RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 CFC1P0CG37 223 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 HERVK_113P61574 105 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 HIST1H4AP62805 103 aaKnown RBP4.1□□□□□ -1.75
SUDS3-201ENST00000360286 C9orf116Q5BN46 136 aaPredicted RBP4.1□□□□□ -1.75
SUDS3-201ENST00000360286 Q8IZM0 81 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 A0A096LNI7 61 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 IGKV2-24A0A0C4DH68 120 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 FAM236AA0A1B0GUQ0 79 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 FAM236BA0A1B0GV22 79 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 ZNF815PA8K554 130 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.75
SUDS3-201ENST00000360286 COX6CP09669 75 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 SCGB1D4Q6XE38 83 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 CIRBP-AS1Q8TBR5 109 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 PLEKHB2Q96CS7 222 aa4.09□□□□□ -1.75
SUDS3-201ENST00000360286 SEC61GP60059 68 aa4.08□□□□□ -1.76
SUDS3-201ENST00000360286 Q5XG85 94 aa4.08□□□□□ -1.76
SUDS3-201ENST00000360286 Q6ZRP5 223 aa4.08□□□□□ -1.76
SUDS3-201ENST00000360286 SCXQ7RTU7 201 aa4.08□□□□□ -1.76
SUDS3-201ENST00000360286 SPACA4Q8TDM5 124 aa4.08□□□□□ -1.76
SUDS3-201ENST00000360286 COPS9Q8WXC6 57 aa4.08□□□□□ -1.76
SUDS3-201ENST00000360286 A0A087WYN8 130 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 TEX49A0A1B0GTD5 131 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 NDUFC2O95298 119 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 RPL18AQ02543 176 aaKnown RBP4.07□□□□□ -1.76
SUDS3-201ENST00000360286 CIRBPQ14011 172 aaKnown RBP4.07□□□□□ -1.76
SUDS3-201ENST00000360286 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 DAND5Q8N907 189 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
SUDS3-201ENST00000360286 V9GYY9 64 aa4.07□□□□□ -1.76
SUDS3-201ENST00000360286 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
SUDS3-201ENST00000360286 LEPROTO15243 131 aa4.06□□□□□ -1.76
SUDS3-201ENST00000360286 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
SUDS3-201ENST00000360286 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
SUDS3-201ENST00000360286 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
SUDS3-201ENST00000360286 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
SUDS3-201ENST00000360286 BCE1O60756 84 aa4.05□□□□□ -1.76
SUDS3-201ENST00000360286 C9orf129Q5T035 196 aaKnown RBP4.05□□□□□ -1.76
SUDS3-201ENST00000360286 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
SUDS3-201ENST00000360286 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
SUDS3-201ENST00000360286 A0A0U1RRA0 63 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 J3QQQ9 107 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 LST1O00453 97 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 INAFM2P0DMQ5 153 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 PFN2P35080 140 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 C4orf26Q17RF5 130 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 Q8N1X5 172 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 XAGE1AQ9HD64 81 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 LINC00474Q9P2X8 69 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 PKIGQ9Y2B9 76 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
SUDS3-201ENST00000360286 PHF5AQ7RTV0 110 aaKnown RBP4.03□□□□□ -1.76
SUDS3-201ENST00000360286 NDUFA12Q9UI09 145 aa4.03□□□□□ -1.76
SUDS3-201ENST00000360286 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 hADV29S1A0JD25 119 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 FAM229AH3BQW9 127 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 LGALS3P17931 250 aaKnown RBP4.02□□□□□ -1.77
SUDS3-201ENST00000360286 LINC00158P58513 81 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 NPC2P61916 151 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 SERTAD4-AS1Q5TG53 156 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 Q5VSD8 79 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 LAMTOR3Q9UHA4 124 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
SUDS3-201ENST00000360286 SRRM2Q9UQ35 2752 aaKnown RBP4.01□□□□□ -1.77
SUDS3-201ENST00000360286 A0A0J9YXY3 114 aa4.01□□□□□ -1.77
SUDS3-201ENST00000360286 TRIAP1O43715 76 aa4.01□□□□□ -1.77
SUDS3-201ENST00000360286 COX17Q14061 63 aa4.01□□□□□ -1.77
SUDS3-201ENST00000360286 Q1RN00 199 aa4.01□□□□□ -1.77
SUDS3-201ENST00000360286 Q6JHZ5 121 aa4.01□□□□□ -1.77
SUDS3-201ENST00000360286 SFTA2Q6UW10 78 aa4.01□□□□□ -1.77
SUDS3-201ENST00000360286 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
SUDS3-201ENST00000360286 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
SUDS3-201ENST00000360286 RPL37AP61513 92 aaKnown RBP4□□□□□ -1.77
SUDS3-201ENST00000360286 C1orf195Q5TG92 126 aa4□□□□□ -1.77
SUDS3-201ENST00000360286 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
SUDS3-201ENST00000360286 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
SUDS3-201ENST00000360286 Q8NDZ9 215 aa4□□□□□ -1.77
SUDS3-201ENST00000360286 SND1-IT1Q9HBX3 110 aa4□□□□□ -1.77
SUDS3-201ENST00000360286 C22orf24Q9Y442 160 aa4□□□□□ -1.77
SUDS3-201ENST00000360286 TIMM17BO60830 172 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 OXTP01178 125 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 PLA2G1BP04054 148 aaKnown RBP3.99□□□□□ -1.77
SUDS3-201ENST00000360286 ADAMTSL4-AS1Q5T5F5 129 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 ATP5EP2Q5VTU8 51 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 MUSTN1Q8IVN3 82 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 C7orf33Q8WU49 177 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 PLA2G2DQ9UNK4 145 aa3.99□□□□□ -1.77
SUDS3-201ENST00000360286 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
SUDS3-201ENST00000360286 FAM236CP0DP71 79 aa3.98□□□□□ -1.77
SUDS3-201ENST00000360286 VPREB1P12018 145 aa3.98□□□□□ -1.77
SUDS3-201ENST00000360286 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
SUDS3-201ENST00000360286 S100A7L2Q5SY68 101 aa3.98□□□□□ -1.77
SUDS3-201ENST00000360286 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
SUDS3-201ENST00000360286 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
SUDS3-201ENST00000360286 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms