RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 LINC00304Q8N9R0 145 aa6.22□□□□□ -1.41
VPS13A-203ENST00000360280 CSNK1G2-AS1Q8NCQ2 148 aa6.22□□□□□ -1.41
VPS13A-203ENST00000360280 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
VPS13A-203ENST00000360280 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
VPS13A-203ENST00000360280 LINC00528Q8N1L1 170 aa6.21□□□□□ -1.41
VPS13A-203ENST00000360280 A0A0D9SG42 100 aa6.21□□□□□ -1.42
VPS13A-203ENST00000360280 J3QL48 77 aa6.21□□□□□ -1.42
VPS13A-203ENST00000360280 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
VPS13A-203ENST00000360280 MTORP42345 2549 aa6.19□□□□□ -1.42
VPS13A-203ENST00000360280 IGLV5-37A0A075B6J1 123 aa6.19□□□□□ -1.42
VPS13A-203ENST00000360280 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
VPS13A-203ENST00000360280 Q8NAQ8 132 aa6.18□□□□□ -1.42
VPS13A-203ENST00000360280 KRTAP10-9P60411 292 aa6.17□□□□□ -1.42
VPS13A-203ENST00000360280 ZNF861PO60384 105 aa6.17□□□□□ -1.42
VPS13A-203ENST00000360280 USP9YO00507 2555 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-203ENST00000360280 WIPF1O43516 503 aa6.17□□□□□ -1.42
VPS13A-203ENST00000360280 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
VPS13A-203ENST00000360280 Q8N377 158 aa6.15□□□□□ -1.43
VPS13A-203ENST00000360280 IGLV5-48A0A075B6I7 105 aa6.14□□□□□ -1.43
VPS13A-203ENST00000360280 C15orf56Q8N910 161 aa6.14□□□□□ -1.43
VPS13A-203ENST00000360280 H3BS24 57 aa6.14□□□□□ -1.43
VPS13A-203ENST00000360280 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
VPS13A-203ENST00000360280 A0A1W2PPR1 153 aa6.13□□□□□ -1.43
VPS13A-203ENST00000360280 Q75L30 129 aa6.13□□□□□ -1.43
VPS13A-203ENST00000360280 POLQO75417 2590 aa6.13□□□□□ -1.43
VPS13A-203ENST00000360280 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
VPS13A-203ENST00000360280 TLX1NBP0CAT3 122 aa6.11□□□□□ -1.43
VPS13A-203ENST00000360280 USP24Q9UPU5 2620 aa6.1□□□□□ -1.43
VPS13A-203ENST00000360280 Q8N1X5 172 aa6.1□□□□□ -1.43
VPS13A-203ENST00000360280 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
VPS13A-203ENST00000360280 ZNF575Q86XF7 245 aa6.09□□□□□ -1.44
VPS13A-203ENST00000360280 A0A1B0GU33 70 aa6.08□□□□□ -1.44
VPS13A-203ENST00000360280 PRR34Q9NV39 138 aa6.08□□□□□ -1.44
VPS13A-203ENST00000360280 WWC2-AS2Q96NR7 200 aa6.07□□□□□ -1.44
VPS13A-203ENST00000360280 OCR1Q9BZK8 76 aa6.05□□□□□ -1.44
VPS13A-203ENST00000360280 CEP295Q9C0D2 2601 aa6.05□□□□□ -1.44
VPS13A-203ENST00000360280 BPTFQ12830 3046 aa6.05□□□□□ -1.44
VPS13A-203ENST00000360280 IGLV7-43P04211 117 aa6.04□□□□□ -1.44
VPS13A-203ENST00000360280 C9orf163Q8N9P6 203 aa6.04□□□□□ -1.44
VPS13A-203ENST00000360280 SPRR4Q96PI1 79 aa6.04□□□□□ -1.44
VPS13A-203ENST00000360280 IGLV7-46A0A075B6I9 117 aa6.04□□□□□ -1.44
VPS13A-203ENST00000360280 FASNP49327 2511 aaKnown RBP6.03□□□□□ -1.44
VPS13A-203ENST00000360280 C10orf142B7Z368 130 aa6.02□□□□□ -1.45
VPS13A-203ENST00000360280 KLK9Q2XQG4 91 aa6□□□□□ -1.45
VPS13A-203ENST00000360280 EIF4EBP3O60516 100 aaPredicted RBP6□□□□□ -1.45
VPS13A-203ENST00000360280 HRES1P13985 223 aa6□□□□□ -1.45
VPS13A-203ENST00000360280 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
VPS13A-203ENST00000360280 CENPFP49454 3210 aa5.99□□□□□ -1.45
VPS13A-203ENST00000360280 PSORS1C2Q9UIG4 136 aa5.99□□□□□ -1.45
VPS13A-203ENST00000360280 A0A1W2PNM2 257 aa5.99□□□□□ -1.45
VPS13A-203ENST00000360280 CNBPP62633 177 aaKnown RBP5.98□□□□□ -1.45
VPS13A-203ENST00000360280 A0A087WTM6 91 aa5.98□□□□□ -1.45
VPS13A-203ENST00000360280 A0A0G2JQZ4 141 aa5.97□□□□□ -1.45
VPS13A-203ENST00000360280 A0A1W2PNN7 141 aa5.97□□□□□ -1.45
VPS13A-203ENST00000360280 PRRC2CQ9Y520 2896 aaKnown RBP5.96□□□□□ -1.45
VPS13A-203ENST00000360280 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
VPS13A-203ENST00000360280 Q6ZSA8 131 aa5.96□□□□□ -1.46
VPS13A-203ENST00000360280 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
VPS13A-203ENST00000360280 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
VPS13A-203ENST00000360280 ANAPC11Q9NYG5 84 aa5.94□□□□□ -1.46
VPS13A-203ENST00000360280 SPINK7P58062 85 aa5.94□□□□□ -1.46
VPS13A-203ENST00000360280 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
VPS13A-203ENST00000360280 S4R3F8 94 aa5.92□□□□□ -1.46
VPS13A-203ENST00000360280 LINC00612Q8N6U2 182 aa5.91□□□□□ -1.46
VPS13A-203ENST00000360280 SRCAPQ6ZRS2 3230 aa5.91□□□□□ -1.46
VPS13A-203ENST00000360280 Q5XG85 94 aa5.9□□□□□ -1.46
VPS13A-203ENST00000360280 FAM229BQ4G0N7 80 aa5.9□□□□□ -1.47
VPS13A-203ENST00000360280 SMR3BP02814 79 aaPredicted RBP5.9□□□□□ -1.47
VPS13A-203ENST00000360280 TNP2Q05952 138 aa5.9□□□□□ -1.47
VPS13A-203ENST00000360280 M0R2T5 61 aa5.89□□□□□ -1.47
VPS13A-203ENST00000360280 R4GN34 69 aa5.89□□□□□ -1.47
VPS13A-203ENST00000360280 EPG5Q9HCE0 2579 aa5.89□□□□□ -1.47
VPS13A-203ENST00000360280 GIG44P09565 113 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-203ENST00000360280 Q5VV11 94 aa5.89□□□□□ -1.47
VPS13A-203ENST00000360280 PRAC1Q96KF2 57 aa5.88□□□□□ -1.47
VPS13A-203ENST00000360280 ROMO1P60602 79 aa5.88□□□□□ -1.47
VPS13A-203ENST00000360280 KRTAP10-11P60412 298 aa5.87□□□□□ -1.47
VPS13A-203ENST00000360280 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
VPS13A-203ENST00000360280 C19orf73Q9NVV2 129 aa5.86□□□□□ -1.47
VPS13A-203ENST00000360280 K7EIL1 84 aa5.85□□□□□ -1.47
VPS13A-203ENST00000360280 ZCCHC13Q8WW36 166 aaKnown RBP5.84□□□□□ -1.48
VPS13A-203ENST00000360280 FP248Q71RG6 208 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-203ENST00000360280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-203ENST00000360280 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
VPS13A-203ENST00000360280 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
VPS13A-203ENST00000360280 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
VPS13A-203ENST00000360280 FLNAP21333 2647 aaKnown RBP5.8□□□□□ -1.48
VPS13A-203ENST00000360280 NBEAL1Q6ZS30 2694 aa5.79□□□□□ -1.48
VPS13A-203ENST00000360280 Q5W150 140 aa5.78□□□□□ -1.48
VPS13A-203ENST00000360280 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
VPS13A-203ENST00000360280 MGAM2Q2M2H8 2515 aa5.76□□□□□ -1.49
VPS13A-203ENST00000360280 CENPEQ02224 2701 aa5.76□□□□□ -1.49
VPS13A-203ENST00000360280 HECTD1Q9ULT8 2610 aa5.75□□□□□ -1.49
VPS13A-203ENST00000360280 CASC10Q5T4H9 136 aa5.75□□□□□ -1.49
VPS13A-203ENST00000360280 MAST4O15021 2626 aa5.73□□□□□ -1.49
VPS13A-203ENST00000360280 CFAP46Q8IYW2 2715 aa5.73□□□□□ -1.49
VPS13A-203ENST00000360280 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-203ENST00000360280 LINC00472Q9H8W2 130 aa5.71□□□□□ -1.49
VPS13A-203ENST00000360280 M0QZ58 72 aa5.71□□□□□ -1.5
VPS13A-203ENST00000360280 EP400Q96L91 3159 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms