RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 TRACP01848 142 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 PPP1R2P41236 205 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 RPS27P42677 84 aaKnown RBP-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 NDUFA6P56556 154 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 AKR1C8PQ5T2L2 129 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 CIB3Q96Q77 187 aaPredicted RBP-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 CGREF1Q99674 301 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 PAIP2Q9BPZ3 127 aaKnown RBP-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 PRR15LQ9BU68 103 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 RERGLQ9H628 205 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 C6orf48Q9UBA6 75 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 PRNDQ9UKY0 176 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 SSR3Q9UNL2 185 aa-0.31□□□□□ -2.46
RNU4-41P-201ENST00000364426 LOC101927531A0A1B0GV80 90 aa-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 PGRMC1O00264 195 aaKnown RBP-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 HMGN4O00479 90 aa-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 SLC25A5P05141 298 aaKnown RBP-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 GNG5P63218 68 aa-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 DSCR8Q96T75 97 aa-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 BIN3Q9NQY0 253 aa-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 LYRM2Q9NU23 88 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 MRPL36Q9P0J6 103 aaKnown RBP-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 S4R3F8 94 aa-0.32□□□□□ -2.46
RNU4-41P-201ENST00000364426 TRBV10-1A0A0K0K1A3 114 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 H3BQV1 296 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 APOC1P02654 83 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 DNAJB13P59910 316 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 TMEM229BQ8NBD8 167 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 THEM6Q8WUY1 208 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 AQP10Q96PS8 301 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 TAF9BQ9HBM6 251 aa-0.33□□□□□ -2.46
RNU4-41P-201ENST00000364426 TRBV7-3A0A075B6L6 115 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 F2Z2F3 143 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 K7EQZ3 153 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 NDUFA1O15239 70 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 TPST1O60507 370 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 TPT1P13693 172 aaKnown RBP-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 SPAG11BQ08648 103 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 CLEC2BQ92478 149 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 DMAC1Q96GE9 116 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 LAMTOR3Q9UHA4 124 aa-0.34□□□□□ -2.46
RNU4-41P-201ENST00000364426 TRBV25-1A0A075B6N4 114 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 A6NIN4 97 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 APOC4-APOC2K7ER74 178 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 M0QZ58 72 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 APOC2P02655 101 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 CTXN2P0C2S0 81 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 IGLC1P0CG04 106 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 FABP2P12104 132 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 HMGN3Q15651 99 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 PIGYQ3MUY2 71 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 PPP1R2P3Q6NXS1 205 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 OR5H6Q8NGV6 325 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 OR13C6PQ8NH95 151 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 PPP1R1CQ8WVI7 109 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 LSM10Q969L4 123 aaKnown RBP-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 BORCS8Q96FH0 119 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 NDUFA4L2Q9NRX3 87 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 BET1LQ9NYM9 111 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 COMMD3Q9UBI1 195 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 V9GYS6 101 aa-0.35□□□□□ -2.47
RNU4-41P-201ENST00000364426 A0A087WVE0 104 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 CRYM-AS1A6NIL9 109 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 IFITM5A6NNB3 132 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 MIF4GDA9UHW6 222 aaKnown RBP-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 EDF1O60869 148 aaKnown RBP-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 IFNA1P01562 189 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 TRAPPC2P0DI81 140 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 TRAPPC2BP0DI82 140 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 IL7P13232 177 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 RBP2P50120 134 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 MRPS25P82663 173 aaKnown RBP-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 ALKAL2Q6UX46 152 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 AKAP14Q86UN6 197 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 OR8I2Q8N0Y5 310 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 AP3S1Q92572 193 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 PRELID3AQ96N28 172 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 ATG5Q9H1Y0 275 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 SS18L2Q9UHA2 77 aa-0.36□□□□□ -2.47
RNU4-41P-201ENST00000364426 TRAV30A0A087WSZ9 112 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 IGHV1-24A0A0C4DH33 117 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 TRBV6-1A0A0K0K1D8 114 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 LINC01546A6NGU7 62 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 C9JAW5 83 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 CFDP00746 253 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 S100A6P06703 90 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 NMBP08949 121 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 GTF2A1P52655 376 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 FADDQ13158 208 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 C5orf38Q86SI9 138 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 STX19Q8N4C7 294 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 SMIM7Q9BQ49 75 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 SCN3BQ9NY72 215 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 IL20Q9NYY1 176 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 CALML5Q9NZT1 146 aa-0.37□□□□□ -2.47
RNU4-41P-201ENST00000364426 CPSF4LA6NMK7 179 aaKnown RBP-0.38□□□□□ -2.47
RNU4-41P-201ENST00000364426 IGKCP01834 107 aa-0.38□□□□□ -2.47
RNU4-41P-201ENST00000364426 CCKP06307 115 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms