RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TMEM167AQ8TBQ9 72 aa5.9□□□□□ -1.46
UBR4-201ENST00000375218 PLA2G2AP14555 144 aa5.9□□□□□ -1.47
UBR4-201ENST00000375218 BPY2O14599 106 aa5.9□□□□□ -1.47
UBR4-201ENST00000375218 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
UBR4-201ENST00000375218 IGLV1-50A0A075B6I6 118 aa5.89□□□□□ -1.47
UBR4-201ENST00000375218 NREPQ16612 68 aa5.89□□□□□ -1.47
UBR4-201ENST00000375218 J3QKU1 62 aa5.89□□□□□ -1.47
UBR4-201ENST00000375218 BRD3OSQ6XYD6 125 aa5.89□□□□□ -1.47
UBR4-201ENST00000375218 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
UBR4-201ENST00000375218 C2CD3Q4AC94 2353 aa5.88□□□□□ -1.47
UBR4-201ENST00000375218 LINC00167Q96N53 147 aa5.88□□□□□ -1.47
UBR4-201ENST00000375218 H3BPC8 53 aa5.88□□□□□ -1.47
UBR4-201ENST00000375218 Q8N9P0 234 aaPredicted RBP5.88□□□□□ -1.47
UBR4-201ENST00000375218 C14orf132Q9NPU4 83 aa5.88□□□□□ -1.47
UBR4-201ENST00000375218 SMR3AQ99954 134 aa5.88□□□□□ -1.47
UBR4-201ENST00000375218 RPP21Q9H633 154 aaKnown RBP5.88□□□□□ -1.47
UBR4-201ENST00000375218 PLNP26678 52 aa5.87□□□□□ -1.47
UBR4-201ENST00000375218 A0A087X002 238 aa5.87□□□□□ -1.47
UBR4-201ENST00000375218 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
UBR4-201ENST00000375218 TENM2Q9NT68 2774 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 KLHL30-AS1Q8NEE0 82 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 STAB1Q9NY15 2570 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 PKD1P98161 4303 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 IGLV11-55A0A075B6I3 123 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 TRAV12-1A0A0B4J245 112 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 UBL5Q9BZL1 73 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 A0A096LNJ9 63 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 G3V318 75 aa5.86□□□□□ -1.47
UBR4-201ENST00000375218 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
UBR4-201ENST00000375218 RNASE3P12724 160 aaKnown RBP5.85□□□□□ -1.47
UBR4-201ENST00000375218 C5orf56Q8N8D9 126 aa5.85□□□□□ -1.47
UBR4-201ENST00000375218 JMJD1CQ15652 2540 aa5.85□□□□□ -1.47
UBR4-201ENST00000375218 LY6EQ16553 131 aa5.85□□□□□ -1.47
UBR4-201ENST00000375218 CRIP1P50238 77 aa5.85□□□□□ -1.47
UBR4-201ENST00000375218 KRTAP10-3P60369 221 aa5.85□□□□□ -1.47
UBR4-201ENST00000375218 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.47
UBR4-201ENST00000375218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
UBR4-201ENST00000375218 IGFL4Q6B9Z1 124 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 ATRQ13535 2644 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 TRBV6-5A0A0K0K1A5 114 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 H3BQ85 93 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 CTSGP08311 255 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 A0A0J9YY99 117 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 C16orf74Q96GX8 76 aa5.83□□□□□ -1.48
UBR4-201ENST00000375218 HTN1P15515 57 aa5.82□□□□□ -1.48
UBR4-201ENST00000375218 DEFB1P60022 68 aa5.82□□□□□ -1.48
UBR4-201ENST00000375218 MUC7Q8TAX7 377 aa5.82□□□□□ -1.48
UBR4-201ENST00000375218 IGKV2-40A0A087WW87 121 aaPredicted RBP5.82□□□□□ -1.48
UBR4-201ENST00000375218 IGKV2D-40P01614 121 aaPredicted RBP5.82□□□□□ -1.48
UBR4-201ENST00000375218 A0A1W2PNM2 257 aa5.82□□□□□ -1.48
UBR4-201ENST00000375218 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
UBR4-201ENST00000375218 MGPP08493 103 aa5.81□□□□□ -1.48
UBR4-201ENST00000375218 RPL36ALQ969Q0 106 aaKnown RBP5.81□□□□□ -1.48
UBR4-201ENST00000375218 HIGD2AQ9BW72 106 aa5.8□□□□□ -1.48
UBR4-201ENST00000375218 I3L3M4 83 aa5.8□□□□□ -1.48
UBR4-201ENST00000375218 WNK1Q9H4A3 2382 aa5.8□□□□□ -1.48
UBR4-201ENST00000375218 A0A0J9YX75 114 aa5.79□□□□□ -1.48
UBR4-201ENST00000375218 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.79□□□□□ -1.48
UBR4-201ENST00000375218 F8VRH5 84 aa5.79□□□□□ -1.48
UBR4-201ENST00000375218 IGKV3-20P01619 116 aa5.79□□□□□ -1.48
UBR4-201ENST00000375218 Q86TA4 180 aa5.79□□□□□ -1.48
UBR4-201ENST00000375218 PKHD1P08F94 4074 aa5.79□□□□□ -1.48
UBR4-201ENST00000375218 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
UBR4-201ENST00000375218 DNAH8Q96JB1 4490 aa5.78□□□□□ -1.48
UBR4-201ENST00000375218 GAS8-AS1O95177 125 aa5.78□□□□□ -1.48
UBR4-201ENST00000375218 CCL19Q99731 98 aa5.78□□□□□ -1.48
UBR4-201ENST00000375218 RNF5Q99942 180 aa5.78□□□□□ -1.48
UBR4-201ENST00000375218 RTL8CO15255 209 aa5.77□□□□□ -1.48
UBR4-201ENST00000375218 HAMPP81172 84 aa5.77□□□□□ -1.48
UBR4-201ENST00000375218 PRR9Q5T870 116 aa5.77□□□□□ -1.48
UBR4-201ENST00000375218 Q8N3U1 123 aa5.77□□□□□ -1.48
UBR4-201ENST00000375218 DNAH11Q96DT5 4516 aa5.77□□□□□ -1.49
UBR4-201ENST00000375218 DEFB112Q30KQ8 113 aa5.77□□□□□ -1.49
UBR4-201ENST00000375218 KMT2CQ8NEZ4 4911 aaKnown RBP5.76□□□□□ -1.49
UBR4-201ENST00000375218 ALMS1Q8TCU4 4167 aa5.76□□□□□ -1.49
UBR4-201ENST00000375218 FAM74A4Q5TZK3 123 aa5.75□□□□□ -1.49
UBR4-201ENST00000375218 ZNF625Q96I27 306 aaPredicted RBP5.75□□□□□ -1.49
UBR4-201ENST00000375218 IGLV10-54A0A075B6I4 117 aa5.75□□□□□ -1.49
UBR4-201ENST00000375218 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
UBR4-201ENST00000375218 C14orf178Q8N769 122 aaPredicted RBP5.75□□□□□ -1.49
UBR4-201ENST00000375218 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
UBR4-201ENST00000375218 DNAH17Q9UFH2 4485 aa5.75□□□□□ -1.49
UBR4-201ENST00000375218 Q8N1X5 172 aa5.75□□□□□ -1.49
UBR4-201ENST00000375218 MINOS1Q5TGZ0 78 aa5.74□□□□□ -1.49
UBR4-201ENST00000375218 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
UBR4-201ENST00000375218 SPINK7P58062 85 aa5.74□□□□□ -1.49
UBR4-201ENST00000375218 TMEM190Q8WZ59 177 aa5.74□□□□□ -1.49
UBR4-201ENST00000375218 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
UBR4-201ENST00000375218 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
UBR4-201ENST00000375218 H3BRN7 92 aa5.73□□□□□ -1.49
UBR4-201ENST00000375218 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
UBR4-201ENST00000375218 H3BUX3 64 aa5.73□□□□□ -1.49
UBR4-201ENST00000375218 GFRA4Q9GZZ7 299 aa5.72□□□□□ -1.49
UBR4-201ENST00000375218 PDE6HQ13956 83 aa5.72□□□□□ -1.49
UBR4-201ENST00000375218 TMEM14CQ9P0S9 112 aa5.72□□□□□ -1.49
UBR4-201ENST00000375218 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
UBR4-201ENST00000375218 IGLV2-18A0A075B6J9 118 aa5.71□□□□□ -1.5
UBR4-201ENST00000375218 ELOF1P60002 83 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms