RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 IGKV2D-28P01615 120 aa3.2□□□□□ -1.9
SYNE2-203ENST00000357395 LINC00313P59037 77 aa3.2□□□□□ -1.9
SYNE2-203ENST00000357395 C16orf95Q9H693 158 aa3.2□□□□□ -1.9
SYNE2-203ENST00000357395 COL4A3Q01955 1670 aa3.2□□□□□ -1.9
SYNE2-203ENST00000357395 LINC00588Q9Y4M8 146 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 BAHCC1Q9P281 2608 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 TRIOO75962 3097 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 A8MTW9 85 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 LINC00528Q8N1L1 170 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 PRR34Q9NV39 138 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 DEFB135Q30KP9 77 aa3.19□□□□□ -1.9
SYNE2-203ENST00000357395 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
SYNE2-203ENST00000357395 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
SYNE2-203ENST00000357395 MUC22E2RYF6 1773 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-203ENST00000357395 IGLV1-51P01701 117 aa3.18□□□□□ -1.9
SYNE2-203ENST00000357395 A0A1B0GVX0 72 aa3.18□□□□□ -1.9
SYNE2-203ENST00000357395 C10orf142B7Z368 130 aa3.18□□□□□ -1.9
SYNE2-203ENST00000357395 LINC00476Q8WZB0 136 aa3.17□□□□□ -1.9
SYNE2-203ENST00000357395 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
SYNE2-203ENST00000357395 INAFM1C9JVW0 142 aa3.17□□□□□ -1.9
SYNE2-203ENST00000357395 BBC3Q96PG8 261 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-203ENST00000357395 TEP1Q99973 2627 aaKnown RBP3.17□□□□□ -1.9
SYNE2-203ENST00000357395 IGLV5-37A0A075B6J1 123 aa3.17□□□□□ -1.9
SYNE2-203ENST00000357395 LINC01006Q8NI28 216 aa3.17□□□□□ -1.9
SYNE2-203ENST00000357395 FLNBO75369 2602 aaKnown RBP3.17□□□□□ -1.9
SYNE2-203ENST00000357395 CFAP46Q8IYW2 2715 aa3.16□□□□□ -1.9
SYNE2-203ENST00000357395 DNAH10OSP0CZ25 163 aa3.16□□□□□ -1.9
SYNE2-203ENST00000357395 FP248Q71RG6 208 aaPredicted RBP3.16□□□□□ -1.9
SYNE2-203ENST00000357395 COL27A1Q8IZC6 1860 aaPredicted RBP3.16□□□□□ -1.9
SYNE2-203ENST00000357395 PLA2G2AP14555 144 aa3.16□□□□□ -1.9
SYNE2-203ENST00000357395 DEFB136Q30KP8 78 aa3.16□□□□□ -1.9
SYNE2-203ENST00000357395 LY6G6CO95867 125 aa3.15□□□□□ -1.9
SYNE2-203ENST00000357395 TNRC18O15417 2968 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-203ENST00000357395 IGLV9-49A0A0B4J1Y8 123 aa3.14□□□□□ -1.91
SYNE2-203ENST00000357395 ODF3L2Q3SX64 289 aa3.14□□□□□ -1.91
SYNE2-203ENST00000357395 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-203ENST00000357395 K7EQZ3 153 aa3.14□□□□□ -1.91
SYNE2-203ENST00000357395 UBR5O95071 2799 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-203ENST00000357395 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
SYNE2-203ENST00000357395 FRYQ5TBA9 3013 aa3.14□□□□□ -1.91
SYNE2-203ENST00000357395 COL4A1P02462 1669 aa3.14□□□□□ -1.91
SYNE2-203ENST00000357395 GCN1Q92616 2671 aaKnown RBP3.14□□□□□ -1.91
SYNE2-203ENST00000357395 PLA2G1BP04054 148 aaKnown RBP3.13□□□□□ -1.91
SYNE2-203ENST00000357395 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 REV3LO60673 3130 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 Q8NA96 180 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 COL4A5P29400 1685 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 NSD1Q96L73 2696 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-203ENST00000357395 MGAQ8IWI9 3026 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 Q5VV11 94 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 Q6ZSN1 163 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 PCNTO95613 3336 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
SYNE2-203ENST00000357395 NBEAQ8NFP9 2946 aa3.12□□□□□ -1.91
SYNE2-203ENST00000357395 ZNF292O60281 2723 aa3.12□□□□□ -1.91
SYNE2-203ENST00000357395 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
SYNE2-203ENST00000357395 DSPP15924 2871 aaKnown RBP3.12□□□□□ -1.91
SYNE2-203ENST00000357395 PRUNE2Q8WUY3 3088 aa3.12□□□□□ -1.91
SYNE2-203ENST00000357395 VPS13AQ96RL7 3174 aa3.11□□□□□ -1.91
SYNE2-203ENST00000357395 PRLHP81277 87 aa3.11□□□□□ -1.91
SYNE2-203ENST00000357395 IGLV5-52A0A0A0MRZ9 124 aa3.11□□□□□ -1.91
SYNE2-203ENST00000357395 DEFB116Q30KQ4 102 aa3.11□□□□□ -1.91
SYNE2-203ENST00000357395 A0A096LNI7 61 aa3.11□□□□□ -1.91
SYNE2-203ENST00000357395 CNBPP62633 177 aaKnown RBP3.1□□□□□ -1.91
SYNE2-203ENST00000357395 CIRBP-AS1Q8TBR5 109 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 ITPR1Q14643 2758 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 DEFB4AO15263 64 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 IGKV2D-30A0A075B6S6 120 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 IGKV2-30P06310 120 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 ITPR3Q14573 2671 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 COL4A2P08572 1712 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 ASH1LQ9NR48 2969 aaKnown RBP3.1□□□□□ -1.91
SYNE2-203ENST00000357395 IGSF10Q6WRI0 2623 aa3.1□□□□□ -1.91
SYNE2-203ENST00000357395 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
SYNE2-203ENST00000357395 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
SYNE2-203ENST00000357395 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
SYNE2-203ENST00000357395 C5orf42Q9H799 3197 aa3.09□□□□□ -1.91
SYNE2-203ENST00000357395 LCE6AA0A183 80 aa3.09□□□□□ -1.92
SYNE2-203ENST00000357395 A0A1B0GU33 70 aa3.09□□□□□ -1.92
SYNE2-203ENST00000357395 ADGRG4Q8IZF6 3080 aa3.09□□□□□ -1.92
SYNE2-203ENST00000357395 LINC00612Q8N6U2 182 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 C1orf134Q5TEV5 83 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 Q6ZR54 194 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 MAPK1IP1LQ8NDC0 245 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 M0R2N4 97 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 KALRNO60229 2985 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 SPINK1P00995 79 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 TEX15Q9BXT5 2789 aa3.08□□□□□ -1.92
SYNE2-203ENST00000357395 J3QKU1 62 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 FLNAP21333 2647 aaKnown RBP3.07□□□□□ -1.92
SYNE2-203ENST00000357395 Q8N377 158 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 CSNK1G2-AS1Q8NCQ2 148 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 ROMO1P60602 79 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 DMXL2Q8TDJ6 3036 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 HRES1P13985 223 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 ST20-AS1Q8NBB2 130 aa3.07□□□□□ -1.92
SYNE2-203ENST00000357395 GOLGB1Q14789 3259 aaKnown RBP3.06□□□□□ -1.92
SYNE2-203ENST00000357395 SETXQ7Z333 2677 aaKnown RBP3.05□□□□□ -1.92
SYNE2-203ENST00000357395 FAM229BQ4G0N7 80 aa3.05□□□□□ -1.92
SYNE2-203ENST00000357395 A0A1W2PNU3 283 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms