□□□□□ -0.88
SCFD2-201ENST00000388940 CNBPP62633 177 aaKnown RBP9.55□□□□□ -0.88
SCFD2-201ENST00000388940 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
SCFD2-201ENST00000388940 NREPQ16612 68 aa9.54□□□□□ -0.88
SCFD2-201ENST00000388940 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
SCFD2-201ENST00000388940 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
SCFD2-201ENST00000388940 APLNQ9ULZ1 77 aa9.53□□□□□ -0.88
SCFD2-201ENST00000388940 SCXQ7RTU7 201 aa9.52□□□□□ -0.88
SCFD2-201ENST00000388940 C16orf90A8MZG2 172 aa9.52□□□□□ -0.89
SCFD2-201ENST00000388940 ST20-AS1Q8NBB2 130 aa9.52□□□□□ -0.89
SCFD2-201ENST00000388940 FUSP35637 526 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCFD2-201ENST00000388940 ERC2-IT1O76042 136 aa9.5□□□□□ -0.89
SCFD2-201ENST00000388940 A0A096LNI7 61 aa9.5□□□□□ -0.89
SCFD2-201ENST00000388940 UBE2BP63146 152 aa9.5□□□□□ -0.89
SCFD2-201ENST00000388940 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
SCFD2-201ENST00000388940 A0A0U1RQV1 116 aa9.49□□□□□ -0.89
SCFD2-201ENST00000388940 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
SCFD2-201ENST00000388940 C3orf84H3BNL1 204 aa9.48□□□□□ -0.89
SCFD2-201ENST00000388940 PSCAO43653 123 aa9.48□□□□□ -0.89
SCFD2-201ENST00000388940 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
SCFD2-201ENST00000388940 UBE2DNLQ8IWF7 75 aa9.48□□□□□ -0.89
SCFD2-201ENST00000388940 F8WEM9 126 aa9.48□□□□□ -0.89
SCFD2-201ENST00000388940 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
SCFD2-201ENST00000388940 BPY2O14599 106 aa9.47□□□□□ -0.89
SCFD2-201ENST00000388940 Q8NBF4 154 aa9.47□□□□□ -0.89
SCFD2-201ENST00000388940 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
SCFD2-201ENST00000388940 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
SCFD2-201ENST00000388940 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
SCFD2-201ENST00000388940 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
SCFD2-201ENST00000388940 SMIM29Q86T20 159 aa9.46□□□□□ -0.9
SCFD2-201ENST00000388940 IGKV2-24A0A0C4DH68 120 aa9.43□□□□□ -0.9
SCFD2-201ENST00000388940 Q8N9L7 120 aa9.43□□□□□ -0.9
SCFD2-201ENST00000388940 MGAM2Q2M2H8 2515 aa9.42□□□□□ -0.9
SCFD2-201ENST00000388940 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
SCFD2-201ENST00000388940 SNURFQ9Y675 71 aa9.41□□□□□ -0.9
SCFD2-201ENST00000388940 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
SCFD2-201ENST00000388940 PRR15Q8IV56 129 aa9.4□□□□□ -0.9
SCFD2-201ENST00000388940 PMAIP1Q13794 54 aa9.4□□□□□ -0.91
SCFD2-201ENST00000388940 IGLV8-61A0A075B6I0 122 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms