RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 A0A0D9SG42 100 aa11.84□□□□□ -0.51
CACNA1A-201ENST00000360228 IGLV5-45A0A087WSX0 123 aa11.83□□□□□ -0.52
CACNA1A-201ENST00000360228 C8orf17Q9NRJ1 99 aa11.83□□□□□ -0.52
CACNA1A-201ENST00000360228 MRPL34Q9BQ48 92 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-201ENST00000360228 KRTAP10-9P60411 292 aa11.82□□□□□ -0.52
CACNA1A-201ENST00000360228 ATRQ13535 2644 aa11.82□□□□□ -0.52
CACNA1A-201ENST00000360228 LINC00315P59091 139 aa11.8□□□□□ -0.52
CACNA1A-201ENST00000360228 C9orf92A6NGG3 77 aa11.8□□□□□ -0.52
CACNA1A-201ENST00000360228 OBSCN-AS1Q96MR7 158 aa11.79□□□□□ -0.52
CACNA1A-201ENST00000360228 Q1T7F1 81 aa11.78□□□□□ -0.52
CACNA1A-201ENST00000360228 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
CACNA1A-201ENST00000360228 NBEAL1Q6ZS30 2694 aa11.77□□□□□ -0.52
CACNA1A-201ENST00000360228 DSCR10P59022 87 aa11.76□□□□□ -0.53
CACNA1A-201ENST00000360228 SPANXA2-OT1Q8N9U9 137 aa11.73□□□□□ -0.53
CACNA1A-201ENST00000360228 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
CACNA1A-201ENST00000360228 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
CACNA1A-201ENST00000360228 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
CACNA1A-201ENST00000360228 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
CACNA1A-201ENST00000360228 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-201ENST00000360228 RBM12B-AS1Q9P1G2 102 aa11.68□□□□□ -0.54
CACNA1A-201ENST00000360228 H7BZZ5 65 aa11.68□□□□□ -0.54
CACNA1A-201ENST00000360228 IGLV5-37A0A075B6J1 123 aa11.67□□□□□ -0.54
CACNA1A-201ENST00000360228 GVQW2A0A096LPI5 108 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-201ENST00000360228 LINC00304Q8N9R0 145 aa11.66□□□□□ -0.54
CACNA1A-201ENST00000360228 H3BNG1 76 aa11.66□□□□□ -0.54
CACNA1A-201ENST00000360228 LINC00588Q9Y4M8 146 aa11.63□□□□□ -0.55
CACNA1A-201ENST00000360228 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
CACNA1A-201ENST00000360228 A0A1B0GVX0 72 aa11.6□□□□□ -0.55
CACNA1A-201ENST00000360228 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
CACNA1A-201ENST00000360228 GOLGB1Q14789 3259 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-201ENST00000360228 IGLV5-48A0A075B6I7 105 aa11.59□□□□□ -0.55
CACNA1A-201ENST00000360228 DMAC1Q96GE9 116 aa11.59□□□□□ -0.55
CACNA1A-201ENST00000360228 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
CACNA1A-201ENST00000360228 CAMK2N1Q7Z7J9 78 aa11.53□□□□□ -0.56
CACNA1A-201ENST00000360228 Q8N1X5 172 aa11.53□□□□□ -0.56
CACNA1A-201ENST00000360228 PLA2G2DQ9UNK4 145 aa11.53□□□□□ -0.56
CACNA1A-201ENST00000360228 COL4A2P08572 1712 aa11.52□□□□□ -0.56
CACNA1A-201ENST00000360228 A0A1W2PPR1 153 aa11.52□□□□□ -0.56
CACNA1A-201ENST00000360228 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.56
CACNA1A-201ENST00000360228 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
CACNA1A-201ENST00000360228 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-201ENST00000360228 Q8NAQ8 132 aa11.49□□□□□ -0.57
CACNA1A-201ENST00000360228 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
CACNA1A-201ENST00000360228 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
CACNA1A-201ENST00000360228 ZNF861PO60384 105 aa11.45□□□□□ -0.58
CACNA1A-201ENST00000360228 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
CACNA1A-201ENST00000360228 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
CACNA1A-201ENST00000360228 Q75L30 129 aa11.44□□□□□ -0.58
CACNA1A-201ENST00000360228 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
CACNA1A-201ENST00000360228 EP400Q96L91 3159 aa11.42□□□□□ -0.58
CACNA1A-201ENST00000360228 ANAPC11Q9NYG5 84 aa11.42□□□□□ -0.58
CACNA1A-201ENST00000360228 SMR3BP02814 79 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-201ENST00000360228 FLNBO75369 2602 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-201ENST00000360228 WWC2-AS2Q96NR7 200 aa11.4□□□□□ -0.58
CACNA1A-201ENST00000360228 Q8N377 158 aa11.4□□□□□ -0.58
CACNA1A-201ENST00000360228 LITAFQ99732 161 aa11.39□□□□□ -0.59
CACNA1A-201ENST00000360228 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-201ENST00000360228 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
CACNA1A-201ENST00000360228 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-201ENST00000360228 A0A1B0GU33 70 aa11.37□□□□□ -0.59
CACNA1A-201ENST00000360228 CEP350Q5VT06 3117 aa11.36□□□□□ -0.59
CACNA1A-201ENST00000360228 C15orf56Q8N910 161 aa11.35□□□□□ -0.59
CACNA1A-201ENST00000360228 M0R2T5 61 aa11.35□□□□□ -0.59
CACNA1A-201ENST00000360228 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
CACNA1A-201ENST00000360228 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
CACNA1A-201ENST00000360228 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
CACNA1A-201ENST00000360228 BAHCC1Q9P281 2608 aa11.32□□□□□ -0.6
CACNA1A-201ENST00000360228 SPINK7P58062 85 aa11.29□□□□□ -0.6
CACNA1A-201ENST00000360228 CSAG1Q6PB30 78 aa11.29□□□□□ -0.6
CACNA1A-201ENST00000360228 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-201ENST00000360228 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
CACNA1A-201ENST00000360228 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 KRTAP16-1A8MUX0 517 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 UNC79Q9P2D8 2635 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 UTRNP46939 3433 aa11.27□□□□□ -0.61
CACNA1A-201ENST00000360228 ASB16-AS1Q495Z4 193 aa11.26□□□□□ -0.61
CACNA1A-201ENST00000360228 Q6ZSA8 131 aa11.25□□□□□ -0.61
CACNA1A-201ENST00000360228 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
CACNA1A-201ENST00000360228 COL6A5A8TX70 2615 aa11.23□□□□□ -0.61
CACNA1A-201ENST00000360228 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
CACNA1A-201ENST00000360228 PCNTO95613 3336 aa11.23□□□□□ -0.61
CACNA1A-201ENST00000360228 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
CACNA1A-201ENST00000360228 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
CACNA1A-201ENST00000360228 HRES1P13985 223 aa11.2□□□□□ -0.62
CACNA1A-201ENST00000360228 A0A087WTM6 91 aa11.2□□□□□ -0.62
CACNA1A-201ENST00000360228 LINC01558Q9Y6Z2 57 aa11.2□□□□□ -0.62
CACNA1A-201ENST00000360228 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
CACNA1A-201ENST00000360228 C5orf42Q9H799 3197 aa11.17□□□□□ -0.62
CACNA1A-201ENST00000360228 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-201ENST00000360228 SPRR4Q96PI1 79 aa11.17□□□□□ -0.62
CACNA1A-201ENST00000360228 OCR1Q9BZK8 76 aa11.16□□□□□ -0.62
CACNA1A-201ENST00000360228 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
CACNA1A-201ENST00000360228 PRAC1Q96KF2 57 aa11.13□□□□□ -0.63
CACNA1A-201ENST00000360228 KRTAP10-11P60412 298 aa11.12□□□□□ -0.63
CACNA1A-201ENST00000360228 PRR34Q9NV39 138 aa11.11□□□□□ -0.63
CACNA1A-201ENST00000360228 S4R3F8 94 aa11.11□□□□□ -0.63
CACNA1A-201ENST00000360228 TEX15Q9BXT5 2789 aa11.1□□□□□ -0.63
CACNA1A-201ENST00000360228 K7EIL1 84 aa11.07□□□□□ -0.64
CACNA1A-201ENST00000360228 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-201ENST00000360228 A0A1W2PNM2 257 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms