RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 ANK2Q01484 3957 aa13.66□□□□□ -0.22
TRIM3-202ENST00000359518 C3orf84H3BNL1 204 aa13.65□□□□□ -0.22
TRIM3-202ENST00000359518 H7BZZ5 65 aa13.65□□□□□ -0.22
TRIM3-202ENST00000359518 FAM236DA0A1B0GTK5 79 aa13.65□□□□□ -0.22
TRIM3-202ENST00000359518 FAM236CP0DP71 79 aa13.65□□□□□ -0.22
TRIM3-202ENST00000359518 FBN1P35555 2871 aaKnown RBP13.64□□□□□ -0.23
TRIM3-202ENST00000359518 H3BQ85 93 aa13.63□□□□□ -0.23
TRIM3-202ENST00000359518 WIPF1O43516 503 aa13.63□□□□□ -0.23
TRIM3-202ENST00000359518 Q5XG85 94 aa13.63□□□□□ -0.23
TRIM3-202ENST00000359518 SERTAD4-AS1Q5TG53 156 aa13.61□□□□□ -0.23
TRIM3-202ENST00000359518 TRBV7-6A0A0J9YX20 115 aa13.6□□□□□ -0.23
TRIM3-202ENST00000359518 RPL37AP8A6NKH3 93 aa13.6□□□□□ -0.23
TRIM3-202ENST00000359518 F8WEM9 126 aa13.6□□□□□ -0.23
TRIM3-202ENST00000359518 KRTAP10-11P60412 298 aa13.6□□□□□ -0.23
TRIM3-202ENST00000359518 SYCNQ0VAF6 134 aa13.6□□□□□ -0.23
TRIM3-202ENST00000359518 NKAPP1Q8N9T2 125 aa13.59□□□□□ -0.23
TRIM3-202ENST00000359518 BPY2O14599 106 aa13.58□□□□□ -0.23
TRIM3-202ENST00000359518 NREPQ16612 68 aa13.57□□□□□ -0.24
TRIM3-202ENST00000359518 C7orf33Q8WU49 177 aa13.56□□□□□ -0.24
TRIM3-202ENST00000359518 LINC00336Q6ZUF6 198 aa13.56□□□□□ -0.24
TRIM3-202ENST00000359518 KLKP1Q107X0 134 aa13.56□□□□□ -0.24
TRIM3-202ENST00000359518 DEFB131BA0A096LNP1 70 aa13.55□□□□□ -0.24
TRIM3-202ENST00000359518 FAM168BA1KXE4 195 aa13.54□□□□□ -0.24
TRIM3-202ENST00000359518 BCE1O60756 84 aa13.53□□□□□ -0.24
TRIM3-202ENST00000359518 COL6A5A8TX70 2615 aa13.53□□□□□ -0.24
TRIM3-202ENST00000359518 Q8N377 158 aa13.53□□□□□ -0.24
TRIM3-202ENST00000359518 A0A0U1RQV1 116 aa13.52□□□□□ -0.24
TRIM3-202ENST00000359518 H3BNG1 76 aa13.51□□□□□ -0.25
TRIM3-202ENST00000359518 CASC10Q5T4H9 136 aa13.5□□□□□ -0.25
TRIM3-202ENST00000359518 IGKV4-1P06312 121 aa13.5□□□□□ -0.25
TRIM3-202ENST00000359518 LINC01556Q5JQF7 62 aa13.5□□□□□ -0.25
TRIM3-202ENST00000359518 KCNQ1DNQ9H478 68 aa13.49□□□□□ -0.25
TRIM3-202ENST00000359518 C11orf45Q8TAV5 145 aa13.48□□□□□ -0.25
TRIM3-202ENST00000359518 ST20-AS1Q8NBB2 130 aa13.48□□□□□ -0.25
TRIM3-202ENST00000359518 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
TRIM3-202ENST00000359518 TMEM254Q8TBM7 123 aa13.46□□□□□ -0.25
TRIM3-202ENST00000359518 SERP1Q9Y6X1 66 aa13.46□□□□□ -0.25
TRIM3-202ENST00000359518 Q9BRP9 147 aa13.45□□□□□ -0.26
TRIM3-202ENST00000359518 ETDCA0A1B0GVM5 59 aa13.42□□□□□ -0.26
TRIM3-202ENST00000359518 PRB2P02812 416 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-202ENST00000359518 Q6ZRX8 168 aa13.4□□□□□ -0.26
TRIM3-202ENST00000359518 A0A1W2PNM2 257 aa13.4□□□□□ -0.26
TRIM3-202ENST00000359518 ERC2-IT1O76042 136 aa13.39□□□□□ -0.27
TRIM3-202ENST00000359518 FUSP35637 526 aaKnown RBP eCLIP13.39□□□□□ -0.27
TRIM3-202ENST00000359518 MRAPQ8TCY5 172 aa13.39□□□□□ -0.27
TRIM3-202ENST00000359518 A0A0G2JQZ4 141 aa13.38□□□□□ -0.27
TRIM3-202ENST00000359518 A0A1W2PNN7 141 aa13.38□□□□□ -0.27
TRIM3-202ENST00000359518 IGLV5-48A0A075B6I7 105 aa13.38□□□□□ -0.27
TRIM3-202ENST00000359518 C1orf137Q5JT78 98 aa13.38□□□□□ -0.27
TRIM3-202ENST00000359518 LINC00474Q9P2X8 69 aa13.38□□□□□ -0.27
TRIM3-202ENST00000359518 KRTAP7-1Q8IUC3 87 aa13.37□□□□□ -0.27
TRIM3-202ENST00000359518 OCR1Q9BZK8 76 aa13.37□□□□□ -0.27
TRIM3-202ENST00000359518 FAM30AQ9NZY2 134 aa13.37□□□□□ -0.27
TRIM3-202ENST00000359518 HIGD2AQ9BW72 106 aa13.37□□□□□ -0.27
TRIM3-202ENST00000359518 IGLV1-50A0A075B6I6 118 aa13.36□□□□□ -0.27
TRIM3-202ENST00000359518 DNAH10OSP0CZ25 163 aa13.36□□□□□ -0.27
TRIM3-202ENST00000359518 UBE2BP63146 152 aa13.36□□□□□ -0.27
TRIM3-202ENST00000359518 LINC00588Q9Y4M8 146 aa13.36□□□□□ -0.27
TRIM3-202ENST00000359518 SMIM29Q86T20 159 aa13.35□□□□□ -0.27
TRIM3-202ENST00000359518 BRK1Q8WUW1 75 aa13.35□□□□□ -0.27
TRIM3-202ENST00000359518 DHRS4-AS1Q9P1J3 65 aa13.35□□□□□ -0.27
TRIM3-202ENST00000359518 PRO0628Q9UI54 55 aa13.35□□□□□ -0.27
TRIM3-202ENST00000359518 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
TRIM3-202ENST00000359518 FP248Q71RG6 208 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-202ENST00000359518 SRRM2Q9UQ35 2752 aaKnown RBP13.33□□□□□ -0.28
TRIM3-202ENST00000359518 KRTAP4-16G5E9R7 235 aaPredicted RBP13.33□□□□□ -0.28
TRIM3-202ENST00000359518 NDUFC1O43677 76 aa13.33□□□□□ -0.28
TRIM3-202ENST00000359518 F8WDY8 70 aa13.3□□□□□ -0.28
TRIM3-202ENST00000359518 PRYO14603 147 aa13.3□□□□□ -0.28
TRIM3-202ENST00000359518 MRPL55Q7Z7F7 128 aaKnown RBP13.29□□□□□ -0.28
TRIM3-202ENST00000359518 CSMD3Q7Z407 3707 aa13.29□□□□□ -0.28
TRIM3-202ENST00000359518 TLX1NBP0CAT3 122 aa13.29□□□□□ -0.28
TRIM3-202ENST00000359518 MGAM2Q2M2H8 2515 aa13.28□□□□□ -0.28
TRIM3-202ENST00000359518 SMIM26A0A096LP01 95 aa13.28□□□□□ -0.28
TRIM3-202ENST00000359518 Q8NBF4 154 aa13.28□□□□□ -0.28
TRIM3-202ENST00000359518 DEFB116Q30KQ4 102 aa13.27□□□□□ -0.28
TRIM3-202ENST00000359518 KRTAP24-1Q3LI83 254 aa13.27□□□□□ -0.29
TRIM3-202ENST00000359518 CMYA5Q8N3K9 4069 aa13.27□□□□□ -0.29
TRIM3-202ENST00000359518 TNP2Q05952 138 aa13.26□□□□□ -0.29
TRIM3-202ENST00000359518 FAM229BQ4G0N7 80 aa13.26□□□□□ -0.29
TRIM3-202ENST00000359518 SPRR1AP35321 89 aa13.26□□□□□ -0.29
TRIM3-202ENST00000359518 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
TRIM3-202ENST00000359518 IGKV2-24A0A0C4DH68 120 aa13.25□□□□□ -0.29
TRIM3-202ENST00000359518 SEC61GP60059 68 aa13.25□□□□□ -0.29
TRIM3-202ENST00000359518 K7EQZ3 153 aa13.24□□□□□ -0.29
TRIM3-202ENST00000359518 MPLKIPQ8TAP9 179 aa13.24□□□□□ -0.29
TRIM3-202ENST00000359518 PLA2G2DQ9UNK4 145 aa13.24□□□□□ -0.29
TRIM3-202ENST00000359518 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
TRIM3-202ENST00000359518 DSCR10P59022 87 aa13.23□□□□□ -0.29
TRIM3-202ENST00000359518 PRLHP81277 87 aa13.22□□□□□ -0.29
TRIM3-202ENST00000359518 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.29
TRIM3-202ENST00000359518 REG3GQ6UW15 175 aa13.2□□□□□ -0.3
TRIM3-202ENST00000359518 LYSTQ99698 3801 aa13.2□□□□□ -0.3
TRIM3-202ENST00000359518 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
TRIM3-202ENST00000359518 LINC00476Q8WZB0 136 aa13.19□□□□□ -0.3
TRIM3-202ENST00000359518 ATP5EP56381 51 aaPredicted RBP13.18□□□□□ -0.3
TRIM3-202ENST00000359518 SPRR4Q96PI1 79 aa13.17□□□□□ -0.3
TRIM3-202ENST00000359518 LRCOL1A6NCL2 159 aa13.17□□□□□ -0.3
TRIM3-202ENST00000359518 V9GYY9 64 aa13.17□□□□□ -0.3
TRIM3-202ENST00000359518 C1orf195Q5TG92 126 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms