RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
PCDHA4-201ENST00000378125 B5MCH6 92 aa12.43□□□□□ -0.42
PCDHA4-201ENST00000378125 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
PCDHA4-201ENST00000378125 DNAH7Q8WXX0 4024 aa12.43□□□□□ -0.42
PCDHA4-201ENST00000378125 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
PCDHA4-201ENST00000378125 KCNQ1DNQ9H478 68 aa12.42□□□□□ -0.42
PCDHA4-201ENST00000378125 DEFB105AQ8NG35 78 aa12.42□□□□□ -0.42
PCDHA4-201ENST00000378125 LOC110117498A0A087WWA1 95 aa12.4□□□□□ -0.42
PCDHA4-201ENST00000378125 HIST1H4AP62805 103 aaKnown RBP12.4□□□□□ -0.42
PCDHA4-201ENST00000378125 APLNQ9ULZ1 77 aa12.39□□□□□ -0.43
PCDHA4-201ENST00000378125 PSCAO43653 123 aa12.39□□□□□ -0.43
PCDHA4-201ENST00000378125 UBL5Q9BZL1 73 aa12.38□□□□□ -0.43
PCDHA4-201ENST00000378125 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
PCDHA4-201ENST00000378125 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 LOC107984640A0A0U1RRK4 108 aa12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 SS18L2Q9UHA2 77 aa12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 PLA2G2DQ9UNK4 145 aa12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 IGKV2-24A0A0C4DH68 120 aa12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 H3BQ85 93 aa12.36□□□□□ -0.43
PCDHA4-201ENST00000378125 FAM19A1Q7Z5A9 133 aa12.33□□□□□ -0.44
PCDHA4-201ENST00000378125 MRPL55Q7Z7F7 128 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-201ENST00000378125 TRBV7-4A0A0J9YYF1 115 aa12.33□□□□□ -0.44
PCDHA4-201ENST00000378125 GHRHP01286 108 aa12.33□□□□□ -0.44
PCDHA4-201ENST00000378125 PLECQ15149 4684 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-201ENST00000378125 ETDCA0A1B0GVM5 59 aa12.32□□□□□ -0.44
PCDHA4-201ENST00000378125 C3orf22Q8N5N4 141 aa12.32□□□□□ -0.44
PCDHA4-201ENST00000378125 Q9BRP9 147 aa12.32□□□□□ -0.44
PCDHA4-201ENST00000378125 A0A096LNI7 61 aa12.31□□□□□ -0.44
PCDHA4-201ENST00000378125 HAMPP81172 84 aa12.31□□□□□ -0.44
PCDHA4-201ENST00000378125 Q6ZRX8 168 aa12.31□□□□□ -0.44
PCDHA4-201ENST00000378125 IGLV5-37A0A075B6J1 123 aa12.31□□□□□ -0.44
PCDHA4-201ENST00000378125 Q6ZVQ6 151 aa12.3□□□□□ -0.44
PCDHA4-201ENST00000378125 KRTAP4-16G5E9R7 235 aaPredicted RBP12.29□□□□□ -0.44
PCDHA4-201ENST00000378125 Q8N377 158 aa12.29□□□□□ -0.44
PCDHA4-201ENST00000378125 ST20-AS1Q8NBB2 130 aa12.29□□□□□ -0.44
PCDHA4-201ENST00000378125 PRYO14603 147 aa12.29□□□□□ -0.44
PCDHA4-201ENST00000378125 PDE6GP18545 87 aa12.29□□□□□ -0.44
PCDHA4-201ENST00000378125 DYNC2H1Q8NCM8 4307 aaKnown RBP12.28□□□□□ -0.44
PCDHA4-201ENST00000378125 ERC2-IT1O76042 136 aa12.26□□□□□ -0.45
PCDHA4-201ENST00000378125 LINC01547P58512 204 aaPredicted RBP12.26□□□□□ -0.45
PCDHA4-201ENST00000378125 A0A1W2PNN7 141 aa12.26□□□□□ -0.45
PCDHA4-201ENST00000378125 SPRR1AP35321 89 aa12.26□□□□□ -0.45
PCDHA4-201ENST00000378125 ATP5EP2Q5VTU8 51 aa12.26□□□□□ -0.45
PCDHA4-201ENST00000378125 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
PCDHA4-201ENST00000378125 ATOX1O00244 68 aa12.25□□□□□ -0.45
PCDHA4-201ENST00000378125 UBE2BP63146 152 aa12.25□□□□□ -0.45
PCDHA4-201ENST00000378125 DHRS4-AS1Q9P1J3 65 aa12.25□□□□□ -0.45
PCDHA4-201ENST00000378125 CHTF8P0CG12 524 aa12.24□□□□□ -0.45
PCDHA4-201ENST00000378125 REG3GQ6UW15 175 aa12.23□□□□□ -0.45
PCDHA4-201ENST00000378125 C16orf90A8MZG2 172 aa12.22□□□□□ -0.45
PCDHA4-201ENST00000378125 CNBPP62633 177 aaKnown RBP12.22□□□□□ -0.45
PCDHA4-201ENST00000378125 PRKDCP78527 4128 aaKnown RBP12.22□□□□□ -0.45
PCDHA4-201ENST00000378125 C9orf153Q5TBE3 101 aa12.21□□□□□ -0.45
PCDHA4-201ENST00000378125 STARD9Q9P2P6 4700 aa12.2□□□□□ -0.46
PCDHA4-201ENST00000378125 C3orf84H3BNL1 204 aa12.2□□□□□ -0.46
PCDHA4-201ENST00000378125 UQCRQO14949 82 aa12.2□□□□□ -0.46
PCDHA4-201ENST00000378125 COX7CP15954 63 aa12.2□□□□□ -0.46
PCDHA4-201ENST00000378125 NBDYA0A0U1RRE5 68 aa12.19□□□□□ -0.46
PCDHA4-201ENST00000378125 NUPR2A6NF83 97 aa12.19□□□□□ -0.46
PCDHA4-201ENST00000378125 PRLHP81277 87 aa12.18□□□□□ -0.46
PCDHA4-201ENST00000378125 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
PCDHA4-201ENST00000378125 PHF5AQ7RTV0 110 aaKnown RBP12.15□□□□□ -0.46
PCDHA4-201ENST00000378125 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
PCDHA4-201ENST00000378125 C14orf177Q52M58 125 aa12.14□□□□□ -0.47
PCDHA4-201ENST00000378125 IGLV5-48A0A075B6I7 105 aa12.14□□□□□ -0.47
PCDHA4-201ENST00000378125 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
PCDHA4-201ENST00000378125 SERP2Q8N6R1 65 aa12.12□□□□□ -0.47
PCDHA4-201ENST00000378125 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
PCDHA4-201ENST00000378125 FUSP35637 526 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHA4-201ENST00000378125 Q8N9L7 120 aa12.12□□□□□ -0.47
PCDHA4-201ENST00000378125 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
PCDHA4-201ENST00000378125 CXCL6P80162 114 aa12.11□□□□□ -0.47
PCDHA4-201ENST00000378125 A0A0G2JQZ4 141 aa12.11□□□□□ -0.47
PCDHA4-201ENST00000378125 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
PCDHA4-201ENST00000378125 CYSTM1Q9H1C7 97 aa12.11□□□□□ -0.47
PCDHA4-201ENST00000378125 NREPQ16612 68 aa12.1□□□□□ -0.47
PCDHA4-201ENST00000378125 SRRM2Q9UQ35 2752 aaKnown RBP12.1□□□□□ -0.47
PCDHA4-201ENST00000378125 Q6ZRN7 208 aaPredicted RBP12.1□□□□□ -0.47
PCDHA4-201ENST00000378125 A0A1W2PNM2 257 aa12.09□□□□□ -0.47
PCDHA4-201ENST00000378125 C9orf163Q8N9P6 203 aa12.09□□□□□ -0.47
PCDHA4-201ENST00000378125 PANO1I0J062 215 aa12.09□□□□□ -0.47
PCDHA4-201ENST00000378125 TNP2Q05952 138 aa12.08□□□□□ -0.48
PCDHA4-201ENST00000378125 DPH3Q96FX2 82 aa12.08□□□□□ -0.48
PCDHA4-201ENST00000378125 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
PCDHA4-201ENST00000378125 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
PCDHA4-201ENST00000378125 CRYGAP11844 174 aa12.04□□□□□ -0.48
PCDHA4-201ENST00000378125 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
PCDHA4-201ENST00000378125 BPY2O14599 106 aa12.03□□□□□ -0.48
PCDHA4-201ENST00000378125 KMT2AQ03164 3969 aa12.02□□□□□ -0.49
PCDHA4-201ENST00000378125 LINC00476Q8WZB0 136 aa12.02□□□□□ -0.49
PCDHA4-201ENST00000378125 EPM2AB3EWF7 344 aa12.01□□□□□ -0.49
PCDHA4-201ENST00000378125 Q8NBF4 154 aa12□□□□□ -0.49
PCDHA4-201ENST00000378125 F8WEM9 126 aa12□□□□□ -0.49
PCDHA4-201ENST00000378125 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
PCDHA4-201ENST00000378125 IGKV4-1P06312 121 aa11.97□□□□□ -0.49
PCDHA4-201ENST00000378125 DNAH2Q9P225 4427 aa11.96□□□□□ -0.49
PCDHA4-201ENST00000378125 UBE2AP49459 152 aa11.96□□□□□ -0.49
PCDHA4-201ENST00000378125 IGFL1Q6UW32 110 aa11.96□□□□□ -0.49
PCDHA4-201ENST00000378125 C20orf197Q8N268 126 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms