RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 NOTCH1P46531 2555 aa8.02□□□□□ -1.12
PTPN1-201ENST00000371621 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
PTPN1-201ENST00000371621 A0A096LNT2 108 aa8.01□□□□□ -1.13
PTPN1-201ENST00000371621 LY6G6DO95868 133 aa8.01□□□□□ -1.13
PTPN1-201ENST00000371621 Q6ZRP5 223 aa8.01□□□□□ -1.13
PTPN1-201ENST00000371621 FLNCQ14315 2725 aa8.01□□□□□ -1.13
PTPN1-201ENST00000371621 ATRQ13535 2644 aa8.01□□□□□ -1.13
PTPN1-201ENST00000371621 K7EQZ3 153 aa8□□□□□ -1.13
PTPN1-201ENST00000371621 UTP20O75691 2785 aaKnown RBP8□□□□□ -1.13
PTPN1-201ENST00000371621 ERC2-IT1O76042 136 aa8□□□□□ -1.13
PTPN1-201ENST00000371621 Q6YL49 198 aa8□□□□□ -1.13
PTPN1-201ENST00000371621 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.99□□□□□ -1.13
PTPN1-201ENST00000371621 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
PTPN1-201ENST00000371621 ST20-AS1Q8NBB2 130 aa7.99□□□□□ -1.13
PTPN1-201ENST00000371621 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
PTPN1-201ENST00000371621 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
PTPN1-201ENST00000371621 A0A1W2PNN7 141 aa7.98□□□□□ -1.13
PTPN1-201ENST00000371621 A0A1B0GUV1 79 aa7.97□□□□□ -1.13
PTPN1-201ENST00000371621 H3BS24 57 aa7.97□□□□□ -1.13
PTPN1-201ENST00000371621 DHRS4-AS1Q9P1J3 65 aa7.97□□□□□ -1.13
PTPN1-201ENST00000371621 OCR1Q9BZK8 76 aa7.96□□□□□ -1.13
PTPN1-201ENST00000371621 HRNRQ86YZ3 2850 aaPredicted RBP7.96□□□□□ -1.14
PTPN1-201ENST00000371621 Q6ZRU5 148 aa7.96□□□□□ -1.14
PTPN1-201ENST00000371621 FASNP49327 2511 aaKnown RBP7.95□□□□□ -1.14
PTPN1-201ENST00000371621 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
PTPN1-201ENST00000371621 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
PTPN1-201ENST00000371621 CSMD2Q7Z408 3487 aa7.95□□□□□ -1.14
PTPN1-201ENST00000371621 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
PTPN1-201ENST00000371621 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
PTPN1-201ENST00000371621 Q6ZTC4 211 aa7.94□□□□□ -1.14
PTPN1-201ENST00000371621 BAHCC1Q9P281 2608 aa7.93□□□□□ -1.14
PTPN1-201ENST00000371621 HELZ2Q9BYK8 2649 aaKnown RBP7.93□□□□□ -1.14
PTPN1-201ENST00000371621 C11orf45Q8TAV5 145 aa7.93□□□□□ -1.14
PTPN1-201ENST00000371621 Q1T7F1 81 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 CFAP46Q8IYW2 2715 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 A8MU10 97 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 EGFEM1PQ0D2K5 195 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 C9orf66Q5T8R8 295 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 C7orf65Q6ZTY9 151 aa7.92□□□□□ -1.14
PTPN1-201ENST00000371621 CELSR2Q9HCU4 2923 aa7.91□□□□□ -1.14
PTPN1-201ENST00000371621 IGLV6-57P01721 117 aa7.91□□□□□ -1.14
PTPN1-201ENST00000371621 LELP1Q5T871 98 aa7.91□□□□□ -1.14
PTPN1-201ENST00000371621 COA5Q86WW8 74 aa7.91□□□□□ -1.14
PTPN1-201ENST00000371621 ZANQ9Y493 2812 aa7.91□□□□□ -1.14
PTPN1-201ENST00000371621 COL6A5A8TX70 2615 aa7.9□□□□□ -1.14
PTPN1-201ENST00000371621 ZFHX3Q15911 3703 aa7.9□□□□□ -1.14
PTPN1-201ENST00000371621 KLK9Q2XQG4 91 aa7.9□□□□□ -1.14
PTPN1-201ENST00000371621 Q8NBF4 154 aa7.89□□□□□ -1.15
PTPN1-201ENST00000371621 LINC00167Q96N53 147 aa7.89□□□□□ -1.15
PTPN1-201ENST00000371621 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
PTPN1-201ENST00000371621 UBE2DNLQ8IWF7 75 aa7.89□□□□□ -1.15
PTPN1-201ENST00000371621 PRAC1Q96KF2 57 aa7.89□□□□□ -1.15
PTPN1-201ENST00000371621 C16orf90A8MZG2 172 aa7.89□□□□□ -1.15
PTPN1-201ENST00000371621 PRLHP81277 87 aa7.88□□□□□ -1.15
PTPN1-201ENST00000371621 LCA10Q71F78 164 aa7.88□□□□□ -1.15
PTPN1-201ENST00000371621 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
PTPN1-201ENST00000371621 C7orf33Q8WU49 177 aa7.87□□□□□ -1.15
PTPN1-201ENST00000371621 IGSF10Q6WRI0 2623 aa7.87□□□□□ -1.15
PTPN1-201ENST00000371621 IGLV8-61A0A075B6I0 122 aa7.87□□□□□ -1.15
PTPN1-201ENST00000371621 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
PTPN1-201ENST00000371621 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
PTPN1-201ENST00000371621 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
PTPN1-201ENST00000371621 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
PTPN1-201ENST00000371621 Q8NDZ9 215 aa7.86□□□□□ -1.15
PTPN1-201ENST00000371621 DEFB113Q30KQ7 82 aa7.85□□□□□ -1.15
PTPN1-201ENST00000371621 ITPR3Q14573 2671 aa7.85□□□□□ -1.15
PTPN1-201ENST00000371621 RETNLBQ9BQ08 111 aa7.85□□□□□ -1.15
PTPN1-201ENST00000371621 IGLV1-51P01701 117 aa7.84□□□□□ -1.15
PTPN1-201ENST00000371621 Q5VV11 94 aa7.83□□□□□ -1.16
PTPN1-201ENST00000371621 FLNAP21333 2647 aaKnown RBP7.83□□□□□ -1.16
PTPN1-201ENST00000371621 LINC00476Q8WZB0 136 aa7.83□□□□□ -1.16
PTPN1-201ENST00000371621 APCP25054 2843 aa7.83□□□□□ -1.16
PTPN1-201ENST00000371621 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
PTPN1-201ENST00000371621 Q8N377 158 aa7.83□□□□□ -1.16
PTPN1-201ENST00000371621 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
PTPN1-201ENST00000371621 Q9BRP9 147 aa7.82□□□□□ -1.16
PTPN1-201ENST00000371621 VPREB1P12018 145 aa7.82□□□□□ -1.16
PTPN1-201ENST00000371621 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
PTPN1-201ENST00000371621 A0A1W2PNM2 257 aa7.81□□□□□ -1.16
PTPN1-201ENST00000371621 SPINK1P00995 79 aa7.81□□□□□ -1.16
PTPN1-201ENST00000371621 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
PTPN1-201ENST00000371621 HECTD1Q9ULT8 2610 aa7.79□□□□□ -1.16
PTPN1-201ENST00000371621 A0A1B0GU69 56 aa7.78□□□□□ -1.16
PTPN1-201ENST00000371621 REG3GQ6UW15 175 aa7.78□□□□□ -1.16
PTPN1-201ENST00000371621 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
PTPN1-201ENST00000371621 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.17
PTPN1-201ENST00000371621 MAST4O15021 2626 aa7.77□□□□□ -1.17
PTPN1-201ENST00000371621 DEFB131BA0A096LNP1 70 aa7.76□□□□□ -1.17
PTPN1-201ENST00000371621 Q6ZRX8 168 aa7.76□□□□□ -1.17
PTPN1-201ENST00000371621 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
PTPN1-201ENST00000371621 LINC00612Q8N6U2 182 aa7.76□□□□□ -1.17
PTPN1-201ENST00000371621 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
PTPN1-201ENST00000371621 FBN2P35556 2912 aa7.76□□□□□ -1.17
PTPN1-201ENST00000371621 ZNF706Q9Y5V0 76 aaPredicted RBP7.75□□□□□ -1.17
PTPN1-201ENST00000371621 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
PTPN1-201ENST00000371621 TEP1Q99973 2627 aaKnown RBP7.74□□□□□ -1.17
PTPN1-201ENST00000371621 NF1P21359 2839 aa7.74□□□□□ -1.17
PTPN1-201ENST00000371621 DSCR10P59022 87 aa7.74□□□□□ -1.17
PTPN1-201ENST00000371621 PRR26Q8N8Z3 221 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms