RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
VSX1-201ENST00000376707 Q6ZRX8 168 aa11.96□□□□□ -0.49
VSX1-201ENST00000376707 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
VSX1-201ENST00000376707 SPINK1P00995 79 aa11.95□□□□□ -0.5
VSX1-201ENST00000376707 LINC01545Q5VT33 79 aa11.95□□□□□ -0.5
VSX1-201ENST00000376707 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 Q9BRP9 147 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 FAT4Q6V0I7 4981 aa11.93□□□□□ -0.5
VSX1-201ENST00000376707 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
VSX1-201ENST00000376707 LCE2AQ5TA79 106 aaPredicted RBP11.92□□□□□ -0.5
VSX1-201ENST00000376707 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 NPC2P61916 151 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 MOBPQ13875 183 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 LITAFQ99732 161 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 TIMM17BO60830 172 aa11.9□□□□□ -0.5
VSX1-201ENST00000376707 KRTAP13-3Q3SY46 172 aa11.89□□□□□ -0.51
VSX1-201ENST00000376707 COA6Q5JTJ3 125 aaKnown RBP11.89□□□□□ -0.51
VSX1-201ENST00000376707 ZNF73O43830 326 aaPredicted RBP11.88□□□□□ -0.51
VSX1-201ENST00000376707 JOSD1Q15040 202 aaPredicted RBP11.88□□□□□ -0.51
VSX1-201ENST00000376707 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
VSX1-201ENST00000376707 LINC00308Q8TCZ7 52 aa11.87□□□□□ -0.51
VSX1-201ENST00000376707 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
VSX1-201ENST00000376707 C3orf79P0CE67 100 aa11.86□□□□□ -0.51
VSX1-201ENST00000376707 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
VSX1-201ENST00000376707 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
VSX1-201ENST00000376707 RPS29P62273 56 aaKnown RBP11.84□□□□□ -0.51
VSX1-201ENST00000376707 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
VSX1-201ENST00000376707 C5orf52A6NGY3 159 aa11.82□□□□□ -0.52
VSX1-201ENST00000376707 LCE2BO14633 110 aa11.82□□□□□ -0.52
VSX1-201ENST00000376707 Q8N377 158 aa11.82□□□□□ -0.52
VSX1-201ENST00000376707 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
VSX1-201ENST00000376707 HINT1P49773 126 aaPredicted RBP11.8□□□□□ -0.52
VSX1-201ENST00000376707 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
VSX1-201ENST00000376707 C9orf153Q5TBE3 101 aa11.8□□□□□ -0.52
VSX1-201ENST00000376707 SLC25A20O43772 301 aa11.79□□□□□ -0.52
VSX1-201ENST00000376707 KRTDAPP60985 99 aa11.79□□□□□ -0.52
VSX1-201ENST00000376707 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
VSX1-201ENST00000376707 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
VSX1-201ENST00000376707 OR13C6PQ8NH95 151 aa11.77□□□□□ -0.53
VSX1-201ENST00000376707 LINC00518Q8N0U6 118 aa11.76□□□□□ -0.53
VSX1-201ENST00000376707 C20orf202A1L168 122 aa11.75□□□□□ -0.53
VSX1-201ENST00000376707 SEC61BP60468 96 aaKnown RBP11.75□□□□□ -0.53
VSX1-201ENST00000376707 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
VSX1-201ENST00000376707 SPRR1BP22528 89 aa11.73□□□□□ -0.53
VSX1-201ENST00000376707 ANKRD39Q53RE8 183 aa11.73□□□□□ -0.53
VSX1-201ENST00000376707 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
VSX1-201ENST00000376707 ELOF1P60002 83 aaKnown RBP11.71□□□□□ -0.53
VSX1-201ENST00000376707 AKR1D1P51857 326 aa11.7□□□□□ -0.54
VSX1-201ENST00000376707 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
VSX1-201ENST00000376707 IFITM1P13164 125 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 COX7BP24311 80 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 C6orf99Q4VX62 202 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 SLC25A34Q6PIV7 304 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 Q6ZVH6 145 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 TRBV7-6A0A0J9YX20 115 aa11.67□□□□□ -0.54
VSX1-201ENST00000376707 KRTAP4-1Q9BYQ7 146 aa11.67□□□□□ -0.54
VSX1-201ENST00000376707 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
VSX1-201ENST00000376707 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
VSX1-201ENST00000376707 XP32Q5T750 250 aa11.65□□□□□ -0.54
VSX1-201ENST00000376707 SNRPEP62304 92 aaKnown RBP11.63□□□□□ -0.55
VSX1-201ENST00000376707 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
VSX1-201ENST00000376707 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
VSX1-201ENST00000376707 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
VSX1-201ENST00000376707 MUSTN1Q8IVN3 82 aa11.61□□□□□ -0.55
VSX1-201ENST00000376707 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
VSX1-201ENST00000376707 A6NDN8 102 aa11.59□□□□□ -0.55
VSX1-201ENST00000376707 HIST3H2BBQ8N257 126 aa11.59□□□□□ -0.55
VSX1-201ENST00000376707 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
VSX1-201ENST00000376707 TAL2Q16559 108 aa11.58□□□□□ -0.56
VSX1-201ENST00000376707 DEFB105AQ8NG35 78 aa11.57□□□□□ -0.56
VSX1-201ENST00000376707 HIST1H2BLQ99880 126 aa11.57□□□□□ -0.56
VSX1-201ENST00000376707 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 A4D1N5 150 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 Q1RN00 199 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 CD164Q04900 197 aa11.54□□□□□ -0.56
VSX1-201ENST00000376707 S100A2P29034 98 aa11.53□□□□□ -0.56
VSX1-201ENST00000376707 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
VSX1-201ENST00000376707 PRO1933Q9H354 126 aa11.52□□□□□ -0.57
VSX1-201ENST00000376707 KRTAP9-6A0A140TA67 174 aa11.51□□□□□ -0.57
VSX1-201ENST00000376707 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
VSX1-201ENST00000376707 C9orf92A6NGG3 77 aa11.5□□□□□ -0.57
VSX1-201ENST00000376707 S100A1P23297 94 aa11.5□□□□□ -0.57
VSX1-201ENST00000376707 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
VSX1-201ENST00000376707 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
VSX1-201ENST00000376707 H7C2G1 150 aa11.48□□□□□ -0.57
VSX1-201ENST00000376707 Q5XG85 94 aa11.47□□□□□ -0.57
VSX1-201ENST00000376707 PCOTHQ58A44 107 aa11.46□□□□□ -0.57
VSX1-201ENST00000376707 S100A6P06703 90 aa11.44□□□□□ -0.58
VSX1-201ENST00000376707 IGLV8-61A0A075B6I0 122 aa11.43□□□□□ -0.58
VSX1-201ENST00000376707 VAMP3Q15836 100 aa11.42□□□□□ -0.58
VSX1-201ENST00000376707 LCE2CQ5TA81 110 aa11.4□□□□□ -0.58
VSX1-201ENST00000376707 LINC00575Q6W349 94 aa11.4□□□□□ -0.58
VSX1-201ENST00000376707 A0A0G2JQZ4 141 aa11.38□□□□□ -0.59
VSX1-201ENST00000376707 C1orf195Q5TG92 126 aa11.38□□□□□ -0.59
VSX1-201ENST00000376707 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms