RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
VPS13A-205ENST00000376636 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
VPS13A-205ENST00000376636 A0A0A0MQY5 61 aa7.84□□□□□ -1.15
VPS13A-205ENST00000376636 H7BZZ5 65 aa7.84□□□□□ -1.15
VPS13A-205ENST00000376636 FAM104AQ969W3 186 aa7.84□□□□□ -1.15
VPS13A-205ENST00000376636 KCNQ1DNQ9H478 68 aa7.83□□□□□ -1.16
VPS13A-205ENST00000376636 A0A0D9SG42 100 aa7.82□□□□□ -1.16
VPS13A-205ENST00000376636 DNAH10OSP0CZ25 163 aa7.82□□□□□ -1.16
VPS13A-205ENST00000376636 DSCR10P59022 87 aa7.82□□□□□ -1.16
VPS13A-205ENST00000376636 IGFL1Q6UW32 110 aa7.82□□□□□ -1.16
VPS13A-205ENST00000376636 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
VPS13A-205ENST00000376636 CEP295Q9C0D2 2601 aa7.79□□□□□ -1.16
VPS13A-205ENST00000376636 FAM168BA1KXE4 195 aa7.79□□□□□ -1.16
VPS13A-205ENST00000376636 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
VPS13A-205ENST00000376636 CDSNQ15517 529 aa7.78□□□□□ -1.16
VPS13A-205ENST00000376636 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.16
VPS13A-205ENST00000376636 LITAFQ99732 161 aa7.77□□□□□ -1.17
VPS13A-205ENST00000376636 LINC00528Q8N1L1 170 aa7.76□□□□□ -1.17
VPS13A-205ENST00000376636 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
VPS13A-205ENST00000376636 ZNF861PO60384 105 aa7.75□□□□□ -1.17
VPS13A-205ENST00000376636 IGLV5-48A0A075B6I7 105 aa7.75□□□□□ -1.17
VPS13A-205ENST00000376636 EPG5Q9HCE0 2579 aa7.74□□□□□ -1.17
VPS13A-205ENST00000376636 Q8NAQ8 132 aa7.73□□□□□ -1.17
VPS13A-205ENST00000376636 COL4A2P08572 1712 aa7.72□□□□□ -1.17
VPS13A-205ENST00000376636 C15orf56Q8N910 161 aa7.72□□□□□ -1.17
VPS13A-205ENST00000376636 KRTAP10-9P60411 292 aa7.71□□□□□ -1.17
VPS13A-205ENST00000376636 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
VPS13A-205ENST00000376636 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
VPS13A-205ENST00000376636 H3BS24 57 aa7.7□□□□□ -1.18
VPS13A-205ENST00000376636 CENPFP49454 3210 aa7.7□□□□□ -1.18
VPS13A-205ENST00000376636 WWC2-AS2Q96NR7 200 aa7.69□□□□□ -1.18
VPS13A-205ENST00000376636 Q8N377 158 aa7.69□□□□□ -1.18
VPS13A-205ENST00000376636 WIPF1O43516 503 aa7.68□□□□□ -1.18
VPS13A-205ENST00000376636 Q75L30 129 aa7.68□□□□□ -1.18
VPS13A-205ENST00000376636 ZNF575Q86XF7 245 aa7.68□□□□□ -1.18
VPS13A-205ENST00000376636 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
VPS13A-205ENST00000376636 A0A1B0GU33 70 aa7.65□□□□□ -1.18
VPS13A-205ENST00000376636 Q8N1X5 172 aa7.65□□□□□ -1.18
VPS13A-205ENST00000376636 TLX1NBP0CAT3 122 aa7.63□□□□□ -1.19
VPS13A-205ENST00000376636 A0A1W2PPR1 153 aa7.62□□□□□ -1.19
VPS13A-205ENST00000376636 HECTD1Q9ULT8 2610 aa7.61□□□□□ -1.19
VPS13A-205ENST00000376636 HRES1P13985 223 aa7.61□□□□□ -1.19
VPS13A-205ENST00000376636 PRR34Q9NV39 138 aa7.6□□□□□ -1.19
VPS13A-205ENST00000376636 AKAP13Q12802 2813 aa7.59□□□□□ -1.19
VPS13A-205ENST00000376636 C9orf163Q8N9P6 203 aa7.58□□□□□ -1.2
VPS13A-205ENST00000376636 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
VPS13A-205ENST00000376636 MGAM2Q2M2H8 2515 aa7.57□□□□□ -1.2
VPS13A-205ENST00000376636 SPRR4Q96PI1 79 aa7.57□□□□□ -1.2
VPS13A-205ENST00000376636 NBEAL1Q6ZS30 2694 aa7.56□□□□□ -1.2
VPS13A-205ENST00000376636 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
VPS13A-205ENST00000376636 OCR1Q9BZK8 76 aa7.55□□□□□ -1.2
VPS13A-205ENST00000376636 ATRQ13535 2644 aa7.55□□□□□ -1.2
VPS13A-205ENST00000376636 Q6ZSA8 131 aa7.55□□□□□ -1.2
VPS13A-205ENST00000376636 PSORS1C2Q9UIG4 136 aa7.51□□□□□ -1.21
VPS13A-205ENST00000376636 MAST4O15021 2626 aa7.51□□□□□ -1.21
VPS13A-205ENST00000376636 A0A087WTM6 91 aa7.51□□□□□ -1.21
VPS13A-205ENST00000376636 CFAP46Q8IYW2 2715 aa7.51□□□□□ -1.21
VPS13A-205ENST00000376636 SPINK7P58062 85 aa7.5□□□□□ -1.21
VPS13A-205ENST00000376636 CNBPP62633 177 aaKnown RBP7.5□□□□□ -1.21
VPS13A-205ENST00000376636 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
VPS13A-205ENST00000376636 M0R2T5 61 aa7.48□□□□□ -1.21
VPS13A-205ENST00000376636 CENPEQ02224 2701 aa7.48□□□□□ -1.21
VPS13A-205ENST00000376636 LINC01558Q9Y6Z2 57 aa7.47□□□□□ -1.21
VPS13A-205ENST00000376636 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
VPS13A-205ENST00000376636 A0A1W2PNN7 141 aa7.47□□□□□ -1.21
VPS13A-205ENST00000376636 KLK9Q2XQG4 91 aa7.47□□□□□ -1.21
VPS13A-205ENST00000376636 CSAG1Q6PB30 78 aa7.47□□□□□ -1.21
VPS13A-205ENST00000376636 S4R3F8 94 aa7.47□□□□□ -1.21
VPS13A-205ENST00000376636 A0A1W2PNM2 257 aa7.46□□□□□ -1.21
VPS13A-205ENST00000376636 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.21
VPS13A-205ENST00000376636 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.21
VPS13A-205ENST00000376636 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
VPS13A-205ENST00000376636 KRTAP24-1Q3LI83 254 aa7.44□□□□□ -1.22
VPS13A-205ENST00000376636 TNP2Q05952 138 aa7.43□□□□□ -1.22
VPS13A-205ENST00000376636 C10orf142B7Z368 130 aa7.42□□□□□ -1.22
VPS13A-205ENST00000376636 FLNAP21333 2647 aaKnown RBP7.42□□□□□ -1.22
VPS13A-205ENST00000376636 R4GN34 69 aa7.41□□□□□ -1.22
VPS13A-205ENST00000376636 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-205ENST00000376636 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-205ENST00000376636 STAB1Q9NY15 2570 aa7.41□□□□□ -1.22
VPS13A-205ENST00000376636 ROMO1P60602 79 aa7.4□□□□□ -1.23
VPS13A-205ENST00000376636 PRAC1Q96KF2 57 aa7.37□□□□□ -1.23
VPS13A-205ENST00000376636 LINC00612Q8N6U2 182 aa7.37□□□□□ -1.23
VPS13A-205ENST00000376636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-205ENST00000376636 GIG44P09565 113 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-205ENST00000376636 ASB16-AS1Q495Z4 193 aa7.36□□□□□ -1.23
VPS13A-205ENST00000376636 C19orf73Q9NVV2 129 aa7.36□□□□□ -1.23
VPS13A-205ENST00000376636 Q5VV11 94 aa7.35□□□□□ -1.23
VPS13A-205ENST00000376636 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
VPS13A-205ENST00000376636 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
VPS13A-205ENST00000376636 ZCCHC13Q8WW36 166 aaKnown RBP7.35□□□□□ -1.23
VPS13A-205ENST00000376636 Q5XG85 94 aa7.35□□□□□ -1.23
VPS13A-205ENST00000376636 K7EIL1 84 aa7.34□□□□□ -1.23
VPS13A-205ENST00000376636 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
VPS13A-205ENST00000376636 KRTAP10-11P60412 298 aa7.34□□□□□ -1.23
VPS13A-205ENST00000376636 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
VPS13A-205ENST00000376636 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
VPS13A-205ENST00000376636 EP400Q96L91 3159 aa7.31□□□□□ -1.24
VPS13A-205ENST00000376636 FLNBO75369 2602 aaKnown RBP7.3□□□□□ -1.24
VPS13A-205ENST00000376636 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms