RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SPART-AS1P0CW21 52 aa8.99□□□□□ -0.97
PRKN-205ENST00000366897 NREPQ16612 68 aa8.99□□□□□ -0.97
PRKN-205ENST00000366897 TENM3Q9P273 2699 aa8.98□□□□□ -0.97
PRKN-205ENST00000366897 APOC4P55056 127 aa8.98□□□□□ -0.97
PRKN-205ENST00000366897 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
PRKN-205ENST00000366897 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
PRKN-205ENST00000366897 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
PRKN-205ENST00000366897 MIFP14174 115 aa8.96□□□□□ -0.97
PRKN-205ENST00000366897 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
PRKN-205ENST00000366897 RETNQ9HD89 108 aa8.95□□□□□ -0.98
PRKN-205ENST00000366897 EPM2AB3EWF7 344 aa8.94□□□□□ -0.98
PRKN-205ENST00000366897 BCE1O60756 84 aa8.94□□□□□ -0.98
PRKN-205ENST00000366897 TMEM254Q8TBM7 123 aa8.94□□□□□ -0.98
PRKN-205ENST00000366897 Q6ZRP5 223 aa8.94□□□□□ -0.98
PRKN-205ENST00000366897 M0R378 163 aa8.94□□□□□ -0.98
PRKN-205ENST00000366897 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
PRKN-205ENST00000366897 TRBV7-6A0A0J9YX20 115 aa8.93□□□□□ -0.98
PRKN-205ENST00000366897 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
PRKN-205ENST00000366897 WIPF1O43516 503 aa8.92□□□□□ -0.98
PRKN-205ENST00000366897 EGFEM1PQ0D2K5 195 aa8.91□□□□□ -0.98
PRKN-205ENST00000366897 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
PRKN-205ENST00000366897 KPRPQ5T749 579 aaPredicted RBP8.91□□□□□ -0.98
PRKN-205ENST00000366897 KRTAP26-1Q6PEX3 210 aa8.91□□□□□ -0.98
PRKN-205ENST00000366897 IGKV2D-24A0A075B6R9 120 aa8.9□□□□□ -0.98
PRKN-205ENST00000366897 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.99
PRKN-205ENST00000366897 H3BQ85 93 aa8.9□□□□□ -0.99
PRKN-205ENST00000366897 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.99
PRKN-205ENST00000366897 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.99
PRKN-205ENST00000366897 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
PRKN-205ENST00000366897 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
PRKN-205ENST00000366897 Q6ZTC4 211 aa8.88□□□□□ -0.99
PRKN-205ENST00000366897 Q8N377 158 aa8.88□□□□□ -0.99
PRKN-205ENST00000366897 NOTCH1P46531 2555 aa8.87□□□□□ -0.99
PRKN-205ENST00000366897 MEGF8Q7Z7M0 2845 aa8.87□□□□□ -0.99
PRKN-205ENST00000366897 CMYA5Q8N3K9 4069 aa8.87□□□□□ -0.99
PRKN-205ENST00000366897 OCR1Q9BZK8 76 aa8.87□□□□□ -0.99
PRKN-205ENST00000366897 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
PRKN-205ENST00000366897 ESRGQ1W209 222 aa8.86□□□□□ -0.99
PRKN-205ENST00000366897 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
PRKN-205ENST00000366897 C1orf43Q9BWL3 253 aa8.86□□□□□ -0.99
PRKN-205ENST00000366897 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
PRKN-205ENST00000366897 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
PRKN-205ENST00000366897 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
PRKN-205ENST00000366897 PRYO14603 147 aa8.85□□□□□ -0.99
PRKN-205ENST00000366897 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
PRKN-205ENST00000366897 NDUFC1O43677 76 aa8.84□□□□□ -0.99
PRKN-205ENST00000366897 SYCNQ0VAF6 134 aa8.83□□□□□ -1
PRKN-205ENST00000366897 A0A0G2JQZ4 141 aa8.83□□□□□ -1
PRKN-205ENST00000366897 A0A0U1RQV1 116 aa8.83□□□□□ -1
PRKN-205ENST00000366897 A0A1W2PNN7 141 aa8.83□□□□□ -1
PRKN-205ENST00000366897 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
PRKN-205ENST00000366897 PKIGQ9Y2B9 76 aa8.83□□□□□ -1
PRKN-205ENST00000366897 A0A1W2PNM2 257 aa8.82□□□□□ -1
PRKN-205ENST00000366897 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
PRKN-205ENST00000366897 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
PRKN-205ENST00000366897 BRK1Q8WUW1 75 aa8.82□□□□□ -1
PRKN-205ENST00000366897 PRO0628Q9UI54 55 aa8.81□□□□□ -1
PRKN-205ENST00000366897 Q9BRP9 147 aa8.81□□□□□ -1
PRKN-205ENST00000366897 CASC10Q5T4H9 136 aa8.79□□□□□ -1
PRKN-205ENST00000366897 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
PRKN-205ENST00000366897 ERC2-IT1O76042 136 aa8.79□□□□□ -1
PRKN-205ENST00000366897 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
PRKN-205ENST00000366897 C1orf137Q5JT78 98 aa8.78□□□□□ -1
PRKN-205ENST00000366897 MRAPQ8TCY5 172 aa8.78□□□□□ -1
PRKN-205ENST00000366897 IGLV5-48A0A075B6I7 105 aa8.77□□□□□ -1.01
PRKN-205ENST00000366897 PRR4Q16378 134 aa8.77□□□□□ -1.01
PRKN-205ENST00000366897 F8WDY8 70 aa8.76□□□□□ -1.01
PRKN-205ENST00000366897 DEFB116Q30KQ4 102 aa8.76□□□□□ -1.01
PRKN-205ENST00000366897 ATP5EP56381 51 aaPredicted RBP8.76□□□□□ -1.01
PRKN-205ENST00000366897 Q6ZRX8 168 aa8.76□□□□□ -1.01
PRKN-205ENST00000366897 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
PRKN-205ENST00000366897 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
PRKN-205ENST00000366897 K7EQZ3 153 aa8.75□□□□□ -1.01
PRKN-205ENST00000366897 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
PRKN-205ENST00000366897 DEFB131BA0A096LNP1 70 aa8.73□□□□□ -1.01
PRKN-205ENST00000366897 DSCR10P59022 87 aa8.73□□□□□ -1.01
PRKN-205ENST00000366897 UBE2BP63146 152 aa8.73□□□□□ -1.01
PRKN-205ENST00000366897 KRTAP10-11P60412 298 aa8.72□□□□□ -1.01
PRKN-205ENST00000366897 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
PRKN-205ENST00000366897 TGP01266 2768 aa8.72□□□□□ -1.01
PRKN-205ENST00000366897 Q8NBF4 154 aa8.71□□□□□ -1.01
PRKN-205ENST00000366897 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.02
PRKN-205ENST00000366897 PRKDCP78527 4128 aaKnown RBP8.71□□□□□ -1.02
PRKN-205ENST00000366897 IGLV1-50A0A075B6I6 118 aa8.71□□□□□ -1.02
PRKN-205ENST00000366897 TNP2Q05952 138 aa8.71□□□□□ -1.02
PRKN-205ENST00000366897 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
PRKN-205ENST00000366897 SEC61GP60059 68 aa8.7□□□□□ -1.02
PRKN-205ENST00000366897 H3BNG1 76 aa8.68□□□□□ -1.02
PRKN-205ENST00000366897 CSMD3Q7Z407 3707 aa8.68□□□□□ -1.02
PRKN-205ENST00000366897 WFDC13Q8IUB5 93 aa8.67□□□□□ -1.02
PRKN-205ENST00000366897 C1orf64Q8NEQ6 169 aa8.67□□□□□ -1.02
PRKN-205ENST00000366897 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
PRKN-205ENST00000366897 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
PRKN-205ENST00000366897 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
PRKN-205ENST00000366897 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
PRKN-205ENST00000366897 hDV103S1A0JD37 113 aa8.65□□□□□ -1.03
PRKN-205ENST00000366897 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
PRKN-205ENST00000366897 SPRR1AP35321 89 aa8.64□□□□□ -1.03
PRKN-205ENST00000366897 PRLHP81277 87 aa8.64□□□□□ -1.03
PRKN-205ENST00000366897 PSCAO43653 123 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms