RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 DNAH10OSP0CZ25 163 aa7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 C4orf26Q17RF5 130 aa7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 MKI67P46013 3256 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 PRLHP81277 87 aa7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 SMR3AQ99954 134 aa7.97□□□□□ -1.13
CDC42BPA-202ENST00000366764 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.13
CDC42BPA-202ENST00000366764 TACC2O95359 2948 aa7.96□□□□□ -1.14
CDC42BPA-202ENST00000366764 LRCOL1A6NCL2 159 aa7.96□□□□□ -1.14
CDC42BPA-202ENST00000366764 UTP20O75691 2785 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-202ENST00000366764 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
CDC42BPA-202ENST00000366764 GIG44P09565 113 aaPredicted RBP7.94□□□□□ -1.14
CDC42BPA-202ENST00000366764 APCP25054 2843 aa7.94□□□□□ -1.14
CDC42BPA-202ENST00000366764 BAHCC1Q9P281 2608 aa7.94□□□□□ -1.14
CDC42BPA-202ENST00000366764 C16orf90A8MZG2 172 aa7.93□□□□□ -1.14
CDC42BPA-202ENST00000366764 LINC00476Q8WZB0 136 aa7.92□□□□□ -1.14
CDC42BPA-202ENST00000366764 MOBPQ13875 183 aa7.92□□□□□ -1.14
CDC42BPA-202ENST00000366764 H7BZZ5 65 aa7.91□□□□□ -1.14
CDC42BPA-202ENST00000366764 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
CDC42BPA-202ENST00000366764 PRUNE2Q8WUY3 3088 aa7.9□□□□□ -1.14
CDC42BPA-202ENST00000366764 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.15
CDC42BPA-202ENST00000366764 Q6ZRP5 223 aa7.89□□□□□ -1.15
CDC42BPA-202ENST00000366764 NIPBLQ6KC79 2804 aaeCLIP7.89□□□□□ -1.152e-6■■■■□ 19.4
CDC42BPA-202ENST00000366764 KALRNO60229 2985 aa7.89□□□□□ -1.15
CDC42BPA-202ENST00000366764 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 A8MWP4 228 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 BRCA2P51587 3418 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 CYP4F30PQ9H0H9 118 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
CDC42BPA-202ENST00000366764 DEFB116Q30KQ4 102 aa7.86□□□□□ -1.15
CDC42BPA-202ENST00000366764 ACYP2P14621 99 aa7.85□□□□□ -1.15
CDC42BPA-202ENST00000366764 LRBAP50851 2863 aa7.85□□□□□ -1.15
CDC42BPA-202ENST00000366764 LAMA1P25391 3075 aa7.84□□□□□ -1.15
CDC42BPA-202ENST00000366764 EPM2AB3EWF7 344 aa7.84□□□□□ -1.15
CDC42BPA-202ENST00000366764 ZANQ9Y493 2812 aa7.83□□□□□ -1.16
CDC42BPA-202ENST00000366764 M0R2N4 97 aa7.83□□□□□ -1.16
CDC42BPA-202ENST00000366764 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-202ENST00000366764 IGLV1-50A0A075B6I6 118 aa7.83□□□□□ -1.16
CDC42BPA-202ENST00000366764 FAM104AQ969W3 186 aa7.83□□□□□ -1.16
CDC42BPA-202ENST00000366764 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
CDC42BPA-202ENST00000366764 C15orf56Q8N910 161 aa7.82□□□□□ -1.16
CDC42BPA-202ENST00000366764 LINC00588Q9Y4M8 146 aa7.82□□□□□ -1.16
CDC42BPA-202ENST00000366764 K7EQZ3 153 aa7.8□□□□□ -1.16
CDC42BPA-202ENST00000366764 PRR15Q8IV56 129 aa7.8□□□□□ -1.16
CDC42BPA-202ENST00000366764 ZZEF1O43149 2961 aa7.79□□□□□ -1.16
CDC42BPA-202ENST00000366764 SPANXA2-OT1Q8N9U9 137 aa7.79□□□□□ -1.16
CDC42BPA-202ENST00000366764 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
CDC42BPA-202ENST00000366764 ST20-AS1Q8NBB2 130 aa7.79□□□□□ -1.16
CDC42BPA-202ENST00000366764 Q8N377 158 aa7.78□□□□□ -1.16
CDC42BPA-202ENST00000366764 SERTAD4-AS1Q5TG53 156 aa7.78□□□□□ -1.16
CDC42BPA-202ENST00000366764 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
CDC42BPA-202ENST00000366764 NF1P21359 2839 aa7.78□□□□□ -1.16
CDC42BPA-202ENST00000366764 WIPF1O43516 503 aa7.77□□□□□ -1.17
CDC42BPA-202ENST00000366764 LY6G6CO95867 125 aa7.76□□□□□ -1.17
CDC42BPA-202ENST00000366764 C9orf129Q5T035 196 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-202ENST00000366764 IGLV5-37A0A075B6J1 123 aa7.75□□□□□ -1.17
CDC42BPA-202ENST00000366764 A0A1B0GU69 56 aa7.75□□□□□ -1.17
CDC42BPA-202ENST00000366764 FAM229AH3BQW9 127 aa7.75□□□□□ -1.17
CDC42BPA-202ENST00000366764 IGFL1Q6UW32 110 aa7.75□□□□□ -1.17
CDC42BPA-202ENST00000366764 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
CDC42BPA-202ENST00000366764 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
CDC42BPA-202ENST00000366764 SPAG11AQ6PDA7 123 aa7.74□□□□□ -1.17
CDC42BPA-202ENST00000366764 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
CDC42BPA-202ENST00000366764 MDFIQ99750 246 aa7.73□□□□□ -1.17
CDC42BPA-202ENST00000366764 OCR1Q9BZK8 76 aa7.73□□□□□ -1.17
CDC42BPA-202ENST00000366764 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
CDC42BPA-202ENST00000366764 ATP11AUNQ6ZP68 121 aa7.71□□□□□ -1.18
CDC42BPA-202ENST00000366764 COA5Q86WW8 74 aa7.71□□□□□ -1.18
CDC42BPA-202ENST00000366764 XIRP2A4UGR9 3374 aa7.71□□□□□ -1.18
CDC42BPA-202ENST00000366764 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-202ENST00000366764 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
CDC42BPA-202ENST00000366764 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-202ENST00000366764 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
CDC42BPA-202ENST00000366764 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
CDC42BPA-202ENST00000366764 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-202ENST00000366764 UNC80Q8N2C7 3258 aa7.68□□□□□ -1.18
CDC42BPA-202ENST00000366764 LINC00313P59037 77 aa7.68□□□□□ -1.18
CDC42BPA-202ENST00000366764 DMBT1Q9UGM3 2413 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-202ENST00000366764 Q1T7F1 81 aa7.67□□□□□ -1.18
CDC42BPA-202ENST00000366764 CELSR2Q9HCU4 2923 aa7.67□□□□□ -1.18
CDC42BPA-202ENST00000366764 HIVEP1P15822 2718 aa7.67□□□□□ -1.18
CDC42BPA-202ENST00000366764 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
CDC42BPA-202ENST00000366764 KRTAP1-3Q8IUG1 177 aa7.66□□□□□ -1.18
CDC42BPA-202ENST00000366764 HRNRQ86YZ3 2850 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-202ENST00000366764 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
CDC42BPA-202ENST00000366764 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
CDC42BPA-202ENST00000366764 ADGRG4Q8IZF6 3080 aa7.65□□□□□ -1.18
CDC42BPA-202ENST00000366764 C8orf17Q9NRJ1 99 aa7.65□□□□□ -1.19
CDC42BPA-202ENST00000366764 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.19
CDC42BPA-202ENST00000366764 A8MUN3 132 aa7.65□□□□□ -1.19
CDC42BPA-202ENST00000366764 RTL8CO15255 209 aa7.64□□□□□ -1.19
CDC42BPA-202ENST00000366764 KRTAP24-1Q3LI83 254 aa7.64□□□□□ -1.19
CDC42BPA-202ENST00000366764 BOD1L1Q8NFC6 3051 aa7.63□□□□□ -1.19
CDC42BPA-202ENST00000366764 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
CDC42BPA-202ENST00000366764 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
CDC42BPA-202ENST00000366764 CD164Q04900 197 aa7.61□□□□□ -1.19
CDC42BPA-202ENST00000366764 KRTAP1-1Q07627 177 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms