RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
TRAPPC3-204ENST00000373166 SPRR4Q96PI1 79 aa11.15□□□□□ -0.62
TRAPPC3-204ENST00000373166 LITAFQ99732 161 aa11.15□□□□□ -0.62
TRAPPC3-204ENST00000373166 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.62
TRAPPC3-204ENST00000373166 EIF4EBP3O60516 100 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC3-204ENST00000373166 IGLV6-57P01721 117 aa11.14□□□□□ -0.63
TRAPPC3-204ENST00000373166 LINC00308Q8TCZ7 52 aa11.14□□□□□ -0.63
TRAPPC3-204ENST00000373166 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
TRAPPC3-204ENST00000373166 ATOH7Q8N100 152 aa11.13□□□□□ -0.63
TRAPPC3-204ENST00000373166 SPANXCQ9NY87 97 aa11.13□□□□□ -0.63
TRAPPC3-204ENST00000373166 TRAV23DV6A0A075B6W5 121 aa11.12□□□□□ -0.63
TRAPPC3-204ENST00000373166 B5MCH6 92 aa11.12□□□□□ -0.63
TRAPPC3-204ENST00000373166 S100A2P29034 98 aa11.12□□□□□ -0.63
TRAPPC3-204ENST00000373166 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
TRAPPC3-204ENST00000373166 TPRXLQ17RH7 258 aa11.11□□□□□ -0.63
TRAPPC3-204ENST00000373166 SCGB1D4Q6XE38 83 aa11.11□□□□□ -0.63
TRAPPC3-204ENST00000373166 LINC00304Q8N9R0 145 aa11.11□□□□□ -0.63
TRAPPC3-204ENST00000373166 CBY1Q9Y3M2 126 aa11.11□□□□□ -0.63
TRAPPC3-204ENST00000373166 ANKRD39Q53RE8 183 aa11.1□□□□□ -0.63
TRAPPC3-204ENST00000373166 Q6ZRX8 168 aa11.1□□□□□ -0.63
TRAPPC3-204ENST00000373166 HIST3H2BBQ8N257 126 aa11.1□□□□□ -0.63
TRAPPC3-204ENST00000373166 S100A6P06703 90 aa11.09□□□□□ -0.63
TRAPPC3-204ENST00000373166 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
TRAPPC3-204ENST00000373166 C3orf22Q8N5N4 141 aa11.08□□□□□ -0.64
TRAPPC3-204ENST00000373166 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
TRAPPC3-204ENST00000373166 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC3-204ENST00000373166 JOSD1Q15040 202 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC3-204ENST00000373166 OR13C6PQ8NH95 151 aa11.07□□□□□ -0.64
TRAPPC3-204ENST00000373166 SNRPEP62304 92 aaKnown RBP11.06□□□□□ -0.64
TRAPPC3-204ENST00000373166 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
TRAPPC3-204ENST00000373166 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
TRAPPC3-204ENST00000373166 Q9BRP9 147 aa11.05□□□□□ -0.64
TRAPPC3-204ENST00000373166 PPDPFQ9H3Y8 114 aa11.05□□□□□ -0.64
TRAPPC3-204ENST00000373166 HINT1P49773 126 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC3-204ENST00000373166 ERC2-IT1O76042 136 aa11.03□□□□□ -0.64
TRAPPC3-204ENST00000373166 CTAG1AP78358 180 aa11.03□□□□□ -0.64
TRAPPC3-204ENST00000373166 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
TRAPPC3-204ENST00000373166 GAGE2AQ6NT46 116 aa11.03□□□□□ -0.64
TRAPPC3-204ENST00000373166 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
TRAPPC3-204ENST00000373166 LINC00518Q8N0U6 118 aa11.03□□□□□ -0.64
TRAPPC3-204ENST00000373166 HSBP1L1C9JCN9 74 aa11.01□□□□□ -0.65
TRAPPC3-204ENST00000373166 IFITM1P13164 125 aa11.01□□□□□ -0.65
TRAPPC3-204ENST00000373166 Q6ZVH6 145 aa11.01□□□□□ -0.65
TRAPPC3-204ENST00000373166 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
TRAPPC3-204ENST00000373166 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
TRAPPC3-204ENST00000373166 Q8NBF4 154 aa10.97□□□□□ -0.65
TRAPPC3-204ENST00000373166 FSIP2Q5CZC0 6907 aa10.95□□□□□ -0.66
TRAPPC3-204ENST00000373166 IGLV9-49A0A0B4J1Y8 123 aa10.95□□□□□ -0.66
TRAPPC3-204ENST00000373166 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
TRAPPC3-204ENST00000373166 DHRS4-AS1Q9P1J3 65 aa10.95□□□□□ -0.66
TRAPPC3-204ENST00000373166 MOBPQ13875 183 aa10.94□□□□□ -0.66
TRAPPC3-204ENST00000373166 C6orf99Q4VX62 202 aa10.94□□□□□ -0.66
TRAPPC3-204ENST00000373166 C5orf52A6NGY3 159 aa10.93□□□□□ -0.66
TRAPPC3-204ENST00000373166 COX7BP24311 80 aa10.93□□□□□ -0.66
TRAPPC3-204ENST00000373166 LINC01547P58512 204 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC3-204ENST00000373166 A6NDN8 102 aa10.92□□□□□ -0.66
TRAPPC3-204ENST00000373166 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
TRAPPC3-204ENST00000373166 ELOF1P60002 83 aaKnown RBP10.92□□□□□ -0.66
TRAPPC3-204ENST00000373166 ST20-AS1Q8NBB2 130 aa10.92□□□□□ -0.66
TRAPPC3-204ENST00000373166 C9orf153Q5TBE3 101 aa10.89□□□□□ -0.67
TRAPPC3-204ENST00000373166 SSBP3-AS1Q7Z2R9 100 aa10.89□□□□□ -0.67
TRAPPC3-204ENST00000373166 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
TRAPPC3-204ENST00000373166 TRBV7-6A0A0J9YX20 115 aa10.88□□□□□ -0.67
TRAPPC3-204ENST00000373166 SPINK1P00995 79 aa10.88□□□□□ -0.67
TRAPPC3-204ENST00000373166 FP248Q71RG6 208 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-204ENST00000373166 SLC25A34Q6PIV7 304 aa10.87□□□□□ -0.67
TRAPPC3-204ENST00000373166 A0A1B0GWB2 263 aa10.86□□□□□ -0.67
TRAPPC3-204ENST00000373166 ASB16-AS1Q495Z4 193 aa10.86□□□□□ -0.67
TRAPPC3-204ENST00000373166 CRCT1Q9UGL9 99 aa10.85□□□□□ -0.67
TRAPPC3-204ENST00000373166 SPRR1BP22528 89 aa10.84□□□□□ -0.67
TRAPPC3-204ENST00000373166 RPS29P62273 56 aaKnown RBP10.82□□□□□ -0.68
TRAPPC3-204ENST00000373166 KRTAP13-3Q3SY46 172 aa10.82□□□□□ -0.68
TRAPPC3-204ENST00000373166 A4D1N5 150 aa10.81□□□□□ -0.68
TRAPPC3-204ENST00000373166 COX8AP10176 69 aa10.81□□□□□ -0.68
TRAPPC3-204ENST00000373166 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
TRAPPC3-204ENST00000373166 TAL2Q16559 108 aa10.8□□□□□ -0.68
TRAPPC3-204ENST00000373166 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
TRAPPC3-204ENST00000373166 SEC61BP60468 96 aaKnown RBP10.79□□□□□ -0.68
TRAPPC3-204ENST00000373166 DEFB105AQ8NG35 78 aa10.79□□□□□ -0.68
TRAPPC3-204ENST00000373166 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
TRAPPC3-204ENST00000373166 NHP2Q9NX24 153 aaKnown RBP10.78□□□□□ -0.68
TRAPPC3-204ENST00000373166 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.69
TRAPPC3-204ENST00000373166 KRTAP4-1Q9BYQ7 146 aa10.77□□□□□ -0.69
TRAPPC3-204ENST00000373166 DLEU1O43261 78 aa10.76□□□□□ -0.69
TRAPPC3-204ENST00000373166 VAMP3Q15836 100 aa10.76□□□□□ -0.69
TRAPPC3-204ENST00000373166 SLC25A20O43772 301 aa10.75□□□□□ -0.69
TRAPPC3-204ENST00000373166 Q1RN00 199 aa10.75□□□□□ -0.69
TRAPPC3-204ENST00000373166 Q8N377 158 aa10.75□□□□□ -0.69
TRAPPC3-204ENST00000373166 PAM16Q9Y3D7 125 aa10.75□□□□□ -0.69
TRAPPC3-204ENST00000373166 SPATA45Q537H7 98 aa10.74□□□□□ -0.69
TRAPPC3-204ENST00000373166 VAMP8Q9BV40 100 aa10.74□□□□□ -0.69
TRAPPC3-204ENST00000373166 C12orf57Q99622 126 aa10.73□□□□□ -0.69
TRAPPC3-204ENST00000373166 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
TRAPPC3-204ENST00000373166 C14orf144Q96I85 54 aa10.72□□□□□ -0.69
TRAPPC3-204ENST00000373166 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
TRAPPC3-204ENST00000373166 LIMD2Q9BT23 127 aa10.69□□□□□ -0.7
TRAPPC3-204ENST00000373166 PRO1933Q9H354 126 aa10.69□□□□□ -0.7
TRAPPC3-204ENST00000373166 HIGD1BQ9P298 99 aa10.68□□□□□ -0.7
TRAPPC3-204ENST00000373166 LINC00575Q6W349 94 aa10.67□□□□□ -0.7
TRAPPC3-204ENST00000373166 SMIM29Q86T20 159 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms