RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
CNOT3-202ENST00000358389 RETNQ9HD89 108 aa7.76□□□□□ -1.17
CNOT3-202ENST00000358389 H3BQ85 93 aa7.76□□□□□ -1.17
CNOT3-202ENST00000358389 CELSR2Q9HCU4 2923 aa7.75□□□□□ -1.17
CNOT3-202ENST00000358389 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
CNOT3-202ENST00000358389 STAB1Q9NY15 2570 aa7.75□□□□□ -1.17
CNOT3-202ENST00000358389 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
CNOT3-202ENST00000358389 H0Y9J4 135 aa7.75□□□□□ -1.17
CNOT3-202ENST00000358389 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
CNOT3-202ENST00000358389 IGHV4-30-4P0DP06 118 aa7.74□□□□□ -1.17
CNOT3-202ENST00000358389 FLNCQ14315 2725 aa7.74□□□□□ -1.17
CNOT3-202ENST00000358389 A0A1B0GUV1 79 aa7.74□□□□□ -1.17
CNOT3-202ENST00000358389 MP68P56378 58 aa7.73□□□□□ -1.17
CNOT3-202ENST00000358389 IGKV4-1P06312 121 aa7.73□□□□□ -1.17
CNOT3-202ENST00000358389 LELP1Q5T871 98 aa7.73□□□□□ -1.17
CNOT3-202ENST00000358389 GIG44P09565 113 aaPredicted RBP7.72□□□□□ -1.17
CNOT3-202ENST00000358389 APCP25054 2843 aa7.72□□□□□ -1.17
CNOT3-202ENST00000358389 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
CNOT3-202ENST00000358389 MXRA5Q9NR99 2828 aa7.72□□□□□ -1.17
CNOT3-202ENST00000358389 IGLV6-57P01721 117 aa7.71□□□□□ -1.17
CNOT3-202ENST00000358389 COL6A5A8TX70 2615 aa7.71□□□□□ -1.18
CNOT3-202ENST00000358389 OCR1Q9BZK8 76 aa7.71□□□□□ -1.18
CNOT3-202ENST00000358389 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
CNOT3-202ENST00000358389 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
CNOT3-202ENST00000358389 NIPBLQ6KC79 2804 aaeCLIP7.7□□□□□ -1.18
CNOT3-202ENST00000358389 NDUFB1O75438 58 aa7.7□□□□□ -1.18
CNOT3-202ENST00000358389 Q6ZTC4 211 aa7.7□□□□□ -1.18
CNOT3-202ENST00000358389 NF1P21359 2839 aa7.7□□□□□ -1.18
CNOT3-202ENST00000358389 WFDC10BQ8IUB3 73 aa7.7□□□□□ -1.18
CNOT3-202ENST00000358389 WFDC13Q8IUB5 93 aa7.69□□□□□ -1.18
CNOT3-202ENST00000358389 A0A0J9YWU9 116 aa7.68□□□□□ -1.18
CNOT3-202ENST00000358389 hDV103S1A0JD37 113 aa7.67□□□□□ -1.18
CNOT3-202ENST00000358389 A8MUN3 132 aa7.67□□□□□ -1.18
CNOT3-202ENST00000358389 M0R378 163 aa7.67□□□□□ -1.18
CNOT3-202ENST00000358389 ELOF1P60002 83 aaKnown RBP7.66□□□□□ -1.18
CNOT3-202ENST00000358389 MRPL55Q7Z7F7 128 aaKnown RBP7.66□□□□□ -1.18
CNOT3-202ENST00000358389 Q6ZRP5 223 aa7.66□□□□□ -1.18
CNOT3-202ENST00000358389 TRAV22A0A0B4J277 110 aa7.65□□□□□ -1.18
CNOT3-202ENST00000358389 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
CNOT3-202ENST00000358389 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.18
CNOT3-202ENST00000358389 DEFB116Q30KQ4 102 aa7.65□□□□□ -1.18
CNOT3-202ENST00000358389 PRR15Q8IV56 129 aa7.65□□□□□ -1.19
CNOT3-202ENST00000358389 UTP20O75691 2785 aaKnown RBP7.64□□□□□ -1.19
CNOT3-202ENST00000358389 CSNK1G2-AS1Q8NCQ2 148 aa7.63□□□□□ -1.19
CNOT3-202ENST00000358389 C14orf177Q52M58 125 aa7.62□□□□□ -1.19
CNOT3-202ENST00000358389 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
CNOT3-202ENST00000358389 LINC00612Q8N6U2 182 aa7.61□□□□□ -1.19
CNOT3-202ENST00000358389 B9D2Q9BPU9 175 aa7.6□□□□□ -1.19
CNOT3-202ENST00000358389 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
CNOT3-202ENST00000358389 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
CNOT3-202ENST00000358389 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
CNOT3-202ENST00000358389 IGSF10Q6WRI0 2623 aa7.59□□□□□ -1.19
CNOT3-202ENST00000358389 Q1T7F1 81 aa7.59□□□□□ -1.2
CNOT3-202ENST00000358389 Q6ZRU5 148 aa7.59□□□□□ -1.2
CNOT3-202ENST00000358389 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.2
CNOT3-202ENST00000358389 PRR15LQ9BU68 103 aa7.59□□□□□ -1.2
CNOT3-202ENST00000358389 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
CNOT3-202ENST00000358389 A8MU10 97 aa7.58□□□□□ -1.2
CNOT3-202ENST00000358389 VPREB1P12018 145 aa7.58□□□□□ -1.2
CNOT3-202ENST00000358389 LY6G6CO95867 125 aa7.57□□□□□ -1.2
CNOT3-202ENST00000358389 NSD1Q96L73 2696 aaPredicted RBP7.57□□□□□ -1.2
CNOT3-202ENST00000358389 K7EQZ3 153 aa7.57□□□□□ -1.2
CNOT3-202ENST00000358389 A6NED7 52 aa7.56□□□□□ -1.2
CNOT3-202ENST00000358389 C19orf73Q9NVV2 129 aa7.56□□□□□ -1.2
CNOT3-202ENST00000358389 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
CNOT3-202ENST00000358389 CD164Q04900 197 aa7.55□□□□□ -1.2
CNOT3-202ENST00000358389 DHRS4-AS1Q9P1J3 65 aa7.55□□□□□ -1.2
CNOT3-202ENST00000358389 Q8N377 158 aa7.54□□□□□ -1.2
CNOT3-202ENST00000358389 X6R8D5 127 aa7.54□□□□□ -1.2
CNOT3-202ENST00000358389 HCG22E2RYF7 251 aa7.53□□□□□ -1.2
CNOT3-202ENST00000358389 A0A1W2PNM2 257 aa7.53□□□□□ -1.2
CNOT3-202ENST00000358389 A0A0G2JQZ4 141 aa7.52□□□□□ -1.21
CNOT3-202ENST00000358389 A0A1W2PNN7 141 aa7.52□□□□□ -1.21
CNOT3-202ENST00000358389 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
CNOT3-202ENST00000358389 BAHCC1Q9P281 2608 aa7.52□□□□□ -1.21
CNOT3-202ENST00000358389 FSHBP01225 129 aa7.52□□□□□ -1.21
CNOT3-202ENST00000358389 A0A087WSZ3 146 aa7.51□□□□□ -1.21
CNOT3-202ENST00000358389 PRLHP81277 87 aa7.51□□□□□ -1.21
CNOT3-202ENST00000358389 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
CNOT3-202ENST00000358389 KRTAP24-1Q3LI83 254 aa7.5□□□□□ -1.21
CNOT3-202ENST00000358389 ANK3Q12955 4377 aaKnown RBP7.5□□□□□ -1.21
CNOT3-202ENST00000358389 Q8NBF4 154 aa7.5□□□□□ -1.21
CNOT3-202ENST00000358389 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
CNOT3-202ENST00000358389 DSCR10P59022 87 aa7.48□□□□□ -1.21
CNOT3-202ENST00000358389 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
CNOT3-202ENST00000358389 Q5VV11 94 aa7.47□□□□□ -1.21
CNOT3-202ENST00000358389 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.21
CNOT3-202ENST00000358389 H0Y9P7 68 aa7.46□□□□□ -1.22
CNOT3-202ENST00000358389 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.22
CNOT3-202ENST00000358389 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
CNOT3-202ENST00000358389 RBM12B-AS1Q9P1G2 102 aa7.46□□□□□ -1.22
CNOT3-202ENST00000358389 REG3GQ6UW15 175 aa7.45□□□□□ -1.22
CNOT3-202ENST00000358389 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
CNOT3-202ENST00000358389 PRR34Q9NV39 138 aa7.45□□□□□ -1.22
CNOT3-202ENST00000358389 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
CNOT3-202ENST00000358389 CYP4F30PQ9H0H9 118 aa7.45□□□□□ -1.22
CNOT3-202ENST00000358389 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
CNOT3-202ENST00000358389 C16orf90A8MZG2 172 aa7.44□□□□□ -1.22
CNOT3-202ENST00000358389 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
CNOT3-202ENST00000358389 PCOTHQ58A44 107 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms