RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NKAPP1Q8N9T2 125 aa16.55■□□□□ 0.24
C9orf40-201ENST00000376854 C20orf197Q8N268 126 aa16.54■□□□□ 0.24
C9orf40-201ENST00000376854 SERTAD4-AS1Q5TG53 156 aa16.53■□□□□ 0.24
C9orf40-201ENST00000376854 SCXQ7RTU7 201 aa16.53■□□□□ 0.24
C9orf40-201ENST00000376854 DPH3Q96FX2 82 aa16.53■□□□□ 0.24
C9orf40-201ENST00000376854 TRAV7A0A075B6U4 112 aa16.52■□□□□ 0.24
C9orf40-201ENST00000376854 TRAV10A0A0B4J240 114 aa16.52■□□□□ 0.24
C9orf40-201ENST00000376854 KCNQ1DNQ9H478 68 aa16.52■□□□□ 0.24
C9orf40-201ENST00000376854 DNAH10OSP0CZ25 163 aa16.52■□□□□ 0.23
C9orf40-201ENST00000376854 C7orf33Q8WU49 177 aa16.51■□□□□ 0.23
C9orf40-201ENST00000376854 COL6A5A8TX70 2615 aa16.49■□□□□ 0.23
C9orf40-201ENST00000376854 PRB2P02812 416 aaPredicted RBP16.48■□□□□ 0.23
C9orf40-201ENST00000376854 NBEAL1Q6ZS30 2694 aa16.48■□□□□ 0.23
C9orf40-201ENST00000376854 FAM19A5Q7Z5A7 132 aaPredicted RBP16.46■□□□□ 0.23
C9orf40-201ENST00000376854 DEFB105AQ8NG35 78 aa16.45■□□□□ 0.22
C9orf40-201ENST00000376854 TLX1NBP0CAT3 122 aa16.44■□□□□ 0.22
C9orf40-201ENST00000376854 Q8N377 158 aa16.41■□□□□ 0.22
C9orf40-201ENST00000376854 LINC00588Q9Y4M8 146 aa16.41■□□□□ 0.22
C9orf40-201ENST00000376854 MRAPQ8TCY5 172 aa16.4■□□□□ 0.22
C9orf40-201ENST00000376854 PLA2G2DQ9UNK4 145 aa16.4■□□□□ 0.22
C9orf40-201ENST00000376854 RPL37AP8A6NKH3 93 aa16.4■□□□□ 0.22
C9orf40-201ENST00000376854 HUWE1Q7Z6Z7 4374 aaKnown RBP16.39■□□□□ 0.21
C9orf40-201ENST00000376854 CASC10Q5T4H9 136 aa16.39■□□□□ 0.21
C9orf40-201ENST00000376854 FAM168BA1KXE4 195 aa16.38■□□□□ 0.21
C9orf40-201ENST00000376854 NREPQ16612 68 aa16.37■□□□□ 0.21
C9orf40-201ENST00000376854 DHRS4-AS1Q9P1J3 65 aa16.37■□□□□ 0.21
C9orf40-201ENST00000376854 OXTP01178 125 aa16.36■□□□□ 0.21
C9orf40-201ENST00000376854 Q6ZRX8 168 aa16.36■□□□□ 0.21
C9orf40-201ENST00000376854 KLKP1Q107X0 134 aa16.35■□□□□ 0.21
C9orf40-201ENST00000376854 C3orf84H3BNL1 204 aa16.35■□□□□ 0.21
C9orf40-201ENST00000376854 TM2D3Q9BRN9 247 aa16.35■□□□□ 0.21
C9orf40-201ENST00000376854 IGLV1-50A0A075B6I6 118 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 IGLV5-48A0A075B6I7 105 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 H7BZZ5 65 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 PRYO14603 147 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 Q8N9L7 120 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 DNAH1Q9P2D7 4330 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 IGLV5-37A0A075B6J1 123 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 Q9BRP9 147 aa16.34■□□□□ 0.21
C9orf40-201ENST00000376854 KRTAP4-16G5E9R7 235 aaPredicted RBP16.33■□□□□ 0.2
C9orf40-201ENST00000376854 SNURFQ9Y675 71 aa16.33■□□□□ 0.2
C9orf40-201ENST00000376854 FAM236DA0A1B0GTK5 79 aa16.31■□□□□ 0.2
C9orf40-201ENST00000376854 ETDCA0A1B0GVM5 59 aa16.31■□□□□ 0.2
C9orf40-201ENST00000376854 FAM236CP0DP71 79 aa16.31■□□□□ 0.2
C9orf40-201ENST00000376854 BPY2O14599 106 aa16.3■□□□□ 0.2
C9orf40-201ENST00000376854 IGKV4-1P06312 121 aa16.3■□□□□ 0.2
C9orf40-201ENST00000376854 SPRR1AP35321 89 aa16.3■□□□□ 0.2
C9orf40-201ENST00000376854 KRTAP7-1Q8IUC3 87 aa16.3■□□□□ 0.2
C9orf40-201ENST00000376854 RMI2Q96E14 147 aa16.29■□□□□ 0.2
C9orf40-201ENST00000376854 K7EIL1 84 aa16.26■□□□□ 0.19
C9orf40-201ENST00000376854 ST20-AS1Q8NBB2 130 aa16.26■□□□□ 0.19
C9orf40-201ENST00000376854 FUSP35637 526 aaKnown RBP eCLIP16.25■□□□□ 0.19
C9orf40-201ENST00000376854 MRPL55Q7Z7F7 128 aaKnown RBP16.25■□□□□ 0.19
C9orf40-201ENST00000376854 MGAM2Q2M2H8 2515 aa16.23■□□□□ 0.19
C9orf40-201ENST00000376854 A0A1W2PNM2 257 aa16.22■□□□□ 0.19
C9orf40-201ENST00000376854 TNP2Q05952 138 aa16.22■□□□□ 0.19
C9orf40-201ENST00000376854 F8WEM9 126 aa16.21■□□□□ 0.19
C9orf40-201ENST00000376854 C1orf137Q5JT78 98 aa16.21■□□□□ 0.19
C9orf40-201ENST00000376854 A0A1B0GW54 56 aa16.19■□□□□ 0.18
C9orf40-201ENST00000376854 ERC2-IT1O76042 136 aa16.19■□□□□ 0.18
C9orf40-201ENST00000376854 UBE2BP63146 152 aa16.18■□□□□ 0.18
C9orf40-201ENST00000376854 NDUFC1O43677 76 aa16.16■□□□□ 0.18
C9orf40-201ENST00000376854 TMEM254Q8TBM7 123 aa16.16■□□□□ 0.18
C9orf40-201ENST00000376854 Q8NBF4 154 aa16.15■□□□□ 0.18
C9orf40-201ENST00000376854 LYSTQ99698 3801 aa16.15■□□□□ 0.18
C9orf40-201ENST00000376854 SERP1Q9Y6X1 66 aa16.15■□□□□ 0.18
C9orf40-201ENST00000376854 OCR1Q9BZK8 76 aa16.14■□□□□ 0.17
C9orf40-201ENST00000376854 REG3GQ6UW15 175 aa16.13■□□□□ 0.17
C9orf40-201ENST00000376854 COL7A1Q02388 2944 aa16.13■□□□□ 0.17
C9orf40-201ENST00000376854 DNAH10Q8IVF4 4471 aa16.12■□□□□ 0.17
C9orf40-201ENST00000376854 STAB2Q8WWQ8 2551 aa16.12■□□□□ 0.17
C9orf40-201ENST00000376854 Q5XG85 94 aa16.12■□□□□ 0.17
C9orf40-201ENST00000376854 EPM2AB3EWF7 344 aa16.1■□□□□ 0.17
C9orf40-201ENST00000376854 SPRR4Q96PI1 79 aa16.1■□□□□ 0.17
C9orf40-201ENST00000376854 C4orf26Q17RF5 130 aa16.07■□□□□ 0.16
C9orf40-201ENST00000376854 C5orf47Q569G3 176 aa16.07■□□□□ 0.16
C9orf40-201ENST00000376854 SMIM29Q86T20 159 aa16.05■□□□□ 0.16
C9orf40-201ENST00000376854 DNAH9Q9NYC9 4486 aa16.04■□□□□ 0.16
C9orf40-201ENST00000376854 A0A096LNI7 61 aa16.03■□□□□ 0.16
C9orf40-201ENST00000376854 A0A0U1RQV1 116 aa16.02■□□□□ 0.15
C9orf40-201ENST00000376854 IGKV2-24A0A0C4DH68 120 aa16.01■□□□□ 0.15
C9orf40-201ENST00000376854 LINC00476Q8WZB0 136 aa16.01■□□□□ 0.15
C9orf40-201ENST00000376854 KRTAP1-5Q9BYS1 174 aa16.01■□□□□ 0.15
C9orf40-201ENST00000376854 C16orf90A8MZG2 172 aa16■□□□□ 0.15
C9orf40-201ENST00000376854 ATP5EP56381 51 aaPredicted RBP16■□□□□ 0.15
C9orf40-201ENST00000376854 DSCR10P59022 87 aa15.99■□□□□ 0.15
C9orf40-201ENST00000376854 FAM30AQ9NZY2 134 aa15.98■□□□□ 0.15
C9orf40-201ENST00000376854 A0A1W2PNN7 141 aa15.97■□□□□ 0.15
C9orf40-201ENST00000376854 PRLHP81277 87 aa15.97■□□□□ 0.15
C9orf40-201ENST00000376854 HRCT1Q6UXD1 115 aa15.97■□□□□ 0.15
C9orf40-201ENST00000376854 CNBPP62633 177 aaKnown RBP15.97■□□□□ 0.15
C9orf40-201ENST00000376854 PSCAO43653 123 aa15.96■□□□□ 0.15
C9orf40-201ENST00000376854 HIGD2AQ9BW72 106 aa15.95■□□□□ 0.14
C9orf40-201ENST00000376854 A0A0G2JQZ4 141 aa15.95■□□□□ 0.14
C9orf40-201ENST00000376854 K7EQZ3 153 aa15.95■□□□□ 0.14
C9orf40-201ENST00000376854 IGFL1Q6UW32 110 aa15.94■□□□□ 0.14
C9orf40-201ENST00000376854 TENM2Q9NT68 2774 aa15.92■□□□□ 0.14
C9orf40-201ENST00000376854 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.89■□□□□ 0.13
C9orf40-201ENST00000376854 DYNC2H1Q8NCM8 4307 aaKnown RBP15.89■□□□□ 0.13
C9orf40-201ENST00000376854 SMIM26A0A096LP01 95 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms