RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 TRAV10A0A0B4J240 114 aa5.43□□□□□ -1.54
CD46-205ENST00000358170 ELOF1P60002 83 aaKnown RBP5.43□□□□□ -1.54
CD46-205ENST00000358170 C7orf33Q8WU49 177 aa5.42□□□□□ -1.54
CD46-205ENST00000358170 LINC01556Q5JQF7 62 aa5.42□□□□□ -1.54
CD46-205ENST00000358170 LINC00588Q9Y4M8 146 aa5.42□□□□□ -1.54
CD46-205ENST00000358170 UBE2BP63146 152 aa5.41□□□□□ -1.54
CD46-205ENST00000358170 ST20-AS1Q8NBB2 130 aa5.41□□□□□ -1.54
CD46-205ENST00000358170 SRRM2Q9UQ35 2752 aaKnown RBP5.41□□□□□ -1.54
CD46-205ENST00000358170 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.4□□□□□ -1.54
CD46-205ENST00000358170 A0A0G2JQZ4 141 aa5.4□□□□□ -1.54
CD46-205ENST00000358170 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.54
CD46-205ENST00000358170 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
CD46-205ENST00000358170 CRYGAP11844 174 aa5.4□□□□□ -1.54
CD46-205ENST00000358170 LINC00528Q8N1L1 170 aa5.4□□□□□ -1.55
CD46-205ENST00000358170 NREPQ16612 68 aa5.39□□□□□ -1.55
CD46-205ENST00000358170 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
CD46-205ENST00000358170 WIPF1O43516 503 aa5.39□□□□□ -1.55
CD46-205ENST00000358170 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
CD46-205ENST00000358170 H3BNG1 76 aa5.39□□□□□ -1.55
CD46-205ENST00000358170 BPY2O14599 106 aa5.38□□□□□ -1.55
CD46-205ENST00000358170 PSCAO43653 123 aa5.38□□□□□ -1.55
CD46-205ENST00000358170 PDE6GP18545 87 aa5.37□□□□□ -1.55
CD46-205ENST00000358170 RMI2Q96E14 147 aa5.37□□□□□ -1.55
CD46-205ENST00000358170 TRBV7-4A0A0J9YYF1 115 aa5.37□□□□□ -1.55
CD46-205ENST00000358170 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
CD46-205ENST00000358170 TM2D3Q9BRN9 247 aa5.37□□□□□ -1.55
CD46-205ENST00000358170 J3KT08 172 aa5.36□□□□□ -1.55
CD46-205ENST00000358170 UBE2DNLQ8IWF7 75 aa5.36□□□□□ -1.55
CD46-205ENST00000358170 Q8N377 158 aa5.36□□□□□ -1.55
CD46-205ENST00000358170 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
CD46-205ENST00000358170 DNAH10OSP0CZ25 163 aa5.36□□□□□ -1.55
CD46-205ENST00000358170 HIGD2AQ9BW72 106 aa5.36□□□□□ -1.55
CD46-205ENST00000358170 DEFB116Q30KQ4 102 aa5.35□□□□□ -1.55
CD46-205ENST00000358170 A0A096LNI7 61 aa5.35□□□□□ -1.55
CD46-205ENST00000358170 K7EIL1 84 aa5.35□□□□□ -1.55
CD46-205ENST00000358170 PRLHP81277 87 aa5.35□□□□□ -1.55
CD46-205ENST00000358170 Q9BRP9 147 aa5.34□□□□□ -1.55
CD46-205ENST00000358170 KCNQ1DNQ9H478 68 aa5.33□□□□□ -1.56
CD46-205ENST00000358170 COL7A1Q02388 2944 aa5.33□□□□□ -1.56
CD46-205ENST00000358170 FUSP35637 526 aaKnown RBP eCLIP5.33□□□□□ -1.561e-7■□□□□ 9.4
CD46-205ENST00000358170 TMEM258P61165 79 aa5.33□□□□□ -1.56
CD46-205ENST00000358170 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
CD46-205ENST00000358170 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
CD46-205ENST00000358170 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
CD46-205ENST00000358170 Q6ZRX8 168 aa5.33□□□□□ -1.56
CD46-205ENST00000358170 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 TRBV7-6A0A0J9YX20 115 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 F8WEM9 126 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 H3BQ85 93 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 IGLV1-50A0A075B6I6 118 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 CXCL6P80162 114 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 KRTAP7-1Q8IUC3 87 aa5.32□□□□□ -1.56
CD46-205ENST00000358170 OXTP01178 125 aa5.31□□□□□ -1.56
CD46-205ENST00000358170 KRTAP1-5Q9BYS1 174 aa5.31□□□□□ -1.56
CD46-205ENST00000358170 FAM30AQ9NZY2 134 aa5.31□□□□□ -1.56
CD46-205ENST00000358170 FAM236DA0A1B0GTK5 79 aa5.3□□□□□ -1.56
CD46-205ENST00000358170 A0A1W2PNM2 257 aa5.3□□□□□ -1.56
CD46-205ENST00000358170 FAM236CP0DP71 79 aa5.3□□□□□ -1.56
CD46-205ENST00000358170 DHRS4-AS1Q9P1J3 65 aa5.3□□□□□ -1.56
CD46-205ENST00000358170 REG3GQ6UW15 175 aa5.29□□□□□ -1.56
CD46-205ENST00000358170 C4orf26Q17RF5 130 aa5.28□□□□□ -1.56
CD46-205ENST00000358170 H7BZZ5 65 aa5.28□□□□□ -1.56
CD46-205ENST00000358170 IGKV4-1P06312 121 aa5.28□□□□□ -1.56
CD46-205ENST00000358170 DNAH10Q8IVF4 4471 aa5.28□□□□□ -1.56
CD46-205ENST00000358170 LYSTQ99698 3801 aa5.27□□□□□ -1.57
CD46-205ENST00000358170 PRYO14603 147 aa5.27□□□□□ -1.57
CD46-205ENST00000358170 PHF5AQ7RTV0 110 aaKnown RBP5.27□□□□□ -1.57
CD46-205ENST00000358170 SMIM29Q86T20 159 aa5.27□□□□□ -1.57
CD46-205ENST00000358170 HRCT1Q6UXD1 115 aa5.27□□□□□ -1.57
CD46-205ENST00000358170 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
CD46-205ENST00000358170 WFDC13Q8IUB5 93 aa5.25□□□□□ -1.57
CD46-205ENST00000358170 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
CD46-205ENST00000358170 A0A087WSZ3 146 aa5.25□□□□□ -1.57
CD46-205ENST00000358170 TLX1NBP0CAT3 122 aa5.25□□□□□ -1.57
CD46-205ENST00000358170 PRR4Q16378 134 aa5.25□□□□□ -1.57
CD46-205ENST00000358170 HUWE1Q7Z6Z7 4374 aaKnown RBP5.25□□□□□ -1.57
CD46-205ENST00000358170 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
CD46-205ENST00000358170 F8WDY8 70 aa5.24□□□□□ -1.57
CD46-205ENST00000358170 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
CD46-205ENST00000358170 K7EQZ3 153 aa5.24□□□□□ -1.57
CD46-205ENST00000358170 Q8NBF4 154 aa5.24□□□□□ -1.57
CD46-205ENST00000358170 UBE2AP49459 152 aa5.24□□□□□ -1.57
CD46-205ENST00000358170 RPL37AP61513 92 aaKnown RBP5.24□□□□□ -1.57
CD46-205ENST00000358170 LRCOL1A6NCL2 159 aa5.24□□□□□ -1.57
CD46-205ENST00000358170 TGP01266 2768 aa5.23□□□□□ -1.57
CD46-205ENST00000358170 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
CD46-205ENST00000358170 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
CD46-205ENST00000358170 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
CD46-205ENST00000358170 SPRR1AP35321 89 aa5.22□□□□□ -1.57
CD46-205ENST00000358170 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
CD46-205ENST00000358170 KLKP1Q107X0 134 aa5.22□□□□□ -1.57
CD46-205ENST00000358170 IGFL1Q6UW32 110 aa5.22□□□□□ -1.57
CD46-205ENST00000358170 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.57
CD46-205ENST00000358170 MDFIQ99750 246 aa5.21□□□□□ -1.57
CD46-205ENST00000358170 PLA2G2DQ9UNK4 145 aa5.21□□□□□ -1.57
CD46-205ENST00000358170 C16orf90A8MZG2 172 aa5.21□□□□□ -1.58
CD46-205ENST00000358170 LINC00474Q9P2X8 69 aa5.21□□□□□ -1.58
CD46-205ENST00000358170 EPM2AB3EWF7 344 aa5.21□□□□□ -1.58
CD46-205ENST00000358170 DSCR10P59022 87 aa5.2□□□□□ -1.58
CD46-205ENST00000358170 OCR1Q9BZK8 76 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms