RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 DIRC1Q969H9 104 aa15.07■□□□□ 0
SNX3-203ENST00000368979 EPM2AB3EWF7 344 aa15.07■□□□□ 0
SNX3-203ENST00000368979 RPL37AP8A6NKH3 93 aa15.06■□□□□ 0
SNX3-203ENST00000368979 PRYO14603 147 aa15.04■□□□□ -0
SNX3-203ENST00000368979 TRBV7-6A0A0J9YX20 115 aa15.02■□□□□ -0
SNX3-203ENST00000368979 A0A087WYN8 130 aa15.02□□□□□ -0.01
SNX3-203ENST00000368979 PHF5AQ7RTV0 110 aaKnown RBP15.02□□□□□ -0.01
SNX3-203ENST00000368979 DPH3Q96FX2 82 aa15.02□□□□□ -0.01
SNX3-203ENST00000368979 TRACP01848 142 aa15.01□□□□□ -0.01
SNX3-203ENST00000368979 SPRR1AP35321 89 aa15.01□□□□□ -0.01
SNX3-203ENST00000368979 PRO0461Q9UI25 63 aa15.01□□□□□ -0.01
SNX3-203ENST00000368979 DNAH5Q8TE73 4624 aa15□□□□□ -0.01
SNX3-203ENST00000368979 ELOF1P60002 83 aaKnown RBP15□□□□□ -0.01
SNX3-203ENST00000368979 PKD1P98161 4303 aa14.99□□□□□ -0.01
SNX3-203ENST00000368979 COX7BP24311 80 aa14.98□□□□□ -0.01
SNX3-203ENST00000368979 MTURNQ8N3F0 131 aa14.98□□□□□ -0.01
SNX3-203ENST00000368979 PLAC8Q9NZF1 115 aa14.98□□□□□ -0.01
SNX3-203ENST00000368979 A0A1B0GX51 115 aa14.97□□□□□ -0.01
SNX3-203ENST00000368979 KRTAP4-16G5E9R7 235 aaPredicted RBP14.97□□□□□ -0.01
SNX3-203ENST00000368979 LINC00575Q6W349 94 aa14.97□□□□□ -0.01
SNX3-203ENST00000368979 C9JAW5 83 aa14.97□□□□□ -0.01
SNX3-203ENST00000368979 A0A1B0GVY2 172 aa14.95□□□□□ -0.02
SNX3-203ENST00000368979 F8W1H4 67 aa14.95□□□□□ -0.02
SNX3-203ENST00000368979 KRTAP10-1P60331 282 aa14.95□□□□□ -0.02
SNX3-203ENST00000368979 REG3GQ6UW15 175 aa14.95□□□□□ -0.02
SNX3-203ENST00000368979 KRTAP11-1Q8IUC1 163 aa14.94□□□□□ -0.02
SNX3-203ENST00000368979 LINC00528Q8N1L1 170 aa14.94□□□□□ -0.02
SNX3-203ENST00000368979 SMCPP49901 116 aaPredicted RBP14.93□□□□□ -0.02
SNX3-203ENST00000368979 UBE2BP63146 152 aa14.93□□□□□ -0.02
SNX3-203ENST00000368979 Q6ZSA8 131 aa14.93□□□□□ -0.02
SNX3-203ENST00000368979 EPPK1P58107 5090 aaKnown RBP14.93□□□□□ -0.02
SNX3-203ENST00000368979 FAM30AQ9NZY2 134 aa14.92□□□□□ -0.02
SNX3-203ENST00000368979 SLC25A20O43772 301 aa14.92□□□□□ -0.02
SNX3-203ENST00000368979 B5MCH6 92 aa14.91□□□□□ -0.02
SNX3-203ENST00000368979 ETDCA0A1B0GVM5 59 aa14.9□□□□□ -0.02
SNX3-203ENST00000368979 DNAL4O96015 105 aa14.9□□□□□ -0.02
SNX3-203ENST00000368979 hADV29S1A0JD25 119 aa14.89□□□□□ -0.03
SNX3-203ENST00000368979 Q6ZRX8 168 aa14.89□□□□□ -0.03
SNX3-203ENST00000368979 LINC01600Q96MT4 127 aa14.88□□□□□ -0.03
SNX3-203ENST00000368979 DNAH8Q96JB1 4490 aa14.87□□□□□ -0.03
SNX3-203ENST00000368979 H3BT86 120 aa14.87□□□□□ -0.03
SNX3-203ENST00000368979 SNCGO76070 127 aa14.87□□□□□ -0.03
SNX3-203ENST00000368979 ANKRD29Q8N6D5 301 aa14.86□□□□□ -0.03
SNX3-203ENST00000368979 INAFM2P0DMQ5 153 aa14.84□□□□□ -0.03
SNX3-203ENST00000368979 CIRBP-AS1Q8TBR5 109 aa14.84□□□□□ -0.03
SNX3-203ENST00000368979 BIRC6Q9NR09 4857 aa14.83□□□□□ -0.04
SNX3-203ENST00000368979 SCXQ7RTU7 201 aa14.82□□□□□ -0.04
SNX3-203ENST00000368979 Q9BRP9 147 aa14.82□□□□□ -0.04
SNX3-203ENST00000368979 BAALC-AS2P0C853 105 aa14.82□□□□□ -0.04
SNX3-203ENST00000368979 ORMDL1Q9P0S3 153 aa14.82□□□□□ -0.04
SNX3-203ENST00000368979 DHRS4-AS1Q9P1J3 65 aa14.82□□□□□ -0.04
SNX3-203ENST00000368979 FAM19A1Q7Z5A9 133 aa14.81□□□□□ -0.04
SNX3-203ENST00000368979 Q6ZQY7 126 aa14.8□□□□□ -0.04
SNX3-203ENST00000368979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.79□□□□□ -0.04
SNX3-203ENST00000368979 BCE1O60756 84 aa14.78□□□□□ -0.04
SNX3-203ENST00000368979 PRLHP81277 87 aa14.77□□□□□ -0.04
SNX3-203ENST00000368979 ETDBQ3ZM63 59 aa14.77□□□□□ -0.04
SNX3-203ENST00000368979 H0Y9J4 135 aa14.76□□□□□ -0.05
SNX3-203ENST00000368979 SMCR5Q8TEV8 140 aa14.76□□□□□ -0.05
SNX3-203ENST00000368979 TEN1Q86WV5 123 aa14.75□□□□□ -0.05
SNX3-203ENST00000368979 PSORS1C2Q9UIG4 136 aa14.75□□□□□ -0.05
SNX3-203ENST00000368979 HAMPP81172 84 aa14.73□□□□□ -0.05
SNX3-203ENST00000368979 KRTAP13-1Q8IUC0 172 aa14.73□□□□□ -0.05
SNX3-203ENST00000368979 OCIAD2Q56VL3 154 aa14.72□□□□□ -0.05
SNX3-203ENST00000368979 TMEM256-PLSCR3K7ERE1 68 aa14.71□□□□□ -0.05
SNX3-203ENST00000368979 ERC2-IT1O76042 136 aa14.71□□□□□ -0.05
SNX3-203ENST00000368979 UBE2AP49459 152 aa14.71□□□□□ -0.06
SNX3-203ENST00000368979 H3BQ85 93 aa14.69□□□□□ -0.06
SNX3-203ENST00000368979 HIGD2AQ9BW72 106 aa14.68□□□□□ -0.06
SNX3-203ENST00000368979 GHRHP01286 108 aa14.67□□□□□ -0.06
SNX3-203ENST00000368979 C1orf137Q5JT78 98 aa14.67□□□□□ -0.06
SNX3-203ENST00000368979 LRP1BQ9NZR2 4599 aa14.67□□□□□ -0.06
SNX3-203ENST00000368979 DYNC1H1Q14204 4646 aaKnown RBP14.67□□□□□ -0.06
SNX3-203ENST00000368979 LINC01547P58512 204 aaPredicted RBP14.66□□□□□ -0.06
SNX3-203ENST00000368979 PKHD1P08F94 4074 aa14.65□□□□□ -0.06
SNX3-203ENST00000368979 ST20-AS1Q8NBB2 130 aa14.65□□□□□ -0.06
SNX3-203ENST00000368979 IGLV5-48A0A075B6I7 105 aa14.64□□□□□ -0.07
SNX3-203ENST00000368979 TEX49A0A1B0GTD5 131 aa14.64□□□□□ -0.07
SNX3-203ENST00000368979 PPDPFLQ8WWR9 84 aa14.63□□□□□ -0.07
SNX3-203ENST00000368979 Q8N377 158 aa14.61□□□□□ -0.07
SNX3-203ENST00000368979 OBSCN-AS1Q96MR7 158 aa14.61□□□□□ -0.07
SNX3-203ENST00000368979 XGP55808 180 aa14.6□□□□□ -0.07
SNX3-203ENST00000368979 DEFB105AQ8NG35 78 aa14.6□□□□□ -0.07
SNX3-203ENST00000368979 ZNF861PO60384 105 aa14.58□□□□□ -0.08
SNX3-203ENST00000368979 IGLV7-43P04211 117 aa14.58□□□□□ -0.08
SNX3-203ENST00000368979 JMJD7-PLA2G4BH0Y9G9 81 aa14.56□□□□□ -0.08
SNX3-203ENST00000368979 LAMTOR3Q9UHA4 124 aa14.56□□□□□ -0.08
SNX3-203ENST00000368979 NDUFV3P56181 108 aaKnown RBP14.54□□□□□ -0.08
SNX3-203ENST00000368979 A0A1B0GV72 72 aa14.52□□□□□ -0.08
SNX3-203ENST00000368979 SPRR1BP22528 89 aa14.51□□□□□ -0.09
SNX3-203ENST00000368979 C14orf132Q9NPU4 83 aa14.5□□□□□ -0.09
SNX3-203ENST00000368979 APOBP04114 4563 aaKnown RBP14.49□□□□□ -0.09
SNX3-203ENST00000368979 K7ERU9 68 aa14.49□□□□□ -0.09
SNX3-203ENST00000368979 SMIM29Q86T20 159 aa14.49□□□□□ -0.09
SNX3-203ENST00000368979 C3orf22Q8N5N4 141 aa14.49□□□□□ -0.09
SNX3-203ENST00000368979 RBM3P98179 157 aaKnown RBP14.48□□□□□ -0.09
SNX3-203ENST00000368979 J3QR89 54 aa14.47□□□□□ -0.09
SNX3-203ENST00000368979 GAGE2AQ6NT46 116 aa14.46□□□□□ -0.09
SNX3-203ENST00000368979 SPRR4Q96PI1 79 aa14.46□□□□□ -0.09
SNX3-203ENST00000368979 ZNF706Q9Y5V0 76 aaPredicted RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms